RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeastyeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFK1YGR240C QCR6P00127 147 aa5.34□□□□□ -1.55
PFK1YGR240C SSB1P11484 613 aaKnown RBP5.34□□□□□ -1.55
PFK1YGR240C CDC3P32457 520 aaKnown RBP5.34□□□□□ -1.55
PFK1YGR240C SSB2P40150 613 aaKnown RBP5.34□□□□□ -1.55
PFK1YGR240C SPT2P06843 333 aaPredicted RBP5.34□□□□□ -1.56
PFK1YGR240C BLI1P35727 113 aa5.34□□□□□ -1.56
PFK1YGR240C RPL34AP87262 121 aaPredicted RBP5.34□□□□□ -1.56
PFK1YGR240C YAH1Q12184 172 aaKnown RBP5.34□□□□□ -1.56
PFK1YGR240C DNF3Q12674 1656 aa5.33□□□□□ -1.56
PFK1YGR240C ESF2P53743 316 aaKnown RBP5.33□□□□□ -1.56
PFK1YGR240C TFB3Q03290 321 aa5.33□□□□□ -1.56
PFK1YGR240C YLR271WQ06152 274 aa5.33□□□□□ -1.56
PFK1YGR240C TFG1P41895 735 aaPredicted RBP5.33□□□□□ -1.56
PFK1YGR240C SET1P38827 1080 aaKnown RBP5.32□□□□□ -1.56
PFK1YGR240C COG4Q06096 861 aa5.32□□□□□ -1.56
PFK1YGR240C RPL17AP05740 184 aaKnown RBP5.32□□□□□ -1.56
PFK1YGR240C KAR1P11927 433 aa5.32□□□□□ -1.56
PFK1YGR240C PPG1P32838 368 aa5.32□□□□□ -1.56
PFK1YGR240C RPL17BP46990 184 aaKnown RBP5.32□□□□□ -1.56
PFK1YGR240C ERP4Q12450 207 aa5.32□□□□□ -1.56
PFK1YGR240C OPI1P21957 404 aa5.31□□□□□ -1.56
PFK1YGR240C PWP2P25635 923 aaKnown RBP5.31□□□□□ -1.56
PFK1YGR240C DNM1P54861 757 aa5.31□□□□□ -1.56
PFK1YGR240C PBS2P08018 668 aa5.31□□□□□ -1.56
PFK1YGR240C YGL081WP53156 320 aa5.31□□□□□ -1.56
PFK1YGR240C ENT2Q05785 613 aa5.31□□□□□ -1.56
PFK1YGR240C SYH1Q02875 849 aaKnown RBP5.31□□□□□ -1.56
PFK1YGR240C RTC1Q08281 1341 aa5.3□□□□□ -1.56
PFK1YGR240C RNA1P11745 407 aaKnown RBP5.3□□□□□ -1.56
PFK1YGR240C HSC82P15108 705 aaKnown RBP5.3□□□□□ -1.56
PFK1YGR240C NMD3P38861 518 aaKnown RBP5.3□□□□□ -1.56
PFK1YGR240C SSF2Q12153 453 aaPredicted RBP5.3□□□□□ -1.56
PFK1YGR240C NFU1P32860 256 aa5.3□□□□□ -1.56
PFK1YGR240C STM1P39015 273 aaKnown RBP5.3□□□□□ -1.56
PFK1YGR240C PKH1Q03407 766 aa5.3□□□□□ -1.56
PFK1YGR240C YOL098CQ12496 1037 aa5.3□□□□□ -1.56
PFK1YGR240C ALD2P47771 506 aa5.29□□□□□ -1.56
PFK1YGR240C NKP1Q12493 238 aa5.29□□□□□ -1.56
PFK1YGR240C MAK16P10962 306 aaPredicted RBP5.29□□□□□ -1.56
PFK1YGR240C YIL055CP40523 627 aaKnown RBP5.29□□□□□ -1.56
PFK1YGR240C GRX3Q03835 250 aa5.28□□□□□ -1.56
PFK1YGR240C OXP1P28273 1286 aa5.28□□□□□ -1.56
PFK1YGR240C OYE2Q03558 400 aaKnown RBP5.28□□□□□ -1.56
PFK1YGR240C TY4B-PA0A0B7P3V8 1104 aa5.28□□□□□ -1.56
PFK1YGR240C GDE1Q02979 1223 aa5.28□□□□□ -1.56
PFK1YGR240C CEF1Q03654 590 aaPredicted RBP5.28□□□□□ -1.56
PFK1YGR240C TY4A-HQ6Q5P6 413 aa5.28□□□□□ -1.56
PFK1YGR240C BIM1P40013 344 aa5.27□□□□□ -1.57
PFK1YGR240C FAF1P40546 346 aaPredicted RBP5.27□□□□□ -1.57
PFK1YGR240C HAT1Q12341 374 aa5.27□□□□□ -1.57
PFK1YGR240C ENP1P38333 483 aaKnown RBP5.27□□□□□ -1.57
PFK1YGR240C SNU66Q12420 587 aaPredicted RBP5.27□□□□□ -1.57
PFK1YGR240C TY1B-AO13527 1196 aaKnown RBP5.26□□□□□ -1.57
PFK1YGR240C PKC1P24583 1151 aa5.26□□□□□ -1.57
PFK1YGR240C MAL31P38156 614 aa5.26□□□□□ -1.57
PFK1YGR240C NSE3Q05541 303 aa5.26□□□□□ -1.57
PFK1YGR240C NOP53Q12080 455 aaKnown RBP5.26□□□□□ -1.57
PFK1YGR240C GLN1P32288 370 aaKnown RBP5.26□□□□□ -1.57
PFK1YGR240C GRX4P32642 244 aa5.26□□□□□ -1.57
PFK1YGR240C YDR341CQ05506 607 aaKnown RBP5.26□□□□□ -1.57
PFK1YGR240C SVF1Q05515 481 aa5.26□□□□□ -1.57
PFK1YGR240C CDC11P32458 415 aa5.25□□□□□ -1.57
PFK1YGR240C RPN12P32496 274 aa5.25□□□□□ -1.57
PFK1YGR240C IPL1P38991 367 aa5.25□□□□□ -1.57
PFK1YGR240C ALG12P53730 551 aa5.25□□□□□ -1.57
PFK1YGR240C MUM2P38236 366 aa5.25□□□□□ -1.57
PFK1YGR240C IMH1Q06704 911 aaKnown RBP5.25□□□□□ -1.57
PFK1YGR240C NOB1Q08444 459 aaKnown RBP5.25□□□□□ -1.57
PFK1YGR240C PUS1Q12211 544 aaKnown RBP5.25□□□□□ -1.57
PFK1YGR240C BCK1Q01389 1478 aa5.24□□□□□ -1.57
PFK1YGR240C REB1P21538 810 aa5.24□□□□□ -1.57
PFK1YGR240C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
PFK1YGR240C CPS1P27614 576 aa5.24□□□□□ -1.57
PFK1YGR240C PPX1P38698 397 aa5.24□□□□□ -1.57
PFK1YGR240C ATG32P40458 529 aa5.24□□□□□ -1.57
PFK1YGR240C SVL3Q03088 825 aaKnown RBP5.24□□□□□ -1.57
PFK1YGR240C PAF1P38351 445 aa5.24□□□□□ -1.57
PFK1YGR240C TAF1P46677 1066 aa5.24□□□□□ -1.57
PFK1YGR240C YJL007CP47080 104 aa5.24□□□□□ -1.57
PFK1YGR240C MDM1Q01846 1127 aa5.24□□□□□ -1.57
PFK1YGR240C MAK21Q12176 1025 aaKnown RBP5.24□□□□□ -1.57
PFK1YGR240C DIT2P21595 489 aa5.23□□□□□ -1.57
PFK1YGR240C CST9Q06032 482 aa5.23□□□□□ -1.57
PFK1YGR240C BIO2P32451 375 aa5.23□□□□□ -1.57
PFK1YGR240C SPT21P35209 758 aa5.23□□□□□ -1.57
PFK1YGR240C FUI1P38196 639 aa5.23□□□□□ -1.57
PFK1YGR240C DJP1P40564 432 aa5.23□□□□□ -1.57
PFK1YGR240C HOS2P53096 452 aaPredicted RBP5.23□□□□□ -1.57
PFK1YGR240C POB3Q04636 552 aaKnown RBP5.23□□□□□ -1.57
PFK1YGR240C YLR257WQ06146 321 aaKnown RBP5.23□□□□□ -1.57
PFK1YGR240C TY1B-NL2Q99337 1749 aaKnown RBP5.23□□□□□ -1.57
PFK1YGR240C CIT2P08679 460 aa5.22□□□□□ -1.57
PFK1YGR240C TRX2P22803 104 aaKnown RBP5.22□□□□□ -1.57
PFK1YGR240C SEC6P32844 805 aa5.22□□□□□ -1.57
PFK1YGR240C VPS24P36095 224 aaKnown RBP5.22□□□□□ -1.57
PFK1YGR240C GRX7P38068 203 aa5.22□□□□□ -1.57
PFK1YGR240C SEC27P41811 889 aaKnown RBP5.22□□□□□ -1.57
PFK1YGR240C SRP40P32583 406 aaPredicted RBP5.22□□□□□ -1.57
PFK1YGR240C YAP3P38749 330 aa5.22□□□□□ -1.57
PFK1YGR240C NUP42P49686 430 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms