RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C HST3P53687 447 aa6.66□□□□□ -1.34
YPT52YKR014C FIG4P42837 879 aa6.65□□□□□ -1.34
YPT52YKR014C GCR2Q01722 534 aa6.65□□□□□ -1.34
YPT52YKR014C GUT2P32191 649 aa6.64□□□□□ -1.35
YPT52YKR014C RPL34BP40525 121 aaKnown RBP6.63□□□□□ -1.35
YPT52YKR014C GAR1P28007 205 aaKnown RBP6.62□□□□□ -1.35
YPT52YKR014C YPP1P46951 817 aa6.62□□□□□ -1.35
YPT52YKR014C YPL062WQ02781 134 aa6.62□□□□□ -1.35
YPT52YKR014C STE20Q03497 939 aaKnown RBP6.62□□□□□ -1.35
YPT52YKR014C ASH1P34233 588 aa6.61□□□□□ -1.35
YPT52YKR014C RTT106P40161 455 aa6.61□□□□□ -1.35
YPT52YKR014C YNL108CP53929 270 aa6.61□□□□□ -1.35
YPT52YKR014C MET32Q12041 191 aa6.61□□□□□ -1.35
YPT52YKR014C AFT1P22149 690 aa6.6□□□□□ -1.35
YPT52YKR014C YDJ1P25491 409 aaKnown RBP6.6□□□□□ -1.35
YPT52YKR014C BIM1P40013 344 aa6.6□□□□□ -1.35
YPT52YKR014C MRX12P47084 519 aa6.6□□□□□ -1.35
YPT52YKR014C UGA3P26370 528 aa6.59□□□□□ -1.35
YPT52YKR014C BIO2P32451 375 aa6.59□□□□□ -1.35
YPT52YKR014C MRT4P33201 236 aaKnown RBP6.59□□□□□ -1.35
YPT52YKR014C SUP45P12385 437 aaKnown RBP6.58□□□□□ -1.36
YPT52YKR014C APP1P53933 587 aa6.58□□□□□ -1.36
YPT52YKR014C MCM16Q12262 181 aa6.58□□□□□ -1.36
YPT52YKR014C GBP2P25555 427 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36 RIP-Chip
YPT52YKR014C ATG32P40458 529 aa6.57□□□□□ -1.36
YPT52YKR014C EMP47P43555 445 aa6.57□□□□□ -1.36
YPT52YKR014C FRA1Q07825 749 aa6.57□□□□□ -1.36
YPT52YKR014C ATG3P40344 310 aa6.56□□□□□ -1.36
YPT52YKR014C EMW1P42842 904 aaKnown RBP6.56□□□□□ -1.36
YPT52YKR014C MSB3P48566 633 aaPredicted RBP6.56□□□□□ -1.36
YPT52YKR014C YPR084WQ06821 456 aa6.56□□□□□ -1.36
YPT52YKR014C TIF1P10081 395 aaKnown RBP6.55□□□□□ -1.36
YPT52YKR014C RTG2P32608 588 aaKnown RBP6.55□□□□□ -1.36
YPT52YKR014C SRF1Q12516 437 aa6.55□□□□□ -1.36
YPT52YKR014C ENO2P00925 437 aaKnown RBP6.54□□□□□ -1.36
YPT52YKR014C ISF1P32488 338 aa6.54□□□□□ -1.36
YPT52YKR014C ITT1Q04638 464 aa6.54□□□□□ -1.36
YPT52YKR014C MKS1P34072 584 aa6.53□□□□□ -1.36
YPT52YKR014C ENV9Q08651 330 aa6.53□□□□□ -1.36
YPT52YKR014C MET22P32179 357 aa6.52□□□□□ -1.37
YPT52YKR014C YBL086CP38177 466 aa6.52□□□□□ -1.37
YPT52YKR014C ATG20Q07528 640 aa6.52□□□□□ -1.37
YPT52YKR014C RPP2BP02400 110 aaKnown RBP6.51□□□□□ -1.37
YPT52YKR014C YJR115WP47152 169 aa6.51□□□□□ -1.37
YPT52YKR014C ARG82P07250 355 aa6.49□□□□□ -1.37
YPT52YKR014C FBP26P32604 452 aa6.49□□□□□ -1.37
YPT52YKR014C RIM21P48565 533 aa6.49□□□□□ -1.37
YPT52YKR014C BDS1Q08347 646 aa6.49□□□□□ -1.37
YPT52YKR014C PTK2P47116 818 aaKnown RBP6.48□□□□□ -1.37
YPT52YKR014C UTP13Q05946 817 aaKnown RBP6.48□□□□□ -1.37
YPT52YKR014C YPR204WQ08995 1032 aa6.48□□□□□ -1.37
YPT52YKR014C ISU1Q03020 165 aa6.47□□□□□ -1.37
YPT52YKR014C DFG5Q05031 458 aa6.47□□□□□ -1.37
YPT52YKR014C ISR1Q06098 443 aaKnown RBP6.47□□□□□ -1.37
YPT52YKR014C ENO1P00924 437 aaKnown RBP6.46□□□□□ -1.38
YPT52YKR014C SOH1P38633 127 aa6.46□□□□□ -1.38
YPT52YKR014C YLR346CQ06139 101 aa6.46□□□□□ -1.38
YPT52YKR014C SIS2P36024 562 aa6.45□□□□□ -1.38
YPT52YKR014C APL6P46682 809 aa6.45□□□□□ -1.38
YPT52YKR014C STE6P12866 1290 aa6.44□□□□□ -1.38
YPT52YKR014C DLD3P39976 496 aaKnown RBP6.44□□□□□ -1.38
YPT52YKR014C NUP85P46673 744 aa6.44□□□□□ -1.38
YPT52YKR014C YDR444WQ04093 687 aa6.44□□□□□ -1.38
YPT52YKR014C MRX10Q05648 414 aa6.44□□□□□ -1.38
YPT52YKR014C RLF2Q12495 606 aa6.44□□□□□ -1.38
YPT52YKR014C AAD14P42884 376 aa6.43□□□□□ -1.38
YPT52YKR014C DAT1P13483 248 aaKnown RBP6.42□□□□□ -1.38
YPT52YKR014C TBS1P38114 1094 aa6.42□□□□□ -1.38
YPT52YKR014C LSC2P53312 427 aa6.42□□□□□ -1.38
YPT52YKR014C UTR2P32623 467 aa6.41□□□□□ -1.38
YPT52YKR014C SPT2P06843 333 aaPredicted RBP6.39□□□□□ -1.39
YPT52YKR014C RDS2P19541 446 aaKnown RBP6.39□□□□□ -1.39
YPT52YKR014C YFL034WP43564 1073 aa6.39□□□□□ -1.39
YPT52YKR014C MIP1P15801 1254 aa6.38□□□□□ -1.39
YPT52YKR014C HAL5P38970 855 aaKnown RBP6.38□□□□□ -1.39
YPT52YKR014C UBP2Q01476 1272 aa6.38□□□□□ -1.39
YPT52YKR014C LCB5Q06147 687 aaKnown RBP6.38□□□□□ -1.39
YPT52YKR014C HDA3Q06623 655 aa6.38□□□□□ -1.39
YPT52YKR014C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
YPT52YKR014C WTM2Q12206 467 aa6.37□□□□□ -1.39
YPT52YKR014C PEP12P32854 288 aa6.36□□□□□ -1.39
YPT52YKR014C DLD1P32891 587 aa6.36□□□□□ -1.39
YPT52YKR014C KTR7P40504 517 aa6.36□□□□□ -1.39
YPT52YKR014C OPT2Q06593 877 aa6.36□□□□□ -1.39
YPT52YKR014C TTI1P36097 1038 aa6.35□□□□□ -1.39
YPT52YKR014C AIM9P40053 627 aaKnown RBP6.35□□□□□ -1.39
YPT52YKR014C SSA4P22202 642 aaKnown RBP6.34□□□□□ -1.39
YPT52YKR014C YJR098CP47139 656 aa6.34□□□□□ -1.39
YPT52YKR014C YDL176WQ12027 708 aa6.34□□□□□ -1.39
YPT52YKR014C TSC13Q99190 310 aa6.34□□□□□ -1.39
YPT52YKR014C GLY1P37303 387 aaKnown RBP6.33□□□□□ -1.4
YPT52YKR014C SCW11P53189 542 aa6.33□□□□□ -1.4
YPT52YKR014C TCB1Q12466 1186 aa6.33□□□□□ -1.4
YPT52YKR014C HAP4P14064 554 aa6.32□□□□□ -1.4
YPT52YKR014C PDI1P17967 522 aaKnown RBP6.32□□□□□ -1.4
YPT52YKR014C CPS1P27614 576 aa6.32□□□□□ -1.4
YPT52YKR014C SLX8P40072 274 aa6.32□□□□□ -1.4
YPT52YKR014C PHO87P25360 923 aa6.31□□□□□ -1.4
YPT52YKR014C TGL4P36165 910 aa6.31□□□□□ -1.4
YPT52YKR014C ALA1P40825 983 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms