RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W TTI1P36097 1038 aa2.65□□□□□ -1.99
HER1YOR227W VPS29P38759 282 aa2.65□□□□□ -1.99
HER1YOR227W ALD2P47771 506 aa2.65□□□□□ -1.99
HER1YOR227W NOP7P53261 605 aaKnown RBP2.65□□□□□ -1.99
HER1YOR227W MRM1P25270 412 aa2.64□□□□□ -1.99
HER1YOR227W REF2P42073 533 aaPredicted RBP2.64□□□□□ -1.99
HER1YOR227W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
HER1YOR227W CPS1P27614 576 aa2.64□□□□□ -1.99
HER1YOR227W PUP1P25043 261 aa2.64□□□□□ -1.99
HER1YOR227W HAA1Q12753 694 aaKnown RBP2.64□□□□□ -1.99
HER1YOR227W HEM3P28789 327 aa2.63□□□□□ -1.99
HER1YOR227W YJL007CP47080 104 aa2.63□□□□□ -1.99
HER1YOR227W BIO2P32451 375 aa2.63□□□□□ -1.99
HER1YOR227W BRL1P38770 471 aa2.63□□□□□ -1.99
HER1YOR227W ATE1P16639 503 aa2.63□□□□□ -1.99
HER1YOR227W BRN1P38170 754 aa2.63□□□□□ -1.99
HER1YOR227W NUG1P40010 520 aaKnown RBP2.63□□□□□ -1.99
HER1YOR227W ALD4P46367 519 aaKnown RBP2.63□□□□□ -1.99
HER1YOR227W RAD9P14737 1309 aa2.63□□□□□ -1.99
HER1YOR227W SSA4P22202 642 aaKnown RBP2.62□□□□□ -1.99
HER1YOR227W MAP2P38174 421 aaKnown RBP2.62□□□□□ -1.99
HER1YOR227W HGH1P48362 394 aaKnown RBP2.62□□□□□ -1.99
HER1YOR227W UBP14P38237 781 aaKnown RBP2.62□□□□□ -1.99
HER1YOR227W THI12P42883 340 aa2.62□□□□□ -1.99
HER1YOR227W THI5P43534 340 aa2.62□□□□□ -1.99
HER1YOR227W THI11P47183 340 aa2.62□□□□□ -1.99
HER1YOR227W MAG2Q06436 670 aaKnown RBP2.62□□□□□ -1.99
HER1YOR227W THI13Q07748 340 aa2.62□□□□□ -1.99
HER1YOR227W FAS2P19097 1887 aaKnown RBP2.61□□□□□ -1.99
HER1YOR227W CDC3P32457 520 aaKnown RBP2.61□□□□□ -1.99
HER1YOR227W SCY1P53009 804 aa2.61□□□□□ -1.99
HER1YOR227W YNR029CP53729 429 aaKnown RBP2.61□□□□□ -1.99
HER1YOR227W RTG3P38165 486 aa2.61□□□□□ -1.99
HER1YOR227W NOP53Q12080 455 aaKnown RBP2.61□□□□□ -1.99
HER1YOR227W SIR4P11978 1358 aa2.61□□□□□ -1.99
HER1YOR227W GSC2P40989 1895 aa2.6□□□□□ -1.99
HER1YOR227W BDF1P35817 686 aa2.6□□□□□ -1.99
HER1YOR227W CST6P40535 587 aa2.6□□□□□ -1.99
HER1YOR227W YRB30P53107 440 aaPredicted RBP2.6□□□□□ -1.99
HER1YOR227W HAT1Q12341 374 aa2.6□□□□□ -1.99
HER1YOR227W STB3Q12427 513 aa2.6□□□□□ -1.99
HER1YOR227W PMD1P32634 1753 aa2.6□□□□□ -1.99
HER1YOR227W TRL1P09880 827 aaKnown RBP2.6□□□□□ -1.99
HER1YOR227W STS1P38637 319 aa2.6□□□□□ -1.99
HER1YOR227W EPS1P40557 701 aa2.6□□□□□ -1.99
HER1YOR227W YJR008WP47085 338 aa2.6□□□□□ -1.99
HER1YOR227W ATF2P53296 535 aa2.6□□□□□ -1.99
HER1YOR227W KRE5P22023 1365 aa2.6□□□□□ -1.99
HER1YOR227W SUP45P12385 437 aaKnown RBP2.59□□□□□ -1.99
