RNA–Protein interactions for RNA: YNL054W

VAC7, Transcript of Integral vacuolar membrane protein, yeast

Gene VAC7, Length 3,498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC7	YNL054W	NUP157	P40064	1391 aa	Known RBP	4.87	□□□□□ -1.63
VAC7	YNL054W	TAF8	Q03750	510 aa		4.87	□□□□□ -1.63
VAC7	YNL054W	ISW2	Q08773	1120 aa		4.87	□□□□□ -1.63
VAC7	YNL054W	RUD3	Q12234	484 aa	Known RBP	4.87	□□□□□ -1.63
VAC7	YNL054W	NOC2	P39744	710 aa	Known RBP	4.86	□□□□□ -1.63
VAC7	YNL054W	TAN1	P53072	289 aa	Predicted RBP	4.86	□□□□□ -1.63
VAC7	YNL054W	SPO1	P53541	631 aa		4.86	□□□□□ -1.63
VAC7	YNL054W	RAD9	P14737	1309 aa		4.86	□□□□□ -1.63
VAC7	YNL054W	RNR2	P09938	399 aa	Known RBP	4.86	□□□□□ -1.63
VAC7	YNL054W	ZUO1	P32527	433 aa	Known RBP	4.86	□□□□□ -1.63
VAC7	YNL054W	PBY1	P38254	753 aa		4.86	□□□□□ -1.63
VAC7	YNL054W	HOT1	Q03213	719 aa		4.86	□□□□□ -1.63
VAC7	YNL054W	SML1	Q04964	104 aa		4.86	□□□□□ -1.63
VAC7	YNL054W	YPL225W	Q08971	146 aa	Known RBP	4.86	□□□□□ -1.63
VAC7	YNL054W	KEX1	P09620	729 aa		4.85	□□□□□ -1.63
VAC7	YNL054W	SPT5	P27692	1063 aa	Known RBP	4.85	□□□□□ -1.63
VAC7	YNL054W	RRP14	P36080	434 aa	Known RBP	4.85	□□□□□ -1.63
VAC7	YNL054W	HXT17	P53631	564 aa		4.85	□□□□□ -1.63
VAC7	YNL054W	MAK11	P20484	414 aa	Known RBP	4.85	□□□□□ -1.63
VAC7	YNL054W	DSF2	P38213	736 aa		4.85	□□□□□ -1.63
VAC7	YNL054W	YNG2	P38806	282 aa	Known RBP	4.85	□□□□□ -1.63
VAC7	YNL054W	SEC26	P41810	973 aa	Known RBP	4.85	□□□□□ -1.63
VAC7	YNL054W	PEX14	P53112	341 aa		4.85	□□□□□ -1.63
VAC7	YNL054W	GYL1	Q04322	720 aa		4.85	□□□□□ -1.63
VAC7	YNL054W	PLP2	Q12017	286 aa		4.85	□□□□□ -1.63
VAC7	YNL054W	YEF3	P16521	1044 aa	Known RBP	4.85	□□□□□ -1.63
VAC7	YNL054W	MRC1	P25588	1096 aa		4.85	□□□□□ -1.63
VAC7	YNL054W	CDC60	P26637	1090 aa	Known RBP	4.85	□□□□□ -1.63
VAC7	YNL054W	MRX12	P47084	519 aa		4.85	□□□□□ -1.63
VAC7	YNL054W	SPO19	Q03029	223 aa		4.85	□□□□□ -1.63
VAC7	YNL054W	THI22	Q06490	572 aa		4.85	□□□□□ -1.63
VAC7	YNL054W	LAM1	P38851	1228 aa		4.84	□□□□□ -1.63
VAC7	YNL054W	RTT109	Q07794	436 aa		4.84	□□□□□ -1.63
VAC7	YNL054W	BDH2	P39713	417 aa		4.84	□□□□□ -1.63
VAC7	YNL054W	YSH1	Q06224	779 aa	Predicted RBP	4.84	□□□□□ -1.63
VAC7	YNL054W	GCR2	Q01722	534 aa		4.84	□□□□□ -1.64
VAC7	YNL054W	HRQ1	Q05549	1077 aa		4.84	□□□□□ -1.64
VAC7	YNL054W	PRD1	P25375	712 aa		4.83	□□□□□ -1.64
VAC7	YNL054W	MIF2	P35201	549 aa		4.83	□□□□□ -1.64
VAC7	YNL054W	CTH1	P47976	325 aa		4.83	□□□□□ -1.64
VAC7	YNL054W	YGL082W	P53155	381 aa		4.83	□□□□□ -1.64
VAC7	YNL054W	PEX19	Q07418	342 aa		4.83	□□□□□ -1.64
VAC7	YNL054W	SDH5	Q08230	162 aa		4.83	□□□□□ -1.64
VAC7	YNL054W	NOP8	Q08287	484 aa	Predicted RBP	4.83	□□□□□ -1.64
VAC7	YNL054W	PDR5	P33302	1511 aa	Known RBP	4.83	□□□□□ -1.64
VAC7	YNL054W	RRT14	P40470	206 aa		4.83	□□□□□ -1.64
VAC7	YNL054W	HOS4	P40480	1083 aa		4.83	□□□□□ -1.64
VAC7	YNL054W	OMS1	Q06668	471 aa		4.83	□□□□□ -1.64
VAC7	YNL054W	REI1	P38344	393 aa	Predicted RBP	4.82	□□□□□ -1.64
VAC7	YNL054W	CAJ1	P39101	391 aa		4.82	□□□□□ -1.64
VAC7	YNL054W	CCT5	P40413	562 aa	Known RBP	4.82	□□□□□ -1.64
VAC7	YNL054W	RTF1	P53064	558 aa		4.82	□□□□□ -1.64
VAC7	YNL054W	SPT8	P38915	602 aa		4.82	□□□□□ -1.64
VAC7	YNL054W	VPS4	P52917	437 aa		4.82	□□□□□ -1.64
VAC7	YNL054W	HUL5	P53119	910 aa		4.82	□□□□□ -1.64
VAC7	YNL054W	VPS30	Q02948	557 aa		4.82	□□□□□ -1.64
VAC7	YNL054W	YOL098C	Q12496	1037 aa		4.82	□□□□□ -1.64
VAC7	YNL054W	ILV3	P39522	585 aa	Known RBP	4.82	□□□□□ -1.64
VAC7	YNL054W	RRP46	P53256	223 aa	Predicted RBP	4.82	□□□□□ -1.64
VAC7	YNL054W	KRE33	P53914	1056 aa	Known RBP	4.82	□□□□□ -1.64
VAC7	YNL054W	SFB2	P53953	876 aa		4.82	□□□□□ -1.64
VAC7	YNL054W	NKP1	Q12493	238 aa		4.82	□□□□□ -1.64
VAC7	YNL054W	SEC39	Q12745	709 aa		4.82	□□□□□ -1.64
VAC7	YNL054W	RPL19A	P0CX82	189 aa	Known RBP	4.81	□□□□□ -1.64
VAC7	YNL054W	RPL19B	P0CX83	189 aa	Predicted RBP	4.81	□□□□□ -1.64
VAC7	YNL054W	SWI3	P32591	825 aa		4.81	□□□□□ -1.64
VAC7	YNL054W	RPG1	P38249	964 aa	Known RBP	4.81	□□□□□ -1.64
VAC7	YNL054W	MET10	P39692	1035 aa		4.81	□□□□□ -1.64
VAC7	YNL054W	TSR3	Q12094	313 aa	Known RBP	4.81	□□□□□ -1.64
VAC7	YNL054W	TOM71	P38825	639 aa	Known RBP	4.81	□□□□□ -1.64
VAC7	YNL054W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
VAC7	YNL054W	TFC8	Q12308	588 aa		4.81	□□□□□ -1.64
VAC7	YNL054W	ROM2	P51862	1356 aa	Known RBP	4.8	□□□□□ -1.64
VAC7	YNL054W	RAD51	P25454	400 aa		4.8	□□□□□ -1.64
VAC7	YNL054W	CDC15	P27636	974 aa		4.8	□□□□□ -1.64
VAC7	YNL054W	RFC5	P38251	354 aa		4.8	□□□□□ -1.64
VAC7	YNL054W	APT1	P49435	187 aa	Known RBP	4.8	□□□□□ -1.64
VAC7	YNL054W	PSK1	P31374	1356 aa		4.8	□□□□□ -1.64
VAC7	YNL054W	NPR3	P38742	1146 aa		4.8	□□□□□ -1.64
VAC7	YNL054W	NDC80	P40460	691 aa		4.8	□□□□□ -1.64
VAC7	YNL054W	FKH1	P40466	484 aa		4.8	□□□□□ -1.64
VAC7	YNL054W	LCB5	Q06147	687 aa	Known RBP	4.8	□□□□□ -1.64
VAC7	YNL054W	SMC6	Q12749	1114 aa		4.8	□□□□□ -1.64
VAC7	YNL054W	TAF13	P11747	167 aa		4.8	□□□□□ -1.64
VAC7	YNL054W	TY4A-H	Q6Q5P6	413 aa		4.8	□□□□□ -1.64
VAC7	YNL054W	SRP54	P20424	541 aa	Known RBP	4.79	□□□□□ -1.64
VAC7	YNL054W	DPH5	P32469	300 aa	Predicted RBP	4.79	□□□□□ -1.64
VAC7	YNL054W	YME2	P32843	850 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	NUF2	P33895	451 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	RGD1	P38339	666 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	RRM3	P38766	723 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	DRS2	P39524	1355 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	MET5	P47169	1442 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	CDC37	P06101	506 aa	Known RBP	4.79	□□□□□ -1.64
VAC7	YNL054W	ATE1	P16639	503 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	HEL1	P36113	551 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	YPR097W	Q06839	1073 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	YOL087C	Q99247	1116 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	GCN2	P15442	1659 aa		4.79	□□□□□ -1.64
VAC7	YNL054W	PRX1	P34227	261 aa	Known RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms