RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A NOP2P40991 618 aaKnown RBP8.31□□□□□ -1.08
KSH1YNL024C-A SIS1P25294 352 aaKnown RBP8.3□□□□□ -1.08
KSH1YNL024C-A PRP45P28004 379 aaPredicted RBP8.3□□□□□ -1.08
KSH1YNL024C-A KAR2P16474 682 aaKnown RBP8.29□□□□□ -1.08
KSH1YNL024C-A RIM15P43565 1770 aa8.28□□□□□ -1.08
KSH1YNL024C-A APC1P53886 1748 aa8.26□□□□□ -1.09
KSH1YNL024C-A TRK1P12685 1235 aa8.26□□□□□ -1.09
KSH1YNL024C-A VNX1P42839 908 aa8.26□□□□□ -1.09
KSH1YNL024C-A YDL144CQ07589 356 aa8.25□□□□□ -1.09
KSH1YNL024C-A VPS29P38759 282 aa8.24□□□□□ -1.09
KSH1YNL024C-A RPO41P13433 1351 aaKnown RBP8.23□□□□□ -1.09
KSH1YNL024C-A PRP5P21372 849 aaPredicted RBP8.23□□□□□ -1.09
KSH1YNL024C-A PIB1Q06651 286 aa8.23□□□□□ -1.09
KSH1YNL024C-A SNF2P22082 1703 aa8.23□□□□□ -1.09
KSH1YNL024C-A AUS1Q08409 1394 aa8.22□□□□□ -1.09
KSH1YNL024C-A CSE4P36012 229 aa8.22□□□□□ -1.09
KSH1YNL024C-A RTR1P40084 226 aaPredicted RBP8.22□□□□□ -1.09
KSH1YNL024C-A UBP1P25037 809 aa8.21□□□□□ -1.1
KSH1YNL024C-A GTT3P39996 337 aa8.21□□□□□ -1.1
KSH1YNL024C-A YFR016CP43597 1233 aaKnown RBP8.21□□□□□ -1.1
KSH1YNL024C-A YMR1P47147 688 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
KSH1YNL024C-A WSC3Q12215 556 aa8.21□□□□□ -1.1
KSH1YNL024C-A RPS24AP0CX31 135 aaKnown RBP8.2□□□□□ -1.1
KSH1YNL024C-A RPS24BP0CX32 135 aaKnown RBP8.2□□□□□ -1.1
KSH1YNL024C-A RCR1P38212 213 aa8.19□□□□□ -1.1
KSH1YNL024C-A MSB3P48566 633 aaPredicted RBP8.19□□□□□ -1.1
KSH1YNL024C-A RRP46P53256 223 aaPredicted RBP8.19□□□□□ -1.1
KSH1YNL024C-A PAP2P53632 584 aaKnown RBP8.19□□□□□ -1.1
KSH1YNL024C-A HIM1Q06674 414 aa8.19□□□□□ -1.1
KSH1YNL024C-A EDE1P34216 1381 aa8.19□□□□□ -1.1
KSH1YNL024C-A PRD1P25375 712 aa8.18□□□□□ -1.1
KSH1YNL024C-A RVB2Q12464 471 aaKnown RBP8.18□□□□□ -1.1
KSH1YNL024C-A SPP1Q03012 353 aa8.17□□□□□ -1.1
KSH1YNL024C-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
KSH1YNL024C-A RSF2P46974 1380 aa8.17□□□□□ -1.1
KSH1YNL024C-A ROM2P51862 1356 aaKnown RBP8.17□□□□□ -1.1
KSH1YNL024C-A DPS1P04802 557 aaKnown RBP8.16□□□□□ -1.1
KSH1YNL024C-A SIR4P11978 1358 aa8.16□□□□□ -1.1
KSH1YNL024C-A STS1P38637 319 aa8.16□□□□□ -1.1
KSH1YNL024C-A RPN11P43588 306 aaKnown RBP8.16□□□□□ -1.1
KSH1YNL024C-A MPP10P47083 593 aaKnown RBP8.16□□□□□ -1.1
KSH1YNL024C-A CTF4Q01454 927 aa8.16□□□□□ -1.1
KSH1YNL024C-A SUI2P20459 304 aaKnown RBP8.15□□□□□ -1.1
KSH1YNL024C-A DBP1P24784 617 aaKnown RBP8.15□□□□□ -1.1
KSH1YNL024C-A IES2P40154 320 aa8.15□□□□□ -1.1
KSH1YNL024C-A DOT5P40553 215 aa8.15□□□□□ -1.1
KSH1YNL024C-A GAS4Q08271 471 aa8.15□□□□□ -1.1
KSH1YNL024C-A YRF1-4O13559 1382 aa8.14□□□□□ -1.11
KSH1YNL024C-A FPR3P38911 411 aaKnown RBP8.14□□□□□ -1.11
KSH1YNL024C-A BUD27P43573 796 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
KSH1YNL024C-A AKL1P38080 1108 aaKnown RBP8.13□□□□□ -1.11
KSH1YNL024C-A YBL086CP38177 466 aa8.13□□□□□ -1.11
KSH1YNL024C-A TIF11P38912 153 aaKnown RBP8.13□□□□□ -1.11
KSH1YNL024C-A TCB1Q12466 1186 aa8.13□□□□□ -1.11
KSH1YNL024C-A SAP155P43612 1002 aa8.12□□□□□ -1.11
KSH1YNL024C-A THI22Q06490 572 aa8.12□□□□□ -1.11
KSH1YNL024C-A SLM3Q12093 417 aa8.12□□□□□ -1.11
KSH1YNL024C-A MAK21Q12176 1025 aaKnown RBP8.12□□□□□ -1.11
KSH1YNL024C-A MAM1P40065 302 aa8.11□□□□□ -1.11
KSH1YNL024C-A DSD1P53095 428 aa8.11□□□□□ -1.11
KSH1YNL024C-A YNL050CP53952 270 aa8.11□□□□□ -1.11
KSH1YNL024C-A HEF3P53978 1044 aaKnown RBP8.11□□□□□ -1.11
KSH1YNL024C-A FOX2Q02207 900 aaKnown RBP8.11□□□□□ -1.11
KSH1YNL024C-A RAD2P07276 1031 aa8.1□□□□□ -1.11
KSH1YNL024C-A TPD3P31383 635 aa8.09□□□□□ -1.11
KSH1YNL024C-A YJL181WP46987 611 aa8.09□□□□□ -1.11
KSH1YNL024C-A VMA1P17255 1071 aaKnown RBP8.08□□□□□ -1.12
KSH1YNL024C-A UGA2P38067 497 aa8.08□□□□□ -1.12
KSH1YNL024C-A NTH2P35172 780 aa8.07□□□□□ -1.12
KSH1YNL024C-A NPR2P39923 615 aa8.07□□□□□ -1.12
KSH1YNL024C-A BUB1P41695 1021 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
KSH1YNL024C-A AOS1Q06624 347 aa8.07□□□□□ -1.12
KSH1YNL024C-A PRP40P33203 583 aaKnown RBP8.06□□□□□ -1.12
KSH1YNL024C-A GYP7P48365 746 aa8.06□□□□□ -1.12
KSH1YNL024C-A LYS4P49367 693 aaPredicted RBP8.06□□□□□ -1.12
KSH1YNL024C-A ZDS1P50111 915 aaKnown RBP8.06□□□□□ -1.12
KSH1YNL024C-A RTT109Q07794 436 aa8.06□□□□□ -1.12
KSH1YNL024C-A LAM6Q08001 693 aa8.06□□□□□ -1.12
KSH1YNL024C-A YOL036WQ08206 761 aa8.06□□□□□ -1.12
KSH1YNL024C-A MSB4Q12317 492 aa8.06□□□□□ -1.12
KSH1YNL024C-A SSA2P10592 639 aaKnown RBP8.05□□□□□ -1.12
KSH1YNL024C-A UGA3P26370 528 aa8.05□□□□□ -1.12
KSH1YNL024C-A ALD2P47771 506 aa8.05□□□□□ -1.12
KSH1YNL024C-A YKL133CP36066 463 aa8.04□□□□□ -1.12
KSH1YNL024C-A YIL092WP40497 633 aa8.04□□□□□ -1.12
KSH1YNL024C-A XKS1P42826 600 aa8.04□□□□□ -1.12
KSH1YNL024C-A SAM3Q08986 587 aa8.04□□□□□ -1.12
KSH1YNL024C-A IOC2Q12072 812 aa8.04□□□□□ -1.12
KSH1YNL024C-A LYS2P07702 1392 aa8.03□□□□□ -1.12
KSH1YNL024C-A HSP104P31539 908 aaKnown RBP8.03□□□□□ -1.12
KSH1YNL024C-A NSE3Q05541 303 aa8.03□□□□□ -1.12
KSH1YNL024C-A COBP00163 385 aa8.02□□□□□ -1.13
KSH1YNL024C-A YKR075CP36155 307 aa8.02□□□□□ -1.13
KSH1YNL024C-A ULI1P43604 169 aa8.02□□□□□ -1.13
KSH1YNL024C-A MEC3Q02574 474 aa8.02□□□□□ -1.13
KSH1YNL024C-A SSA1P10591 642 aaKnown RBP8.01□□□□□ -1.13
KSH1YNL024C-A SET4P42948 560 aa8.01□□□□□ -1.13
KSH1YNL024C-A CTH1P47976 325 aa8.01□□□□□ -1.13
KSH1YNL024C-A KCC4P25389 1037 aa8□□□□□ -1.13
KSH1YNL024C-A AIR2Q12476 344 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 109.1 ms