HER1YOR227W CSN12P47130 423 aa2.59□□□□□ -1.99
HER1YOR227W MRX10Q05648 414 aa2.59□□□□□ -1.99
HER1YOR227W WHI5Q12416 295 aa2.59□□□□□ -1.99
HER1YOR227W AUS1Q08409 1394 aa2.59□□□□□ -1.99
HER1YOR227W UBX5Q06682 500 aa2.59□□□□□ -1.99
HER1YOR227W SLD2P34252 453 aa2.59□□□□□ -2
HER1YOR227W TPS3P38426 1054 aaKnown RBP2.58□□□□□ -2
HER1YOR227W YAF9P53930 226 aa2.58□□□□□ -2
HER1YOR227W TYW1Q08960 810 aaKnown RBP2.58□□□□□ -2
HER1YOR227W YRF1-4O13559 1382 aa2.58□□□□□ -2
HER1YOR227W ROM2P51862 1356 aaKnown RBP2.58□□□□□ -2
HER1YOR227W KEX1P09620 729 aa2.58□□□□□ -2
HER1YOR227W RSF2P46974 1380 aa2.58□□□□□ -2
HER1YOR227W IOC3P43596 787 aa2.57□□□□□ -2
HER1YOR227W SSA2P10592 639 aaKnown RBP2.57□□□□□ -2
HER1YOR227W RTG2P32608 588 aaKnown RBP2.57□□□□□ -2
HER1YOR227W RRD1P40454 393 aaKnown RBP2.57□□□□□ -2
HER1YOR227W YLR326WQ06170 240 aaKnown RBP2.57□□□□□ -2
HER1YOR227W MDJ2P42834 146 aa2.57□□□□□ -2
HER1YOR227W BBC1P47068 1157 aa2.57□□□□□ -2
HER1YOR227W BUD21Q08492 214 aaPredicted RBP2.57□□□□□ -2
HER1YOR227W YPR204WQ08995 1032 aa2.57□□□□□ -2
HER1YOR227W RDS2P19541 446 aaKnown RBP2.56□□□□□ -2
HER1YOR227W PEP12P32854 288 aa2.56□□□□□ -2
HER1YOR227W RTS3P53289 263 aa2.56□□□□□ -2
HER1YOR227W MDG1P53885 366 aa2.56□□□□□ -2
HER1YOR227W PIB1Q06651 286 aa2.56□□□□□ -2
HER1YOR227W GIN4Q12263 1142 aa2.56□□□□□ -2
HER1YOR227W ENO1P00924 437 aaKnown RBP2.56□□□□□ -2
HER1YOR227W PDR1P12383 1068 aa2.56□□□□□ -2
HER1YOR227W NMD2P38798 1089 aaKnown RBP2.56□□□□□ -2
HER1YOR227W ERP5P38819 212 aa2.56□□□□□ -2
HER1YOR227W RNH70P53331 553 aa2.56□□□□□ -2
HER1YOR227W YNL108CP53929 270 aa2.56□□□□□ -2
HER1YOR227W MSC6Q08818 692 aaKnown RBP2.56□□□□□ -2
HER1YOR227W CIT2P08679 460 aa2.56□□□□□ -2
HER1YOR227W YMR074CQ04773 145 aa2.56□□□□□ -2
HER1YOR227W YDJ1P25491 409 aaKnown RBP2.55□□□□□ -2
HER1YOR227W PTC3P34221 468 aaKnown RBP2.55□□□□□ -2
HER1YOR227W ENP1P38333 483 aaKnown RBP2.55□□□□□ -2
HER1YOR227W PMC1P38929 1173 aaPredicted RBP2.55□□□□□ -2
HER1YOR227W BUD6P41697 788 aa2.55□□□□□ -2
HER1YOR227W OSW7P43611 510 aa2.55□□□□□ -2
HER1YOR227W FPR4Q06205 392 aaPredicted RBP2.55□□□□□ -2
HER1YOR227W ENO2P00925 437 aaKnown RBP2.55□□□□□ -2
HER1YOR227W PSE1P32337 1089 aaKnown RBP2.55□□□□□ -2
HER1YOR227W RIM21P48565 533 aa2.55□□□□□ -2
HER1YOR227W TGL4P36165 910 aa2.55□□□□□ -2
HER1YOR227W TAT2P38967 592 aa2.55□□□□□ -2
HER1YOR227W RPL34AP87262 121 aaPredicted RBP2.55□□□□□ -2
HER1YOR227W YBL113CQ7M4S9 792 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms