RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W YNL115CP53925 644 aa5.88□□□□□ -1.47
SOF1YLL011W FRT1Q99332 602 aa5.88□□□□□ -1.47
SOF1YLL011W PHO87P25360 923 aa5.87□□□□□ -1.47
SOF1YLL011W QDR1P40475 563 aa5.87□□□□□ -1.47
SOF1YLL011W SRP40P32583 406 aaPredicted RBP5.86□□□□□ -1.47
SOF1YLL011W ALD3P54114 506 aa5.86□□□□□ -1.47
SOF1YLL011W PUN1Q06991 263 aa5.86□□□□□ -1.47
SOF1YLL011W HTA1P04911 132 aaKnown RBP5.85□□□□□ -1.47
SOF1YLL011W HTA2P04912 132 aa5.85□□□□□ -1.47
SOF1YLL011W FUR4P05316 633 aaKnown RBP5.85□□□□□ -1.47
SOF1YLL011W MET4P32389 672 aa5.85□□□□□ -1.47
SOF1YLL011W RRP14P36080 434 aaKnown RBP5.85□□□□□ -1.47
SOF1YLL011W FYV10P40492 516 aa5.85□□□□□ -1.47
SOF1YLL011W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
SOF1YLL011W ACS2P52910 683 aaKnown RBP5.85□□□□□ -1.47
SOF1YLL011W ROM1P53046 1155 aa5.85□□□□□ -1.47
SOF1YLL011W RTF1P53064 558 aa5.85□□□□□ -1.47
SOF1YLL011W ALD6P54115 500 aaKnown RBP5.85□□□□□ -1.47
SOF1YLL011W MNL2Q12205 849 aa5.85□□□□□ -1.47
SOF1YLL011W HAP4P14064 554 aa5.84□□□□□ -1.47
SOF1YLL011W YKL091CP33324 310 aaKnown RBP5.84□□□□□ -1.47
SOF1YLL011W DAN4P47179 1161 aa5.84□□□□□ -1.47
SOF1YLL011W PUS6P53294 404 aa5.84□□□□□ -1.47
SOF1YLL011W SRS2P12954 1174 aa5.83□□□□□ -1.48
SOF1YLL011W TSR4P25040 408 aa5.83□□□□□ -1.48
SOF1YLL011W IOC3P43596 787 aa5.83□□□□□ -1.48
SOF1YLL011W ACF4P47129 309 aa5.83□□□□□ -1.48
SOF1YLL011W YOL036WQ08206 761 aa5.83□□□□□ -1.48
SOF1YLL011W CIT2P08679 460 aa5.83□□□□□ -1.48
SOF1YLL011W SWE1P32944 819 aa5.83□□□□□ -1.48
SOF1YLL011W SET4P42948 560 aa5.83□□□□□ -1.48
SOF1YLL011W TBF1Q02457 562 aa5.83□□□□□ -1.48
SOF1YLL011W URN1Q06525 465 aaKnown RBP5.83□□□□□ -1.48
SOF1YLL011W UBX5Q06682 500 aa5.83□□□□□ -1.48
SOF1YLL011W YRR1Q12172 810 aa5.83□□□□□ -1.48
SOF1YLL011W KEX2P13134 814 aa5.82□□□□□ -1.48
SOF1YLL011W FPR3P38911 411 aaKnown RBP5.82□□□□□ -1.48
SOF1YLL011W GTT3P39996 337 aa5.82□□□□□ -1.48
SOF1YLL011W ALG12P53730 551 aa5.82□□□□□ -1.48
SOF1YLL011W MCM2P29469 868 aa5.81□□□□□ -1.48
SOF1YLL011W TOM20P35180 183 aa5.81□□□□□ -1.48
SOF1YLL011W SOH1P38633 127 aa5.81□□□□□ -1.48
SOF1YLL011W MAD1P40957 749 aa5.81□□□□□ -1.48
SOF1YLL011W SPR28Q04921 423 aa5.81□□□□□ -1.48
SOF1YLL011W ATG3P40344 310 aa5.8□□□□□ -1.48
SOF1YLL011W OSW7P43611 510 aa5.8□□□□□ -1.48
SOF1YLL011W SUB1P54000 292 aaKnown RBP5.8□□□□□ -1.48
SOF1YLL011W STE20Q03497 939 aaKnown RBP5.8□□□□□ -1.48
SOF1YLL011W ERF2Q06551 359 aa5.8□□□□□ -1.48
SOF1YLL011W VPS16Q03308 798 aa5.79□□□□□ -1.48
SOF1YLL011W GAS4Q08271 471 aa5.79□□□□□ -1.48
SOF1YLL011W YDL206WQ12424 762 aa5.79□□□□□ -1.48
SOF1YLL011W MIP1P15801 1254 aa5.78□□□□□ -1.48
SOF1YLL011W PDI1P17967 522 aaKnown RBP5.78□□□□□ -1.48
SOF1YLL011W TEC1P18412 486 aa5.78□□□□□ -1.48
SOF1YLL011W YEL023CP39992 682 aa5.78□□□□□ -1.48
SOF1YLL011W FRA1Q07825 749 aa5.78□□□□□ -1.48
SOF1YLL011W RPT1P33299 467 aaKnown RBP5.77□□□□□ -1.49
SOF1YLL011W TFG1P41895 735 aaPredicted RBP5.77□□□□□ -1.49
SOF1YLL011W NSE3Q05541 303 aa5.77□□□□□ -1.49
SOF1YLL011W PIN2Q12057 282 aa5.77□□□□□ -1.49
SOF1YLL011W WRS1Q12109 432 aaKnown RBP5.77□□□□□ -1.49
SOF1YLL011W SSF2Q12153 453 aaPredicted RBP5.77□□□□□ -1.49
SOF1YLL011W TSC13Q99190 310 aa5.77□□□□□ -1.49
SOF1YLL011W SGS1P35187 1447 aa5.77□□□□□ -1.49
SOF1YLL011W VAN1P23642 535 aa5.77□□□□□ -1.49
SOF1YLL011W GUT2P32191 649 aa5.77□□□□□ -1.49
SOF1YLL011W TUB4P53378 473 aa5.77□□□□□ -1.49
SOF1YLL011W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
SOF1YLL011W PEP7P32609 515 aa5.76□□□□□ -1.49
SOF1YLL011W FIG4P42837 879 aa5.76□□□□□ -1.49
SOF1YLL011W YJL171CP46992 396 aa5.76□□□□□ -1.49
SOF1YLL011W UTP13Q05946 817 aaKnown RBP5.76□□□□□ -1.49
SOF1YLL011W YPR084WQ06821 456 aa5.76□□□□□ -1.49
SOF1YLL011W GPI13Q07830 1017 aa5.76□□□□□ -1.49
SOF1YLL011W TRS33Q99394 268 aa5.76□□□□□ -1.49
SOF1YLL011W CLN2P20438 545 aa5.75□□□□□ -1.49
SOF1YLL011W PBP2P38151 413 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
SOF1YLL011W VNX1P42839 908 aa5.75□□□□□ -1.49
SOF1YLL011W APL6P46682 809 aa5.75□□□□□ -1.49
SOF1YLL011W YRB30P53107 440 aaPredicted RBP5.75□□□□□ -1.49
SOF1YLL011W VPS72Q03388 795 aa5.75□□□□□ -1.49
SOF1YLL011W RPN4Q03465 531 aa5.75□□□□□ -1.49
SOF1YLL011W POB3Q04636 552 aaKnown RBP5.75□□□□□ -1.49
SOF1YLL011W CDC53Q12018 815 aaKnown RBP5.75□□□□□ -1.49
SOF1YLL011W LSO1Q3E827 93 aa5.75□□□□□ -1.49
SOF1YLL011W PHO4P07270 312 aaKnown RBP5.74□□□□□ -1.49
SOF1YLL011W NUD1P32336 851 aa5.74□□□□□ -1.49
SOF1YLL011W BOI1P38041 980 aaKnown RBP5.74□□□□□ -1.49
SOF1YLL011W YJL049WP47048 450 aa5.74□□□□□ -1.49
SOF1YLL011W TRS120Q04183 1289 aa5.74□□□□□ -1.49
SOF1YLL011W DPL1Q05567 589 aa5.74□□□□□ -1.49
SOF1YLL011W SSB1P11484 613 aaKnown RBP5.73□□□□□ -1.49
SOF1YLL011W STI1P15705 589 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
SOF1YLL011W SSB2P40150 613 aaKnown RBP5.73□□□□□ -1.49
SOF1YLL011W SPT2P06843 333 aaPredicted RBP5.72□□□□□ -1.49
SOF1YLL011W SUV3P32580 737 aa5.72□□□□□ -1.49
SOF1YLL011W RPS26AP39938 119 aaKnown RBP5.72□□□□□ -1.49
SOF1YLL011W RPS26BP39939 119 aaKnown RBP5.72□□□□□ -1.49
SOF1YLL011W BUD6P41697 788 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms