RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeastyeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH1YKL148C CSI1Q04368 295 aa14.61□□□□□ -0.07
SDH1YKL148C SPO1P53541 631 aa14.59□□□□□ -0.07
SDH1YKL148C LSP1Q12230 341 aaKnown RBP14.59□□□□□ -0.07
SDH1YKL148C HSP104P31539 908 aaKnown RBP14.58□□□□□ -0.07
SDH1YKL148C NKP2Q06162 153 aa14.58□□□□□ -0.07
SDH1YKL148C BMS1Q08965 1183 aaKnown RBP14.58□□□□□ -0.07
SDH1YKL148C MSP1P28737 362 aa14.58□□□□□ -0.08
SDH1YKL148C SLN1P39928 1220 aaPredicted RBP14.57□□□□□ -0.08
SDH1YKL148C RAD50P12753 1312 aa14.57□□□□□ -0.08
SDH1YKL148C CAB3P36076 571 aa14.56□□□□□ -0.08
SDH1YKL148C FKS3Q04952 1785 aa14.56□□□□□ -0.08
SDH1YKL148C AOS1Q06624 347 aa14.55□□□□□ -0.08
SDH1YKL148C URB1P34241 1764 aaKnown RBP14.55□□□□□ -0.08
SDH1YKL148C RPS19AP07280 144 aaKnown RBP14.54□□□□□ -0.08
SDH1YKL148C RPS19BP07281 144 aaPredicted RBP14.54□□□□□ -0.08
SDH1YKL148C NMD2P38798 1089 aaKnown RBP14.54□□□□□ -0.08
SDH1YKL148C COQ4O13525 335 aa14.54□□□□□ -0.08
SDH1YKL148C RFC1P38630 861 aaKnown RBP14.54□□□□□ -0.08
SDH1YKL148C ITC1P53125 1264 aa14.54□□□□□ -0.08
SDH1YKL148C YMR196WQ04336 1088 aa14.52□□□□□ -0.09
SDH1YKL148C SRS2P12954 1174 aa14.51□□□□□ -0.09
SDH1YKL148C DLD1P32891 587 aa14.51□□□□□ -0.09
SDH1YKL148C CTF4Q01454 927 aa14.5□□□□□ -0.09
SDH1YKL148C ARL1P38116 183 aaKnown RBP14.49□□□□□ -0.09
SDH1YKL148C GCR2Q01722 534 aa14.49□□□□□ -0.09
SDH1YKL148C NOP8Q08287 484 aaPredicted RBP14.48□□□□□ -0.09
SDH1YKL148C TEA1P47988 759 aa14.47□□□□□ -0.09
SDH1YKL148C NSE3Q05541 303 aa14.47□□□□□ -0.09
SDH1YKL148C NUP145P49687 1317 aa14.47□□□□□ -0.09
SDH1YKL148C BRN1P38170 754 aa14.47□□□□□ -0.09
SDH1YKL148C UGA3P26370 528 aa14.46□□□□□ -0.09
SDH1YKL148C RAD24P32641 659 aa14.46□□□□□ -0.09
SDH1YKL148C YGR122WP53272 402 aa14.45□□□□□ -0.1
SDH1YKL148C THI12P42883 340 aa14.44□□□□□ -0.1
SDH1YKL148C THI5P43534 340 aa14.44□□□□□ -0.1
SDH1YKL148C THI11P47183 340 aa14.44□□□□□ -0.1
SDH1YKL148C THI13Q07748 340 aa14.44□□□□□ -0.1
SDH1YKL148C SLM3Q12093 417 aa14.43□□□□□ -0.1
SDH1YKL148C LYS2P07702 1392 aa14.43□□□□□ -0.1
SDH1YKL148C PRP5P21372 849 aaPredicted RBP14.43□□□□□ -0.1
SDH1YKL148C YOL057WQ08225 711 aa14.43□□□□□ -0.1
SDH1YKL148C KCC4P25389 1037 aa14.42□□□□□ -0.1
SDH1YKL148C ROM2P51862 1356 aaKnown RBP14.41□□□□□ -0.1
SDH1YKL148C CDC16P09798 840 aa14.41□□□□□ -0.1
SDH1YKL148C GCD7P32502 381 aaPredicted RBP14.41□□□□□ -0.1
SDH1YKL148C MRP7P12687 371 aa14.41□□□□□ -0.1
SDH1YKL148C KNS1P32350 737 aaPredicted RBP14.41□□□□□ -0.1
SDH1YKL148C EBP2P36049 427 aaKnown RBP14.41□□□□□ -0.1
SDH1YKL148C HXT13P39924 564 aa14.4□□□□□ -0.1
SDH1YKL148C RAD4P14736 754 aa14.39□□□□□ -0.11
SDH1YKL148C NOT3P06102 836 aaKnown RBP14.39□□□□□ -0.11
SDH1YKL148C PRP45P28004 379 aaPredicted RBP14.38□□□□□ -0.11
SDH1YKL148C MSB3P48566 633 aaPredicted RBP14.38□□□□□ -0.11
SDH1YKL148C COG8Q04632 607 aa14.38□□□□□ -0.11
SDH1YKL148C BOI2P39969 1040 aa14.37□□□□□ -0.11
SDH1YKL148C HXT17P53631 564 aa14.37□□□□□ -0.11
SDH1YKL148C RCR1P38212 213 aa14.37□□□□□ -0.11
SDH1YKL148C BDP1P46678 594 aa14.37□□□□□ -0.11
SDH1YKL148C HAP5Q02516 242 aa14.37□□□□□ -0.11
SDH1YKL148C VAS1P07806 1104 aaKnown RBP14.36□□□□□ -0.11
SDH1YKL148C SWC3P31376 625 aa14.36□□□□□ -0.11
SDH1YKL148C HGH1P48362 394 aaKnown RBP14.35□□□□□ -0.11
SDH1YKL148C YDR306CQ06640 478 aa14.35□□□□□ -0.11
SDH1YKL148C XKS1P42826 600 aa14.34□□□□□ -0.11
SDH1YKL148C NPA3P47122 385 aa14.34□□□□□ -0.11
SDH1YKL148C RNR2P09938 399 aaKnown RBP14.33□□□□□ -0.11
SDH1YKL148C VPS20Q04272 221 aa14.32□□□□□ -0.12
SDH1YKL148C MNN4P36044 1178 aa14.31□□□□□ -0.12
SDH1YKL148C DUR1,2P32528 1835 aaKnown RBP14.31□□□□□ -0.12
SDH1YKL148C BDH2P39713 417 aa14.31□□□□□ -0.12
SDH1YKL148C INP54Q08227 384 aaKnown RBP14.31□□□□□ -0.12
SDH1YKL148C TCB1Q12466 1186 aa14.31□□□□□ -0.12
SDH1YKL148C ZDS2P54786 942 aa14.29□□□□□ -0.12
SDH1YKL148C YGL081WP53156 320 aa14.29□□□□□ -0.12
SDH1YKL148C ALE1Q08548 619 aa14.29□□□□□ -0.12
SDH1YKL148C NUP133P36161 1157 aa14.28□□□□□ -0.12
SDH1YKL148C DNM1P54861 757 aa14.28□□□□□ -0.12
SDH1YKL148C TRL1P09880 827 aaKnown RBP14.27□□□□□ -0.12
SDH1YKL148C TCB2P48231 1178 aa14.27□□□□□ -0.12
SDH1YKL148C HST1P53685 503 aa14.27□□□□□ -0.13
SDH1YKL148C CST6P40535 587 aa14.26□□□□□ -0.13
SDH1YKL148C CIR1P42940 261 aa14.25□□□□□ -0.13
SDH1YKL148C RSC1P53236 928 aa14.25□□□□□ -0.13
SDH1YKL148C LCD1Q04377 747 aa14.25□□□□□ -0.13
SDH1YKL148C BIK1P11709 440 aa14.25□□□□□ -0.13
SDH1YKL148C HRQ1Q05549 1077 aa14.25□□□□□ -0.13
SDH1YKL148C NCB2Q92317 146 aa14.24□□□□□ -0.13
SDH1YKL148C PIL1P53252 339 aaKnown RBP14.23□□□□□ -0.13
SDH1YKL148C MEC3Q02574 474 aa14.23□□□□□ -0.13
SDH1YKL148C RMD1Q03441 430 aa14.23□□□□□ -0.13
SDH1YKL148C SWI1P09547 1314 aa14.23□□□□□ -0.13
SDH1YKL148C CTR9P89105 1077 aa14.22□□□□□ -0.13
SDH1YKL148C FPR4Q06205 392 aaPredicted RBP14.22□□□□□ -0.13
SDH1YKL148C MIF2P35201 549 aa14.21□□□□□ -0.13
SDH1YKL148C ECM21P38167 1117 aaKnown RBP14.21□□□□□ -0.13
SDH1YKL148C RSF2P46974 1380 aa14.21□□□□□ -0.13
SDH1YKL148C RKM3P38222 552 aa14.21□□□□□ -0.14
SDH1YKL148C RVS167P39743 482 aaKnown RBP14.21□□□□□ -0.14
SDH1YKL148C PDR18P53756 1333 aa14.21□□□□□ -0.14
SDH1YKL148C RPN12P32496 274 aa14.2□□□□□ -0.14
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms