RNA–Protein interactions for RNA: YLR424W

SPP382, Transcript of Essential protein that forms a dimer with Ntr2p, yeast

Gene SPP382, Length 2,127 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPP382	YLR424W	UGA3	P26370	528 aa		4.73	□□□□□ -1.65
SPP382	YLR424W	ALR1	Q08269	859 aa		4.73	□□□□□ -1.65
SPP382	YLR424W	YDL206W	Q12424	762 aa		4.73	□□□□□ -1.65
SPP382	YLR424W	SSA2	P10592	639 aa	Known RBP	4.73	□□□□□ -1.65
SPP382	YLR424W	YLR346C	Q06139	101 aa		4.73	□□□□□ -1.65
SPP382	YLR424W	YPR097W	Q06839	1073 aa		4.73	□□□□□ -1.65
SPP382	YLR424W	YJU3	P28321	313 aa		4.72	□□□□□ -1.65
SPP382	YLR424W	PKH3	Q03306	898 aa	Predicted RBP	4.72	□□□□□ -1.65
SPP382	YLR424W	TY1A-BL	Q12266	440 aa		4.72	□□□□□ -1.65
SPP382	YLR424W	MRT4	P33201	236 aa	Known RBP	4.72	□□□□□ -1.65
SPP382	YLR424W	NUP85	P46673	744 aa		4.71	□□□□□ -1.66
SPP382	YLR424W	RSC30	P38781	883 aa		4.7	□□□□□ -1.66
SPP382	YLR424W	ARG8	P18544	423 aa		4.7	□□□□□ -1.66
SPP382	YLR424W	SCW11	P53189	542 aa		4.7	□□□□□ -1.66
SPP382	YLR424W	SRF1	Q12516	437 aa		4.7	□□□□□ -1.66
SPP382	YLR424W	GUA1	P38625	525 aa	Known RBP	4.68	□□□□□ -1.66
SPP382	YLR424W	MIP1	P15801	1254 aa		4.67	□□□□□ -1.66
SPP382	YLR424W	RAD59	Q12223	238 aa		4.67	□□□□□ -1.66
SPP382	YLR424W	RTT106	P40161	455 aa		4.66	□□□□□ -1.66
SPP382	YLR424W	KIP2	P28743	706 aa		4.66	□□□□□ -1.66
SPP382	YLR424W	HPC2	Q01448	625 aa		4.66	□□□□□ -1.66
SPP382	YLR424W	YPR204W	Q08995	1032 aa		4.65	□□□□□ -1.67
SPP382	YLR424W	ICP55	P40051	511 aa		4.64	□□□□□ -1.67
SPP382	YLR424W	IXR1	P33417	597 aa		4.64	□□□□□ -1.67
SPP382	YLR424W	VAC17	P25591	423 aa		4.63	□□□□□ -1.67
SPP382	YLR424W	BRL1	P38770	471 aa		4.63	□□□□□ -1.67
SPP382	YLR424W	LSB3	P43603	459 aa	Known RBP	4.63	□□□□□ -1.67
SPP382	YLR424W	DMA2	P53924	522 aa		4.63	□□□□□ -1.67
SPP382	YLR424W	RLF2	Q12495	606 aa		4.63	□□□□□ -1.67
SPP382	YLR424W	AIM44	Q99299	758 aa		4.63	□□□□□ -1.67
SPP382	YLR424W	AAD14	P42884	376 aa		4.62	□□□□□ -1.67
SPP382	YLR424W	PUS1	Q12211	544 aa	Known RBP	4.61	□□□□□ -1.67
SPP382	YLR424W	MAK16	P10962	306 aa	Predicted RBP	4.61	□□□□□ -1.67
SPP382	YLR424W	DPH6	Q12429	685 aa		4.61	□□□□□ -1.67
SPP382	YLR424W	CCP1	P00431	361 aa		4.6	□□□□□ -1.67
SPP382	YLR424W	CSE4	P36012	229 aa		4.6	□□□□□ -1.67
SPP382	YLR424W	ROG3	P43602	733 aa		4.6	□□□□□ -1.67
SPP382	YLR424W	LSC2	P53312	427 aa		4.6	□□□□□ -1.67
SPP382	YLR424W	YJR098C	P47139	656 aa		4.6	□□□□□ -1.67
SPP382	YLR424W	FIG4	P42837	879 aa		4.59	□□□□□ -1.67
SPP382	YLR424W	UBP2	Q01476	1272 aa		4.59	□□□□□ -1.67
SPP382	YLR424W	TFB3	Q03290	321 aa		4.59	□□□□□ -1.67
SPP382	YLR424W	TY1A-MR1	Q04215	440 aa		4.59	□□□□□ -1.67
SPP382	YLR424W	ARG82	P07250	355 aa		4.58	□□□□□ -1.68
SPP382	YLR424W	TEC1	P18412	486 aa		4.58	□□□□□ -1.68
SPP382	YLR424W	YBL086C	P38177	466 aa		4.58	□□□□□ -1.68
SPP382	YLR424W	NAF1	P53919	492 aa	Known RBP	4.58	□□□□□ -1.68
SPP382	YLR424W	PHM7	Q12252	991 aa		4.58	□□□□□ -1.68
SPP382	YLR424W	YBL036C	P38197	257 aa		4.57	□□□□□ -1.68
SPP382	YLR424W	HGH1	P48362	394 aa	Known RBP	4.57	□□□□□ -1.68
SPP382	YLR424W	TCB1	Q12466	1186 aa		4.57	□□□□□ -1.68
SPP382	YLR424W	SPT5	P27692	1063 aa	Known RBP	4.56	□□□□□ -1.68
SPP382	YLR424W	DLD1	P32891	587 aa		4.56	□□□□□ -1.68
SPP382	YLR424W	JJJ3	P47138	172 aa		4.56	□□□□□ -1.68
SPP382	YLR424W	GUT2	P32191	649 aa		4.55	□□□□□ -1.68
SPP382	YLR424W	MDJ1	P35191	511 aa		4.55	□□□□□ -1.68
SPP382	YLR424W	OSH7	P38755	437 aa		4.55	□□□□□ -1.68
SPP382	YLR424W	EMW1	P42842	904 aa	Known RBP	4.55	□□□□□ -1.68
SPP382	YLR424W	PKC1	P24583	1151 aa		4.55	□□□□□ -1.68
SPP382	YLR424W	YPR084W	Q06821	456 aa		4.55	□□□□□ -1.68
SPP382	YLR424W	LYS5	P50113	272 aa		4.54	□□□□□ -1.68
SPP382	YLR424W	APP1	P53933	587 aa		4.54	□□□□□ -1.68
SPP382	YLR424W	ITT1	Q04638	464 aa		4.54	□□□□□ -1.68
SPP382	YLR424W	NAP1	P25293	417 aa	Known RBP	4.53	□□□□□ -1.68
SPP382	YLR424W	STE20	Q03497	939 aa	Known RBP	4.53	□□□□□ -1.68
SPP382	YLR424W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.52	□□□□□ -1.69	not detected
SPP382	YLR424W	FRA1	Q07825	749 aa		4.52	□□□□□ -1.69
SPP382	YLR424W	MRX12	P47084	519 aa		4.51	□□□□□ -1.69
SPP382	YLR424W	YDJ1	P25491	409 aa	Known RBP	4.51	□□□□□ -1.69
SPP382	YLR424W	MKS1	P34072	584 aa		4.51	□□□□□ -1.69
SPP382	YLR424W	YFL066C	P43538	392 aa		4.51	□□□□□ -1.69
SPP382	YLR424W	BIO2	P32451	375 aa		4.5	□□□□□ -1.69
SPP382	YLR424W	MCM16	Q12262	181 aa		4.5	□□□□□ -1.69
SPP382	YLR424W	YPP1	P46951	817 aa		4.49	□□□□□ -1.69
SPP382	YLR424W	CCT8	P47079	568 aa	Known RBP	4.49	□□□□□ -1.69
SPP382	YLR424W	NSG2	P53898	299 aa		4.49	□□□□□ -1.69
SPP382	YLR424W	NAM8	Q00539	523 aa	Known RBP	4.49	□□□□□ -1.69
SPP382	YLR424W	FBP26	P32604	452 aa		4.49	□□□□□ -1.69
SPP382	YLR424W	EMP47	P43555	445 aa		4.49	□□□□□ -1.69
SPP382	YLR424W	YJL007C	P47080	104 aa		4.49	□□□□□ -1.69
SPP382	YLR424W	ATG20	Q07528	640 aa		4.49	□□□□□ -1.69
SPP382	YLR424W	CDC19	P00549	500 aa	Known RBP	4.48	□□□□□ -1.69
SPP382	YLR424W	SUP45	P12385	437 aa	Known RBP	4.48	□□□□□ -1.69
SPP382	YLR424W	YNL108C	P53929	270 aa		4.48	□□□□□ -1.69
SPP382	YLR424W	DFG5	Q05031	458 aa		4.48	□□□□□ -1.69
SPP382	YLR424W	BDS1	Q08347	646 aa		4.48	□□□□□ -1.69
SPP382	YLR424W	ISF1	P32488	338 aa		4.47	□□□□□ -1.69
SPP382	YLR424W	STE6	P12866	1290 aa		4.46	□□□□□ -1.69
SPP382	YLR424W	ISU1	Q03020	165 aa		4.46	□□□□□ -1.69
SPP382	YLR424W	RPP2B	P02400	110 aa	Known RBP	4.46	□□□□□ -1.7
SPP382	YLR424W	ATG3	P40344	310 aa		4.46	□□□□□ -1.7
SPP382	YLR424W	APL6	P46682	809 aa		4.46	□□□□□ -1.7
SPP382	YLR424W	ENO2	P00925	437 aa	Known RBP	4.45	□□□□□ -1.7
SPP382	YLR424W	BIM1	P40013	344 aa		4.45	□□□□□ -1.7
SPP382	YLR424W	UTP13	Q05946	817 aa	Known RBP	4.45	□□□□□ -1.7
SPP382	YLR424W	AI1	P03875	834 aa		4.43	□□□□□ -1.7
SPP382	YLR424W	RPL34B	P40525	121 aa	Known RBP	4.43	□□□□□ -1.7
SPP382	YLR424W	RIM21	P48565	533 aa		4.43	□□□□□ -1.7
SPP382	YLR424W	ISR1	Q06098	443 aa	Known RBP	4.43	□□□□□ -1.7
SPP382	YLR424W	ATG32	P40458	529 aa		4.43	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms