RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W SLI15P38283 698 aa4.91□□□□□ -1.62
UBP12YJL197W SRP40P32583 406 aaPredicted RBP4.91□□□□□ -1.62
UBP12YJL197W MET1P36150 593 aa4.91□□□□□ -1.62
UBP12YJL197W TFG1P41895 735 aaPredicted RBP4.91□□□□□ -1.62
UBP12YJL197W YGL081WP53156 320 aa4.9□□□□□ -1.62
UBP12YJL197W GAS4Q08271 471 aa4.9□□□□□ -1.62
UBP12YJL197W MET4P32389 672 aa4.9□□□□□ -1.62
UBP12YJL197W QDR1P40475 563 aa4.9□□□□□ -1.62
UBP12YJL197W ALG12P53730 551 aa4.9□□□□□ -1.62
UBP12YJL197W NOP2P40991 618 aaKnown RBP4.9□□□□□ -1.63
UBP12YJL197W PIN2Q12057 282 aa4.9□□□□□ -1.63
UBP12YJL197W MNL2Q12205 849 aa4.9□□□□□ -1.63
UBP12YJL197W CLN2P20438 545 aa4.89□□□□□ -1.63
UBP12YJL197W HTA1P04911 132 aaKnown RBP4.89□□□□□ -1.63
UBP12YJL197W HTA2P04912 132 aa4.89□□□□□ -1.63
UBP12YJL197W RPN4Q03465 531 aa4.89□□□□□ -1.63
UBP12YJL197W FRT1Q99332 602 aa4.89□□□□□ -1.63
UBP12YJL197W CIT2P08679 460 aa4.89□□□□□ -1.63
UBP12YJL197W GLO3P38682 493 aaKnown RBP4.89□□□□□ -1.63
UBP12YJL197W EMP47P43555 445 aa4.89□□□□□ -1.63
UBP12YJL197W ROM1P53046 1155 aa4.89□□□□□ -1.63
UBP12YJL197W YKL091CP33324 310 aaKnown RBP4.88□□□□□ -1.63
UBP12YJL197W DCW1P36091 449 aa4.88□□□□□ -1.63
UBP12YJL197W NAB3P38996 802 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
UBP12YJL197W TIF4632P39936 914 aaKnown RBP4.88□□□□□ -1.63
UBP12YJL197W VAC8P39968 578 aa4.88□□□□□ -1.63
UBP12YJL197W IOC3P43596 787 aa4.88□□□□□ -1.63
UBP12YJL197W POB3Q04636 552 aaKnown RBP4.88□□□□□ -1.63
UBP12YJL197W FRA1Q07825 749 aa4.88□□□□□ -1.63
UBP12YJL197W STI1P15705 589 aaKnown RBP RIP-Chip data4.88□□□□□ -1.63not detected
UBP12YJL197W SPR3P41901 512 aa4.88□□□□□ -1.63
UBP12YJL197W ALD3P54114 506 aa4.88□□□□□ -1.63
UBP12YJL197W VPS16Q03308 798 aa4.88□□□□□ -1.63
UBP12YJL197W NSE3Q05541 303 aa4.88□□□□□ -1.63
UBP12YJL197W PUN1Q06991 263 aa4.88□□□□□ -1.63
UBP12YJL197W ACS2P52910 683 aaKnown RBP4.88□□□□□ -1.63
UBP12YJL197W YGL015CP33199 130 aa4.87□□□□□ -1.63
UBP12YJL197W MAD1P40957 749 aa4.87□□□□□ -1.63
UBP12YJL197W TUM1Q08686 304 aaKnown RBP4.87□□□□□ -1.63
UBP12YJL197W LSO1Q3E827 93 aa4.87□□□□□ -1.63
UBP12YJL197W DAN4P47179 1161 aa4.87□□□□□ -1.63
UBP12YJL197W ALD6P54115 500 aaKnown RBP4.87□□□□□ -1.63
UBP12YJL197W STE20Q03497 939 aaKnown RBP4.87□□□□□ -1.63
UBP12YJL197W TRS33Q99394 268 aa4.87□□□□□ -1.63
UBP12YJL197W SSB1P11484 613 aaKnown RBP4.86□□□□□ -1.63
UBP12YJL197W GUT2P32191 649 aa4.86□□□□□ -1.63
UBP12YJL197W SSB2P40150 613 aaKnown RBP4.86□□□□□ -1.63
UBP12YJL197W CDC73Q06697 393 aa4.86□□□□□ -1.63
UBP12YJL197W VAN1P23642 535 aa4.86□□□□□ -1.63
UBP12YJL197W ISF1P32488 338 aa4.86□□□□□ -1.63
UBP12YJL197W FYV10P40492 516 aa4.86□□□□□ -1.63
UBP12YJL197W APL6P46682 809 aa4.86□□□□□ -1.63
UBP12YJL197W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
UBP12YJL197W TBF1Q02457 562 aa4.86□□□□□ -1.63
UBP12YJL197W TSC13Q99190 310 aa4.86□□□□□ -1.63
UBP12YJL197W TSR4P25040 408 aa4.86□□□□□ -1.63
UBP12YJL197W RTT106P40161 455 aa4.86□□□□□ -1.63
UBP12YJL197W TGL3P40308 642 aa4.86□□□□□ -1.63
UBP12YJL197W SSF2Q12153 453 aaPredicted RBP4.86□□□□□ -1.63
UBP12YJL197W YOL036WQ08206 761 aa4.85□□□□□ -1.63
UBP12YJL197W MIP1P15801 1254 aa4.85□□□□□ -1.63
UBP12YJL197W UTP14Q04500 899 aaKnown RBP4.85□□□□□ -1.63
UBP12YJL197W WRS1Q12109 432 aaKnown RBP4.85□□□□□ -1.63
UBP12YJL197W TEC1P18412 486 aa4.85□□□□□ -1.63
UBP12YJL197W MNR2P35724 969 aa4.85□□□□□ -1.63
UBP12YJL197W BUD6P41697 788 aa4.85□□□□□ -1.63
UBP12YJL197W TRS120Q04183 1289 aa4.85□□□□□ -1.63
UBP12YJL197W YFL034WP43564 1073 aa4.84□□□□□ -1.63
UBP12YJL197W ESF1Q06344 628 aaKnown RBP4.84□□□□□ -1.64
UBP12YJL197W PHO4P07270 312 aaKnown RBP4.83□□□□□ -1.64
UBP12YJL197W GCD6P32501 712 aaKnown RBP4.83□□□□□ -1.64
UBP12YJL197W YOR131CQ12486 218 aa4.83□□□□□ -1.64
UBP12YJL197W SOH1P38633 127 aa4.83□□□□□ -1.64
UBP12YJL197W UBP1P25037 809 aa4.82□□□□□ -1.64
UBP12YJL197W YPR084WQ06821 456 aa4.82□□□□□ -1.64
UBP12YJL197W PBP2P38151 413 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
UBP12YJL197W GTT3P39996 337 aa4.82□□□□□ -1.64
UBP12YJL197W GRX4P32642 244 aa4.82□□□□□ -1.64
UBP12YJL197W TPM2P40414 161 aa4.82□□□□□ -1.64
UBP12YJL197W UFD2P54860 961 aa4.82□□□□□ -1.64
UBP12YJL197W BDF2Q07442 638 aa4.82□□□□□ -1.64
UBP12YJL197W YRR1Q12172 810 aa4.82□□□□□ -1.64
UBP12YJL197W MSB4Q12317 492 aa4.82□□□□□ -1.64
UBP12YJL197W RPA14P50106 137 aa4.81□□□□□ -1.64
UBP12YJL197W YGR161W-CQ3E744 92 aa4.81□□□□□ -1.64
UBP12YJL197W MST1P07236 462 aa4.81□□□□□ -1.64
UBP12YJL197W RPT1P33299 467 aaKnown RBP4.81□□□□□ -1.64
UBP12YJL197W VPS35P34110 944 aa4.81□□□□□ -1.64
UBP12YJL197W FIG4P42837 879 aa4.81□□□□□ -1.64
UBP12YJL197W CWH41P53008 833 aa4.81□□□□□ -1.64
UBP12YJL197W CDC53Q12018 815 aaKnown RBP4.81□□□□□ -1.64
UBP12YJL197W DPL1Q05567 589 aa4.8□□□□□ -1.64
UBP12YJL197W GIN4Q12263 1142 aa4.8□□□□□ -1.64
UBP12YJL197W PDR1P12383 1068 aa4.8□□□□□ -1.64
UBP12YJL197W YEL023CP39992 682 aa4.8□□□□□ -1.64
UBP12YJL197W TPO2P53283 614 aa4.8□□□□□ -1.64
UBP12YJL197W YDL206WQ12424 762 aa4.8□□□□□ -1.64
UBP12YJL197W MCM2P29469 868 aa4.8□□□□□ -1.64
UBP12YJL197W KEX2P13134 814 aa4.79□□□□□ -1.64
UBP12YJL197W YGR122WP53272 402 aa4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms