RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C EMP47P43555 445 aa4.68□□□□□ -1.66
RPB11YOL005C NAF1P53919 492 aaKnown RBP4.68□□□□□ -1.66
RPB11YOL005C ITT1Q04638 464 aa4.68□□□□□ -1.66
RPB11YOL005C IXR1P33417 597 aa4.67□□□□□ -1.66
RPB11YOL005C STE20Q03497 939 aaKnown RBP4.67□□□□□ -1.66
RPB11YOL005C ENO1P00924 437 aaKnown RBP4.66□□□□□ -1.66
RPB11YOL005C RAS1P01119 309 aa4.66□□□□□ -1.66
RPB11YOL005C DPS1P04802 557 aaKnown RBP4.66□□□□□ -1.66
RPB11YOL005C VAC17P25591 423 aa4.66□□□□□ -1.66
RPB11YOL005C GUT2P32191 649 aa4.66□□□□□ -1.66
RPB11YOL005C YPP1P46951 817 aa4.66□□□□□ -1.66
RPB11YOL005C SYH1Q02875 849 aaKnown RBP4.66□□□□□ -1.66
RPB11YOL005C CPS1P27614 576 aa4.65□□□□□ -1.67
RPB11YOL005C TPD3P31383 635 aa4.65□□□□□ -1.67
RPB11YOL005C ENV9Q08651 330 aa4.65□□□□□ -1.67
RPB11YOL005C RIM21P48565 533 aa4.64□□□□□ -1.67
RPB11YOL005C APP1P53933 587 aa4.64□□□□□ -1.67
RPB11YOL005C KTR7P40504 517 aa4.63□□□□□ -1.67
RPB11YOL005C CLA4P48562 842 aa4.62□□□□□ -1.67
RPB11YOL005C FRA1Q07825 749 aa4.62□□□□□ -1.67
RPB11YOL005C SSA4P22202 642 aaKnown RBP4.61□□□□□ -1.67
RPB11YOL005C SOH1P38633 127 aa4.61□□□□□ -1.67
RPB11YOL005C YPR084WQ06821 456 aa4.61□□□□□ -1.67
RPB11YOL005C TTI1P36097 1038 aa4.6□□□□□ -1.67
RPB11YOL005C ATG3P40344 310 aa4.6□□□□□ -1.67
RPB11YOL005C AIR1P40507 360 aaKnown RBP4.6□□□□□ -1.67
RPB11YOL005C MRX10Q05648 414 aa4.6□□□□□ -1.67
RPB11YOL005C MRX12P47084 519 aa4.59□□□□□ -1.67
RPB11YOL005C HED1Q03937 162 aa4.59□□□□□ -1.67
RPB11YOL005C ISR1Q06098 443 aaKnown RBP4.59□□□□□ -1.67
RPB11YOL005C RDS2P19541 446 aaKnown RBP4.58□□□□□ -1.68
RPB11YOL005C ATG20Q07528 640 aa4.58□□□□□ -1.68
RPB11YOL005C MIP1P15801 1254 aa4.56□□□□□ -1.68
RPB11YOL005C MKS1P34072 584 aa4.56□□□□□ -1.68
RPB11YOL005C SIS2P36024 562 aa4.56□□□□□ -1.68
RPB11YOL005C HST3P53687 447 aa4.56□□□□□ -1.68
RPB11YOL005C ECM23Q02710 187 aa4.56□□□□□ -1.68
RPB11YOL005C SUB2Q07478 446 aaKnown RBP4.56□□□□□ -1.68
RPB11YOL005C TGL4P36165 910 aa4.55□□□□□ -1.68
RPB11YOL005C EMW1P42842 904 aaKnown RBP4.55□□□□□ -1.68
RPB11YOL005C MET32Q12041 191 aa4.55□□□□□ -1.68
RPB11YOL005C CDC4P07834 779 aa4.54□□□□□ -1.68
RPB11YOL005C UGA3P26370 528 aa4.54□□□□□ -1.68
RPB11YOL005C ASH1P34233 588 aa4.54□□□□□ -1.68
RPB11YOL005C DFG5Q05031 458 aa4.54□□□□□ -1.68
RPB11YOL005C CBC2Q08920 208 aaKnown RBP RIP-Chip data4.54□□□□□ -1.68not detected
RPB11YOL005C DAT1P13483 248 aaKnown RBP4.53□□□□□ -1.68
RPB11YOL005C PEP12P32854 288 aa4.53□□□□□ -1.68
RPB11YOL005C HAL5P38970 855 aaKnown RBP4.53□□□□□ -1.68
RPB11YOL005C RPL34AP87262 121 aaPredicted RBP4.53□□□□□ -1.68
RPB11YOL005C YML083CQ04526 418 aa4.53□□□□□ -1.68
RPB11YOL005C SSA1P10591 642 aaKnown RBP4.52□□□□□ -1.69
RPB11YOL005C PDI1P17967 522 aaKnown RBP4.52□□□□□ -1.69
RPB11YOL005C PUP1P25043 261 aa4.52□□□□□ -1.69
RPB11YOL005C FBP26P32604 452 aa4.52□□□□□ -1.69
RPB11YOL005C MRT4P33201 236 aaKnown RBP4.52□□□□□ -1.69
RPB11YOL005C UBX7P38349 436 aa4.52□□□□□ -1.69
RPB11YOL005C APL6P46682 809 aa4.52□□□□□ -1.69
RPB11YOL005C ISU1Q03020 165 aa4.52□□□□□ -1.69
RPB11YOL005C UTP13Q05946 817 aaKnown RBP4.52□□□□□ -1.69
RPB11YOL005C HDA3Q06623 655 aa4.52□□□□□ -1.69
RPB11YOL005C BDS1Q08347 646 aa4.52□□□□□ -1.69
RPB11YOL005C SRF1Q12516 437 aa4.52□□□□□ -1.69
RPB11YOL005C TRK1P12685 1235 aa4.51□□□□□ -1.69
RPB11YOL005C GAL2P13181 574 aa4.51□□□□□ -1.69
RPB11YOL005C UTR2P32623 467 aa4.51□□□□□ -1.69
RPB11YOL005C YBL086CP38177 466 aa4.51□□□□□ -1.69
RPB11YOL005C AIM9P40053 627 aaKnown RBP4.51□□□□□ -1.69
RPB11YOL005C NOB1Q08444 459 aaKnown RBP4.51□□□□□ -1.69
RPB11YOL005C AFT1P22149 690 aa4.5□□□□□ -1.69
RPB11YOL005C PHO87P25360 923 aa4.5□□□□□ -1.69
RPB11YOL005C TBS1P38114 1094 aa4.5□□□□□ -1.69
RPB11YOL005C RPP2BP02400 110 aaKnown RBP4.49□□□□□ -1.69
RPB11YOL005C DLD3P39976 496 aaKnown RBP4.49□□□□□ -1.69
RPB11YOL005C YFL034WP43564 1073 aa4.49□□□□□ -1.69
RPB11YOL005C ACS2P52910 683 aaKnown RBP4.49□□□□□ -1.69
RPB11YOL005C HAP4P14064 554 aa4.48□□□□□ -1.69
RPB11YOL005C NTH2P35172 780 aa4.48□□□□□ -1.69
RPB11YOL005C TSC13Q99190 310 aa4.48□□□□□ -1.69
RPB11YOL005C GEF1P37020 779 aa4.47□□□□□ -1.69
RPB11YOL005C UTP7P40055 554 aaKnown RBP4.47□□□□□ -1.69
RPB11YOL005C YJR115WP47152 169 aa4.47□□□□□ -1.69
RPB11YOL005C MSB3P48566 633 aaPredicted RBP4.47□□□□□ -1.69
RPB11YOL005C WTM2Q12206 467 aa4.47□□□□□ -1.69
RPB11YOL005C ARG82P07250 355 aa4.46□□□□□ -1.7
RPB11YOL005C RPS6AP0CX37 236 aaKnown RBP4.46□□□□□ -1.7
RPB11YOL005C RPS6BP0CX38 236 aaPredicted RBP4.46□□□□□ -1.7
RPB11YOL005C STE6P12866 1290 aa4.46□□□□□ -1.7
RPB11YOL005C PTK2P47116 818 aaKnown RBP4.46□□□□□ -1.7
RPB11YOL005C SRC1Q03707 834 aa4.46□□□□□ -1.7
RPB11YOL005C SPT2P06843 333 aaPredicted RBP4.45□□□□□ -1.7
RPB11YOL005C BRE2P43132 505 aa4.45□□□□□ -1.7
RPB11YOL005C ROM1P53046 1155 aa4.45□□□□□ -1.7
RPB11YOL005C GCR2Q01722 534 aa4.45□□□□□ -1.7
RPB11YOL005C GAS4Q08271 471 aa4.45□□□□□ -1.7
RPB11YOL005C SWI5P08153 709 aa4.44□□□□□ -1.7
RPB11YOL005C VAN1P23642 535 aa4.44□□□□□ -1.7
RPB11YOL005C DLD1P32891 587 aa4.44□□□□□ -1.7
RPB11YOL005C SLX8P40072 274 aa4.44□□□□□ -1.7
RPB11YOL005C RTT106P40161 455 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms