RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W RPA14P50106 137 aa5.48□□□□□ -1.53
VPS27YNR006W YML082WQ04533 649 aaKnown RBP5.48□□□□□ -1.53
VPS27YNR006W PRT1P06103 763 aaKnown RBP5.47□□□□□ -1.53
VPS27YNR006W PUP1P25043 261 aa5.47□□□□□ -1.53
VPS27YNR006W MCM16Q12262 181 aa5.47□□□□□ -1.53
VPS27YNR006W YPR097WQ06839 1073 aa5.47□□□□□ -1.53
VPS27YNR006W HAT1Q12341 374 aa5.47□□□□□ -1.53
VPS27YNR006W YTA7P40340 1379 aa5.47□□□□□ -1.53
VPS27YNR006W RDS2P19541 446 aaKnown RBP5.46□□□□□ -1.54
VPS27YNR006W BCK2P33306 851 aa5.46□□□□□ -1.54
VPS27YNR006W YPP1P46951 817 aa5.46□□□□□ -1.54
VPS27YNR006W SIS2P36024 562 aa5.45□□□□□ -1.54
VPS27YNR006W RRN7P40992 514 aa5.45□□□□□ -1.54
VPS27YNR006W PDC1P06169 563 aaKnown RBP5.45□□□□□ -1.54
VPS27YNR006W ISF1P32488 338 aa5.45□□□□□ -1.54
VPS27YNR006W PEP12P32854 288 aa5.45□□□□□ -1.54
VPS27YNR006W ALR1Q08269 859 aa5.45□□□□□ -1.54
VPS27YNR006W OCA5P38738 679 aa5.44□□□□□ -1.54
VPS27YNR006W FIG4P42837 879 aa5.43□□□□□ -1.54
VPS27YNR006W EMP47P43555 445 aa5.43□□□□□ -1.54
VPS27YNR006W YPR084WQ06821 456 aa5.43□□□□□ -1.54
VPS27YNR006W TGL4P36165 910 aa5.43□□□□□ -1.54
VPS27YNR006W TEC1P18412 486 aa5.42□□□□□ -1.54
VPS27YNR006W IPL1P38991 367 aa5.42□□□□□ -1.54
VPS27YNR006W PAT1P25644 796 aaKnown RBP5.41□□□□□ -1.54
VPS27YNR006W HXT10P43581 546 aa5.41□□□□□ -1.54
VPS27YNR006W KXD1P53158 218 aa5.41□□□□□ -1.54
VPS27YNR006W FRA1Q07825 749 aa5.41□□□□□ -1.54
VPS27YNR006W MOD5P07884 428 aa5.4□□□□□ -1.55
VPS27YNR006W TPD3P31383 635 aa5.4□□□□□ -1.55
VPS27YNR006W GUT2P32191 649 aa5.4□□□□□ -1.55
VPS27YNR006W SPT16P32558 1035 aaKnown RBP5.4□□□□□ -1.55
VPS27YNR006W BRN1P38170 754 aa5.4□□□□□ -1.55
VPS27YNR006W ALD2P47771 506 aa5.4□□□□□ -1.55
VPS27YNR006W RRP15Q06511 250 aaPredicted RBP5.4□□□□□ -1.55
VPS27YNR006W SPC42P36094 363 aa5.39□□□□□ -1.55
VPS27YNR006W DOS2P54858 310 aa5.39□□□□□ -1.55
VPS27YNR006W STE20Q03497 939 aaKnown RBP5.39□□□□□ -1.55
VPS27YNR006W VRP1P37370 817 aa5.39□□□□□ -1.55
VPS27YNR006W RRD1P40454 393 aaKnown RBP5.39□□□□□ -1.55
VPS27YNR006W APL6P46682 809 aa5.39□□□□□ -1.55
VPS27YNR006W ENV9Q08651 330 aa5.39□□□□□ -1.55
VPS27YNR006W VAC17P25591 423 aa5.38□□□□□ -1.55
VPS27YNR006W KTR7P40504 517 aa5.38□□□□□ -1.55
VPS27YNR006W SAS4Q04003 481 aa5.38□□□□□ -1.55
VPS27YNR006W ITT1Q04638 464 aa5.38□□□□□ -1.55
VPS27YNR006W TOP1P04786 769 aa5.37□□□□□ -1.55
VPS27YNR006W STM1P39015 273 aaKnown RBP5.37□□□□□ -1.55
VPS27YNR006W FAR11P53917 953 aa5.37□□□□□ -1.55
VPS27YNR006W GYP1Q08484 637 aa5.37□□□□□ -1.55
VPS27YNR006W ASF1P32447 279 aa5.37□□□□□ -1.55
VPS27YNR006W ECM23Q02710 187 aa5.37□□□□□ -1.55
VPS27YNR006W YBL113CQ7M4S9 792 aa5.36□□□□□ -1.55
VPS27YNR006W GAL2P13181 574 aa5.35□□□□□ -1.55
VPS27YNR006W XDJ1P39102 459 aa5.35□□□□□ -1.55
VPS27YNR006W SOH1P38633 127 aa5.34□□□□□ -1.55
VPS27YNR006W ERP5P38819 212 aa5.34□□□□□ -1.55
VPS27YNR006W ATG3P40344 310 aa5.34□□□□□ -1.55
VPS27YNR006W UTP13Q05946 817 aaKnown RBP5.34□□□□□ -1.55
VPS27YNR006W ATE1P16639 503 aa5.34□□□□□ -1.55
VPS27YNR006W SDH2P21801 266 aa5.34□□□□□ -1.55
VPS27YNR006W SEC20P28791 383 aa5.34□□□□□ -1.55
VPS27YNR006W ALD4P46367 519 aaKnown RBP5.34□□□□□ -1.55
VPS27YNR006W ATG36P46983 293 aa5.33□□□□□ -1.56
VPS27YNR006W MSC6Q08818 692 aaKnown RBP5.33□□□□□ -1.56
VPS27YNR006W IXR1P33417 597 aa5.32□□□□□ -1.56
VPS27YNR006W UBX7P38349 436 aa5.32□□□□□ -1.56
VPS27YNR006W TRL1P09880 827 aaKnown RBP5.31□□□□□ -1.56
VPS27YNR006W PHO87P25360 923 aa5.31□□□□□ -1.56
VPS27YNR006W HAL5P38970 855 aaKnown RBP5.31□□□□□ -1.56
VPS27YNR006W FPR4Q06205 392 aaPredicted RBP5.31□□□□□ -1.56
VPS27YNR006W MRF1P30775 413 aaPredicted RBP5.3□□□□□ -1.56
VPS27YNR006W TPS3P38426 1054 aaKnown RBP5.3□□□□□ -1.56
VPS27YNR006W ACS2P52910 683 aaKnown RBP5.3□□□□□ -1.56
VPS27YNR006W WHI5Q12416 295 aa5.3□□□□□ -1.56
VPS27YNR006W BDP1P46678 594 aa5.3□□□□□ -1.56
VPS27YNR006W POL32P47110 350 aa5.3□□□□□ -1.56
VPS27YNR006W NNF1P47149 201 aa5.3□□□□□ -1.56
VPS27YNR006W YHL050CP38721 697 aa5.29□□□□□ -1.56
VPS27YNR006W YHR219WP38900 624 aa5.29□□□□□ -1.56
VPS27YNR006W CST6P40535 587 aa5.29□□□□□ -1.56
VPS27YNR006W ROM1P53046 1155 aa5.29□□□□□ -1.56
VPS27YNR006W YAF9P53930 226 aa5.29□□□□□ -1.56
VPS27YNR006W ISR1Q06098 443 aaKnown RBP5.29□□□□□ -1.56
VPS27YNR006W PUS5Q06244 254 aa5.29□□□□□ -1.56
VPS27YNR006W YEL077CQ3E7X8 1277 aa5.29□□□□□ -1.56
VPS27YNR006W HAP4P14064 554 aa5.28□□□□□ -1.56
VPS27YNR006W MDJ2P42834 146 aa5.28□□□□□ -1.56
VPS27YNR006W TSC13Q99190 310 aa5.28□□□□□ -1.56
VPS27YNR006W KIP2P28743 706 aa5.28□□□□□ -1.56
VPS27YNR006W CWC15Q03772 175 aaKnown RBP5.28□□□□□ -1.56
VPS27YNR006W SVF1Q05515 481 aa5.28□□□□□ -1.56
VPS27YNR006W ATG20Q07528 640 aa5.28□□□□□ -1.56
VPS27YNR006W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
VPS27YNR006W STB3Q12427 513 aa5.28□□□□□ -1.56
VPS27YNR006W PDI1P17967 522 aaKnown RBP5.27□□□□□ -1.57
VPS27YNR006W PPX1P38698 397 aa5.27□□□□□ -1.57
VPS27YNR006W NMD2P38798 1089 aaKnown RBP5.27□□□□□ -1.57
VPS27YNR006W MAG2Q06436 670 aaKnown RBP5.27□□□□□ -1.57
VPS27YNR006W EMW1P42842 904 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms