RNA–Protein interactions for RNA: YGR040W

KSS1, Transcript of Mitogen-activated protein kinase (MAPK), yeastyeast

Gene KSS1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSS1YGR040W TY1B-DR3Q99231 1755 aa8.42□□□□□ -1.06
KSS1YGR040W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
KSS1YGR040W TBF1Q02457 562 aa8.41□□□□□ -1.06
KSS1YGR040W LAM6Q08001 693 aa8.41□□□□□ -1.06
KSS1YGR040W SCJ1P25303 377 aa8.4□□□□□ -1.06
KSS1YGR040W CST6P40535 587 aa8.4□□□□□ -1.06
KSS1YGR040W PUS6P53294 404 aa8.4□□□□□ -1.06
KSS1YGR040W SNQ2P32568 1501 aaKnown RBP8.39□□□□□ -1.07
KSS1YGR040W KTR1P27810 393 aaKnown RBP8.39□□□□□ -1.07
KSS1YGR040W TY2B-BQ12491 1770 aa8.39□□□□□ -1.07
KSS1YGR040W SPP41P38904 1435 aa8.38□□□□□ -1.07
KSS1YGR040W MOD5P07884 428 aa8.38□□□□□ -1.07
KSS1YGR040W TRM1P15565 570 aaKnown RBP8.38□□□□□ -1.07
KSS1YGR040W ESS1P22696 170 aa8.38□□□□□ -1.07
KSS1YGR040W KXD1P53158 218 aa8.38□□□□□ -1.07
KSS1YGR040W TYW1Q08960 810 aaKnown RBP8.38□□□□□ -1.07
KSS1YGR040W TPD3P31383 635 aa8.37□□□□□ -1.07
KSS1YGR040W BDP1P46678 594 aa8.37□□□□□ -1.07
KSS1YGR040W RPA14P50106 137 aa8.36□□□□□ -1.07
KSS1YGR040W FRK1Q03002 865 aaPredicted RBP8.36□□□□□ -1.07
KSS1YGR040W PKH3Q03306 898 aaPredicted RBP8.35□□□□□ -1.07
KSS1YGR040W ALR1Q08269 859 aa8.35□□□□□ -1.07
KSS1YGR040W YDL206WQ12424 762 aa8.35□□□□□ -1.07
KSS1YGR040W PDC1P06169 563 aaKnown RBP8.34□□□□□ -1.07
KSS1YGR040W YJU3P28321 313 aa8.34□□□□□ -1.07
KSS1YGR040W RRD1P40454 393 aaKnown RBP8.34□□□□□ -1.07
KSS1YGR040W SRC1Q03707 834 aa8.34□□□□□ -1.07
KSS1YGR040W TY1B-BRQ12193 1756 aa8.34□□□□□ -1.07
KSS1YGR040W TY1B-GR3Q12316 1755 aa8.34□□□□□ -1.07
KSS1YGR040W TY1B-ORQ92393 1755 aa8.34□□□□□ -1.07
KSS1YGR040W TY1B-HO13535 1793 aa8.33□□□□□ -1.08
KSS1YGR040W TY1B-DR5P0C2I2 1755 aa8.33□□□□□ -1.08
KSS1YGR040W TY1B-DR6P0C2I3 1755 aa8.33□□□□□ -1.08
KSS1YGR040W TY1B-LR2P0C2I5 1755 aa8.33□□□□□ -1.08
KSS1YGR040W TY1B-LR3P0C2I6 1755 aaKnown RBP8.33□□□□□ -1.08
KSS1YGR040W TY1B-PR1P0C2I9 1755 aaKnown RBP8.33□□□□□ -1.08
KSS1YGR040W TY1B-PR2P0C2J0 1756 aa8.33□□□□□ -1.08
KSS1YGR040W TY1B-PR3P0C2J1 1755 aaKnown RBP8.33□□□□□ -1.08
KSS1YGR040W TY1B-JR1P47098 1755 aa8.33□□□□□ -1.08
KSS1YGR040W TY1B-ML2Q03434 1755 aaKnown RBP8.33□□□□□ -1.08
KSS1YGR040W TY1B-ER1Q03612 1755 aa8.33□□□□□ -1.08
KSS1YGR040W TY1B-ML1Q04711 1755 aaKnown RBP8.33□□□□□ -1.08
KSS1YGR040W TY1B-GR2Q12269 1755 aa8.33□□□□□ -1.08
KSS1YGR040W TY1B-OLQ12273 1755 aa8.33□□□□□ -1.08
KSS1YGR040W TY1B-PLQ12414 1755 aaKnown RBP8.33□□□□□ -1.08
KSS1YGR040W IKI3Q06706 1349 aaKnown RBP8.32□□□□□ -1.08
KSS1YGR040W CDC25P04821 1589 aa8.32□□□□□ -1.08
KSS1YGR040W TSC11P40061 1430 aa8.32□□□□□ -1.08
KSS1YGR040W TRM732Q03496 1420 aa8.32□□□□□ -1.08
KSS1YGR040W HXT10P43581 546 aa8.32□□□□□ -1.08
KSS1YGR040W YPR097WQ06839 1073 aa8.32□□□□□ -1.08
KSS1YGR040W PAN1P32521 1480 aa8.32□□□□□ -1.08
KSS1YGR040W HPC2Q01448 625 aa8.31□□□□□ -1.08
KSS1YGR040W ARG8P18544 423 aa8.3□□□□□ -1.08
KSS1YGR040W RSC30P38781 883 aa8.3□□□□□ -1.08
KSS1YGR040W TRK1P12685 1235 aa8.29□□□□□ -1.08
KSS1YGR040W GUA1P38625 525 aaKnown RBP8.29□□□□□ -1.08
KSS1YGR040W HED1Q03937 162 aa8.29□□□□□ -1.08
KSS1YGR040W RAD59Q12223 238 aa8.29□□□□□ -1.08
KSS1YGR040W MLP2P40457 1679 aa8.29□□□□□ -1.08
KSS1YGR040W VTH1P40438 1549 aa8.29□□□□□ -1.08
KSS1YGR040W VTH2P40890 1549 aa8.29□□□□□ -1.08
KSS1YGR040W PDR15Q04182 1529 aaKnown RBP8.28□□□□□ -1.08
KSS1YGR040W GEA1P47102 1408 aaPredicted RBP8.27□□□□□ -1.09
KSS1YGR040W RTT106P40161 455 aa8.26□□□□□ -1.09
KSS1YGR040W SNT2P53127 1403 aa8.25□□□□□ -1.09
KSS1YGR040W CDC4P07834 779 aa8.24□□□□□ -1.09
KSS1YGR040W BRL1P38770 471 aa8.24□□□□□ -1.09
KSS1YGR040W CLA4P48562 842 aa8.24□□□□□ -1.09
KSS1YGR040W SYH1Q02875 849 aaKnown RBP8.22□□□□□ -1.09
KSS1YGR040W PUS5Q06244 254 aa8.22□□□□□ -1.09
KSS1YGR040W ULS1Q08562 1619 aa8.21□□□□□ -1.09
KSS1YGR040W AIR1P40507 360 aaKnown RBP8.21□□□□□ -1.1
KSS1YGR040W TY1B-JR2P47100 1755 aaKnown RBP8.2□□□□□ -1.1
KSS1YGR040W TY1B-ER2Q03619 1755 aa8.2□□□□□ -1.1
KSS1YGR040W TY1B-MR1Q04214 1755 aa8.2□□□□□ -1.1
KSS1YGR040W TY1B-MR2Q04670 1755 aaKnown RBP8.2□□□□□ -1.1
KSS1YGR040W TY1B-LR1Q12088 1755 aaKnown RBP8.2□□□□□ -1.1
KSS1YGR040W TY1B-NL1Q12112 1755 aa8.2□□□□□ -1.1
KSS1YGR040W TY1B-GR1Q12141 1755 aa8.2□□□□□ -1.1
KSS1YGR040W TY1B-BLQ12490 1755 aa8.2□□□□□ -1.1
KSS1YGR040W ESC1Q03661 1658 aaKnown RBP8.19□□□□□ -1.1
KSS1YGR040W MAK16P10962 306 aaPredicted RBP8.18□□□□□ -1.1
KSS1YGR040W TFB3Q03290 321 aa8.18□□□□□ -1.1
KSS1YGR040W SSM4P40318 1319 aa8.18□□□□□ -1.1
KSS1YGR040W DNF1P32660 1571 aa8.18□□□□□ -1.1
KSS1YGR040W VAC17P25591 423 aa8.17□□□□□ -1.1
KSS1YGR040W KIP2P28743 706 aa8.17□□□□□ -1.1
KSS1YGR040W CSE4P36012 229 aa8.17□□□□□ -1.1
KSS1YGR040W HGH1P48362 394 aaKnown RBP8.17□□□□□ -1.1
KSS1YGR040W IXR1P33417 597 aa8.16□□□□□ -1.1
KSS1YGR040W NUP170P38181 1502 aa8.16□□□□□ -1.1
KSS1YGR040W NAF1P53919 492 aaKnown RBP8.16□□□□□ -1.1
KSS1YGR040W RPA190P10964 1664 aaKnown RBP8.15□□□□□ -1.1
KSS1YGR040W GEA2P39993 1459 aaKnown RBP8.15□□□□□ -1.1
KSS1YGR040W MET32Q12041 191 aa8.15□□□□□ -1.1
KSS1YGR040W BRE2P43132 505 aa8.14□□□□□ -1.11
KSS1YGR040W SPT5P27692 1063 aaKnown RBP8.13□□□□□ -1.11
KSS1YGR040W YBL036CP38197 257 aa8.13□□□□□ -1.11
KSS1YGR040W VPS15P22219 1454 aa8.13□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms