RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C XDJ1P39102 459 aa5.69□□□□□ -1.5
VPS33YLR396C FRA1Q07825 749 aa5.68□□□□□ -1.5
VPS33YLR396C ISF1P32488 338 aa5.68□□□□□ -1.5
VPS33YLR396C EMP47P43555 445 aa5.68□□□□□ -1.5
VPS33YLR396C RDS2P19541 446 aaKnown RBP5.67□□□□□ -1.5
VPS33YLR396C SUB2Q07478 446 aaKnown RBP5.67□□□□□ -1.5
VPS33YLR396C SSA4P22202 642 aaKnown RBP5.67□□□□□ -1.5
VPS33YLR396C CPS1P27614 576 aa5.67□□□□□ -1.5
VPS33YLR396C GUT2P32191 649 aa5.67□□□□□ -1.5
VPS33YLR396C CST6P40535 587 aa5.67□□□□□ -1.5
VPS33YLR396C BDP1P46678 594 aa5.67□□□□□ -1.5
VPS33YLR396C STE20Q03497 939 aaKnown RBP5.67□□□□□ -1.5
VPS33YLR396C SIS2P36024 562 aa5.66□□□□□ -1.5
VPS33YLR396C PEP12P32854 288 aa5.65□□□□□ -1.51
VPS33YLR396C MRX12P47084 519 aa5.65□□□□□ -1.51
VPS33YLR396C APL6P46682 809 aa5.64□□□□□ -1.51
VPS33YLR396C YEL077CQ3E7X8 1277 aa5.64□□□□□ -1.51
VPS33YLR396C FRK1Q03002 865 aaPredicted RBP5.63□□□□□ -1.51
VPS33YLR396C PUS5Q06244 254 aa5.63□□□□□ -1.51
VPS33YLR396C ITT1Q04638 464 aa5.62□□□□□ -1.51
VPS33YLR396C AMS1P22855 1083 aa5.61□□□□□ -1.51
VPS33YLR396C KIP2P28743 706 aa5.61□□□□□ -1.51
VPS33YLR396C NOB1Q08444 459 aaKnown RBP5.61□□□□□ -1.51
VPS33YLR396C ENV9Q08651 330 aa5.61□□□□□ -1.51
VPS33YLR396C SSA1P10591 642 aaKnown RBP5.6□□□□□ -1.51
VPS33YLR396C PUP1P25043 261 aa5.6□□□□□ -1.51
VPS33YLR396C IXR1P33417 597 aa5.6□□□□□ -1.51
VPS33YLR396C SYH1Q02875 849 aaKnown RBP5.6□□□□□ -1.51
VPS33YLR396C TGL4P36165 910 aa5.6□□□□□ -1.51
VPS33YLR396C ATG3P40344 310 aa5.6□□□□□ -1.51
VPS33YLR396C UTP13Q05946 817 aaKnown RBP5.6□□□□□ -1.51
VPS33YLR396C SOH1P38633 127 aa5.58□□□□□ -1.52
VPS33YLR396C EMW1P42842 904 aaKnown RBP5.57□□□□□ -1.52
VPS33YLR396C KTR7P40504 517 aa5.57□□□□□ -1.52
VPS33YLR396C HED1Q03937 162 aa5.57□□□□□ -1.52
VPS33YLR396C YML083CQ04526 418 aa5.57□□□□□ -1.52
VPS33YLR396C RAS1P01119 309 aa5.56□□□□□ -1.52
VPS33YLR396C GEF1P37020 779 aa5.56□□□□□ -1.52
VPS33YLR396C HAL5P38970 855 aaKnown RBP5.56□□□□□ -1.52
VPS33YLR396C ATG20Q07528 640 aa5.56□□□□□ -1.52
VPS33YLR396C MRT4P33201 236 aaKnown RBP5.55□□□□□ -1.52
VPS33YLR396C APP1P53933 587 aa5.55□□□□□ -1.52
VPS33YLR396C ISR1Q06098 443 aaKnown RBP5.55□□□□□ -1.52
VPS33YLR396C GAL2P13181 574 aa5.54□□□□□ -1.52
VPS33YLR396C CLA4P48562 842 aa5.54□□□□□ -1.52
VPS33YLR396C ECM23Q02710 187 aa5.54□□□□□ -1.52
VPS33YLR396C PHO87P25360 923 aa5.52□□□□□ -1.53
VPS33YLR396C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
VPS33YLR396C DPS1P04802 557 aaKnown RBP5.51□□□□□ -1.53
VPS33YLR396C FBP26P32604 452 aa5.51□□□□□ -1.53
VPS33YLR396C YBL086CP38177 466 aa5.51□□□□□ -1.53
VPS33YLR396C ACS2P52910 683 aaKnown RBP5.51□□□□□ -1.53
VPS33YLR396C MET32Q12041 191 aa5.51□□□□□ -1.53
VPS33YLR396C TSC13Q99190 310 aa5.51□□□□□ -1.53
VPS33YLR396C MKS1P34072 584 aa5.51□□□□□ -1.53
VPS33YLR396C RPL34AP87262 121 aaPredicted RBP5.51□□□□□ -1.53
VPS33YLR396C ISU1Q03020 165 aa5.51□□□□□ -1.53
VPS33YLR396C HDA3Q06623 655 aa5.51□□□□□ -1.53
VPS33YLR396C HAP4P14064 554 aa5.5□□□□□ -1.53
VPS33YLR396C MIP1P15801 1254 aa5.5□□□□□ -1.53
VPS33YLR396C AIR1P40507 360 aaKnown RBP5.5□□□□□ -1.53
VPS33YLR396C UBX7P38349 436 aa5.49□□□□□ -1.53
VPS33YLR396C PDI1P17967 522 aaKnown RBP5.49□□□□□ -1.53
VPS33YLR396C AIM9P40053 627 aaKnown RBP5.49□□□□□ -1.53
VPS33YLR396C ROM1P53046 1155 aa5.49□□□□□ -1.53
VPS33YLR396C SPT2P06843 333 aaPredicted RBP5.48□□□□□ -1.53
VPS33YLR396C CDC4P07834 779 aa5.48□□□□□ -1.53
VPS33YLR396C STE6P12866 1290 aa5.47□□□□□ -1.53
VPS33YLR396C YFL034WP43564 1073 aa5.47□□□□□ -1.53
VPS33YLR396C GAS4Q08271 471 aa5.47□□□□□ -1.53
VPS33YLR396C UTR2P32623 467 aa5.46□□□□□ -1.53
VPS33YLR396C RTT106P40161 455 aa5.46□□□□□ -1.53
VPS33YLR396C DFG5Q05031 458 aa5.46□□□□□ -1.53
VPS33YLR396C AFT1P22149 690 aa5.45□□□□□ -1.54
VPS33YLR396C CDC3P32457 520 aaKnown RBP5.45□□□□□ -1.54
VPS33YLR396C SLX8P40072 274 aa5.45□□□□□ -1.54
VPS33YLR396C NTH2P35172 780 aa5.44□□□□□ -1.54
VPS33YLR396C MSB3P48566 633 aaPredicted RBP5.44□□□□□ -1.54
VPS33YLR396C BDS1Q08347 646 aa5.44□□□□□ -1.54
VPS33YLR396C SWI5P08153 709 aa5.44□□□□□ -1.54
VPS33YLR396C ASH1P34233 588 aa5.44□□□□□ -1.54
VPS33YLR396C CWC15Q03772 175 aaKnown RBP5.44□□□□□ -1.54
VPS33YLR396C PUF6Q04373 656 aaKnown RBP5.44□□□□□ -1.54
VPS33YLR396C RPS6AP0CX37 236 aaKnown RBP5.43□□□□□ -1.54
VPS33YLR396C RPS6BP0CX38 236 aaPredicted RBP5.43□□□□□ -1.54
VPS33YLR396C WTM2Q12206 467 aa5.43□□□□□ -1.54
VPS33YLR396C UBP1P25037 809 aa5.43□□□□□ -1.54
VPS33YLR396C TPS3P38426 1054 aaKnown RBP5.43□□□□□ -1.54
VPS33YLR396C HST3P53687 447 aa5.43□□□□□ -1.54
VPS33YLR396C RPP2BP02400 110 aaKnown RBP5.42□□□□□ -1.54
VPS33YLR396C DAT1P13483 248 aaKnown RBP5.42□□□□□ -1.54
VPS33YLR396C UGA3P26370 528 aa5.42□□□□□ -1.54
VPS33YLR396C TBS1P38114 1094 aa5.42□□□□□ -1.54
VPS33YLR396C CYT1P07143 309 aa5.41□□□□□ -1.54
VPS33YLR396C VAN1P23642 535 aa5.41□□□□□ -1.54
VPS33YLR396C YML020WQ03722 664 aa5.4□□□□□ -1.54
VPS33YLR396C TRS33Q99394 268 aa5.4□□□□□ -1.54
VPS33YLR396C SUV3P32580 737 aa5.39□□□□□ -1.55
VPS33YLR396C NGR1P32831 672 aaKnown RBP5.39□□□□□ -1.55
VPS33YLR396C AAD14P42884 376 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms