RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C FIG4P42837 879 aa6.22□□□□□ -1.41
UBX4YMR067C UGA3P26370 528 aa6.2□□□□□ -1.42
UBX4YMR067C YJR115WP47152 169 aa6.19□□□□□ -1.42
UBX4YMR067C HGH1P48362 394 aaKnown RBP6.19□□□□□ -1.42
UBX4YMR067C TFB3Q03290 321 aa6.19□□□□□ -1.42
UBX4YMR067C YBL036CP38197 257 aa6.18□□□□□ -1.42
UBX4YMR067C EMW1P42842 904 aaKnown RBP6.18□□□□□ -1.42
UBX4YMR067C YPR084WQ06821 456 aa6.18□□□□□ -1.42
UBX4YMR067C ENV9Q08651 330 aa6.18□□□□□ -1.42
UBX4YMR067C GUT2P32191 649 aa6.17□□□□□ -1.42
UBX4YMR067C YBL086CP38177 466 aa6.17□□□□□ -1.42
UBX4YMR067C FRA1Q07825 749 aa6.16□□□□□ -1.42
UBX4YMR067C MET22P32179 357 aa6.15□□□□□ -1.42
UBX4YMR067C MRX12P47084 519 aa6.15□□□□□ -1.42
UBX4YMR067C PTK2P47116 818 aaKnown RBP6.15□□□□□ -1.42
UBX4YMR067C SRF1Q12516 437 aa6.15□□□□□ -1.42
UBX4YMR067C YDR444WQ04093 687 aa6.14□□□□□ -1.43
UBX4YMR067C APP1P53933 587 aa6.13□□□□□ -1.43
UBX4YMR067C STE20Q03497 939 aaKnown RBP6.13□□□□□ -1.43
UBX4YMR067C LCB5Q06147 687 aaKnown RBP6.13□□□□□ -1.43
UBX4YMR067C PKC1P24583 1151 aa6.12□□□□□ -1.43
UBX4YMR067C MKS1P34072 584 aa6.12□□□□□ -1.43
UBX4YMR067C YPP1P46951 817 aa6.12□□□□□ -1.43
UBX4YMR067C ARG82P07250 355 aa6.11□□□□□ -1.43
UBX4YMR067C FBP26P32604 452 aa6.11□□□□□ -1.43
UBX4YMR067C NUP85P46673 744 aa6.11□□□□□ -1.43
UBX4YMR067C YLR346CQ06139 101 aa6.11□□□□□ -1.43
UBX4YMR067C MCM16Q12262 181 aa6.11□□□□□ -1.43
UBX4YMR067C BIO2P32451 375 aa6.1□□□□□ -1.43
UBX4YMR067C AAD14P42884 376 aa6.1□□□□□ -1.43
UBX4YMR067C GAR1P28007 205 aaKnown RBP6.09□□□□□ -1.43
UBX4YMR067C ITT1Q04638 464 aa6.09□□□□□ -1.43
UBX4YMR067C RPP2BP02400 110 aaKnown RBP6.08□□□□□ -1.44
UBX4YMR067C GBP2P25555 427 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
UBX4YMR067C APL6P46682 809 aa6.08□□□□□ -1.44
UBX4YMR067C ATG20Q07528 640 aa6.08□□□□□ -1.44
UBX4YMR067C YDJ1P25491 409 aaKnown RBP6.07□□□□□ -1.44
UBX4YMR067C ATG3P40344 310 aa6.07□□□□□ -1.44
UBX4YMR067C SUP45P12385 437 aaKnown RBP6.06□□□□□ -1.44
UBX4YMR067C STE6P12866 1290 aa6.06□□□□□ -1.44
UBX4YMR067C RGA1P39083 1007 aa6.06□□□□□ -1.44
UBX4YMR067C EMP47P43555 445 aa6.06□□□□□ -1.44
UBX4YMR067C LSC2P53312 427 aa6.06□□□□□ -1.44
UBX4YMR067C YPL062WQ02781 134 aa6.06□□□□□ -1.44
UBX4YMR067C DFG5Q05031 458 aa6.06□□□□□ -1.44
UBX4YMR067C OPT2Q06593 877 aa6.06□□□□□ -1.44
UBX4YMR067C BDS1Q08347 646 aa6.06□□□□□ -1.44
UBX4YMR067C GLY1P37303 387 aaKnown RBP6.05□□□□□ -1.44
UBX4YMR067C ISU1Q03020 165 aa6.05□□□□□ -1.44
UBX4YMR067C MIP1P15801 1254 aa6.04□□□□□ -1.44
UBX4YMR067C YJL007CP47080 104 aa6.04□□□□□ -1.44
UBX4YMR067C UTP13Q05946 817 aaKnown RBP6.04□□□□□ -1.44
UBX4YMR067C YNL108CP53929 270 aa6.03□□□□□ -1.44
UBX4YMR067C ISF1P32488 338 aa6.02□□□□□ -1.45
UBX4YMR067C YJR098CP47139 656 aa6.02□□□□□ -1.45
UBX4YMR067C RIM21P48565 533 aa6.02□□□□□ -1.45
UBX4YMR067C SCW11P53189 542 aa6.02□□□□□ -1.45
UBX4YMR067C UBP2Q01476 1272 aa6.02□□□□□ -1.45
UBX4YMR067C ENO2P00925 437 aaKnown RBP6.01□□□□□ -1.45
UBX4YMR067C ACO2P39533 789 aa6.01□□□□□ -1.45
UBX4YMR067C YDL176WQ12027 708 aa6.01□□□□□ -1.45
UBX4YMR067C ISR1Q06098 443 aaKnown RBP6□□□□□ -1.45
UBX4YMR067C TY1A-BLQ12266 440 aa6□□□□□ -1.45
UBX4YMR067C SPT2P06843 333 aaPredicted RBP5.99□□□□□ -1.45
UBX4YMR067C DLD1P32891 587 aa5.99□□□□□ -1.45
UBX4YMR067C DLD3P39976 496 aaKnown RBP5.99□□□□□ -1.45
UBX4YMR067C BIM1P40013 344 aa5.99□□□□□ -1.45
UBX4YMR067C VTC4P47075 721 aa5.99□□□□□ -1.45
UBX4YMR067C RPL34BP40525 121 aaKnown RBP5.98□□□□□ -1.45
UBX4YMR067C TIF1P10081 395 aaKnown RBP5.97□□□□□ -1.45
UBX4YMR067C UTR2P32623 467 aa5.97□□□□□ -1.45
UBX4YMR067C ATG32P40458 529 aa5.97□□□□□ -1.45
UBX4YMR067C TCB1Q12466 1186 aa5.97□□□□□ -1.45
UBX4YMR067C SOH1P38633 127 aa5.96□□□□□ -1.46
UBX4YMR067C CAF120P53836 1060 aa5.96□□□□□ -1.46
UBX4YMR067C TBS1P38114 1094 aa5.95□□□□□ -1.46
UBX4YMR067C HAL5P38970 855 aaKnown RBP5.95□□□□□ -1.46
UBX4YMR067C MRX10Q05648 414 aa5.95□□□□□ -1.46
UBX4YMR067C RTG2P32608 588 aaKnown RBP5.94□□□□□ -1.46
UBX4YMR067C SIS2P36024 562 aa5.94□□□□□ -1.46
UBX4YMR067C WTM2Q12206 467 aa5.94□□□□□ -1.46
UBX4YMR067C RDS2P19541 446 aaKnown RBP5.93□□□□□ -1.46
UBX4YMR067C MSN5P52918 1224 aa5.93□□□□□ -1.46
UBX4YMR067C ENO1P00924 437 aaKnown RBP5.92□□□□□ -1.46
UBX4YMR067C DAT1P13483 248 aaKnown RBP5.92□□□□□ -1.46
UBX4YMR067C DAL1P32375 460 aa5.92□□□□□ -1.46
UBX4YMR067C OSH7P38755 437 aa5.92□□□□□ -1.46
UBX4YMR067C YIR007WP40566 764 aa5.92□□□□□ -1.46
UBX4YMR067C DMA2P53924 522 aa5.92□□□□□ -1.46
UBX4YMR067C HDA3Q06623 655 aa5.92□□□□□ -1.46
UBX4YMR067C SLX8P40072 274 aa5.91□□□□□ -1.46
UBX4YMR067C YFL034WP43564 1073 aa5.9□□□□□ -1.46
UBX4YMR067C ROG3P43602 733 aa5.9□□□□□ -1.46
UBX4YMR067C RGA2Q06407 1009 aa5.9□□□□□ -1.46
UBX4YMR067C CDC19P00549 500 aaKnown RBP5.89□□□□□ -1.47
UBX4YMR067C PEP12P32854 288 aa5.89□□□□□ -1.47
UBX4YMR067C TY1A-MR1Q04215 440 aa5.89□□□□□ -1.47
UBX4YMR067C AIM9P40053 627 aaKnown RBP5.88□□□□□ -1.47
UBX4YMR067C SUM1P46676 1062 aa5.88□□□□□ -1.47
UBX4YMR067C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms