RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W SUB1P54000 292 aaKnown RBP7.14□□□□□ -1.27
PDE1YGL248W GLN1P32288 370 aaKnown RBP7.13□□□□□ -1.27
PDE1YGL248W UGA3P26370 528 aa7.12□□□□□ -1.27
PDE1YGL248W IXR1P33417 597 aa7.12□□□□□ -1.27
PDE1YGL248W MNN4P36044 1178 aa7.12□□□□□ -1.27
PDE1YGL248W GEF1P37020 779 aa7.12□□□□□ -1.27
PDE1YGL248W NUG1P40010 520 aaKnown RBP7.12□□□□□ -1.27
PDE1YGL248W GLC3P32775 704 aa7.11□□□□□ -1.27
PDE1YGL248W YNR021WP53723 404 aaKnown RBP7.11□□□□□ -1.27
PDE1YGL248W SSA1P10591 642 aaKnown RBP7.1□□□□□ -1.27
PDE1YGL248W ESS1P22696 170 aa7.1□□□□□ -1.27
PDE1YGL248W BRN1P38170 754 aa7.1□□□□□ -1.27
PDE1YGL248W VPS72Q03388 795 aa7.1□□□□□ -1.27
PDE1YGL248W YDL176WQ12027 708 aa7.1□□□□□ -1.27
PDE1YGL248W KIN1P13185 1064 aa7.09□□□□□ -1.27
PDE1YGL248W ASF1P32447 279 aa7.09□□□□□ -1.27
PDE1YGL248W PTK2P47116 818 aaKnown RBP7.09□□□□□ -1.27
PDE1YGL248W SRF1Q12516 437 aa7.09□□□□□ -1.27
PDE1YGL248W MET10P39692 1035 aa7.08□□□□□ -1.28
PDE1YGL248W MRT4P33201 236 aaKnown RBP7.07□□□□□ -1.28
PDE1YGL248W SLD2P34252 453 aa7.06□□□□□ -1.28
PDE1YGL248W TYW1Q08960 810 aaKnown RBP7.06□□□□□ -1.28
PDE1YGL248W YJU3P28321 313 aa7.05□□□□□ -1.28
PDE1YGL248W RTS3P53289 263 aa7.05□□□□□ -1.28
PDE1YGL248W SWE1P32944 819 aa7.04□□□□□ -1.28
PDE1YGL248W RTT106P40161 455 aa7.03□□□□□ -1.28
PDE1YGL248W YLR346CQ06139 101 aa7.03□□□□□ -1.28
PDE1YGL248W OPT2Q06593 877 aa7.03□□□□□ -1.28
PDE1YGL248W GIN4Q12263 1142 aa7.03□□□□□ -1.28
PDE1YGL248W VAC17P25591 423 aa7.02□□□□□ -1.29
PDE1YGL248W MRX12P47084 519 aa7.02□□□□□ -1.29
PDE1YGL248W KRI1P42846 591 aaKnown RBP7.01□□□□□ -1.29
PDE1YGL248W CAF120P53836 1060 aa7.01□□□□□ -1.29
PDE1YGL248W FAR11P53917 953 aa7.01□□□□□ -1.29
PDE1YGL248W DOS2P54858 310 aa7.01□□□□□ -1.29
PDE1YGL248W PKH3Q03306 898 aaPredicted RBP7.01□□□□□ -1.29
PDE1YGL248W YTA7P40340 1379 aa7□□□□□ -1.29
PDE1YGL248W AIM7Q12156 149 aa7□□□□□ -1.29
PDE1YGL248W KTR1P27810 393 aaKnown RBP6.99□□□□□ -1.29
PDE1YGL248W RSC30P38781 883 aa6.99□□□□□ -1.29
PDE1YGL248W YFR016CP43597 1233 aaKnown RBP6.99□□□□□ -1.29
PDE1YGL248W NUP85P46673 744 aa6.99□□□□□ -1.29
PDE1YGL248W ATG36P46983 293 aa6.99□□□□□ -1.29
PDE1YGL248W MDG1P53885 366 aa6.99□□□□□ -1.29
PDE1YGL248W PAM1P37304 830 aaKnown RBP6.98□□□□□ -1.29
PDE1YGL248W ACO2P39533 789 aa6.98□□□□□ -1.29
PDE1YGL248W OSW7P43611 510 aa6.98□□□□□ -1.29
PDE1YGL248W SUB2Q07478 446 aaKnown RBP6.98□□□□□ -1.29
PDE1YGL248W ARG8P18544 423 aa6.97□□□□□ -1.29
PDE1YGL248W SIS2P36024 562 aa6.97□□□□□ -1.29
PDE1YGL248W SPC42P36094 363 aa6.97□□□□□ -1.29
PDE1YGL248W GLY1P37303 387 aaKnown RBP6.96□□□□□ -1.3
PDE1YGL248W MIP1P15801 1254 aa6.95□□□□□ -1.3
PDE1YGL248W YBL086CP38177 466 aa6.95□□□□□ -1.3
PDE1YGL248W CSN12P47130 423 aa6.95□□□□□ -1.3
PDE1YGL248W APP1P53933 587 aa6.95□□□□□ -1.3
PDE1YGL248W ARG82P07250 355 aa6.94□□□□□ -1.3
PDE1YGL248W NAB3P38996 802 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
PDE1YGL248W SCW11P53189 542 aa6.94□□□□□ -1.3
PDE1YGL248W ITT1Q04638 464 aa6.94□□□□□ -1.3
PDE1YGL248W AAD14P42884 376 aa6.93□□□□□ -1.3
PDE1YGL248W LSC2P53312 427 aa6.92□□□□□ -1.3
PDE1YGL248W TY1A-BLQ12266 440 aa6.92□□□□□ -1.3
PDE1YGL248W HEM3P28789 327 aa6.91□□□□□ -1.3
PDE1YGL248W EMW1P42842 904 aaKnown RBP6.91□□□□□ -1.3
PDE1YGL248W YJR008WP47085 338 aa6.91□□□□□ -1.3
PDE1YGL248W RRN6P32786 894 aa6.9□□□□□ -1.3
PDE1YGL248W GUA1P38625 525 aaKnown RBP6.9□□□□□ -1.3
PDE1YGL248W YIR007WP40566 764 aa6.9□□□□□ -1.3
PDE1YGL248W FIG4P42837 879 aa6.9□□□□□ -1.3
PDE1YGL248W RPS0BP46654 252 aaKnown RBP6.9□□□□□ -1.3
PDE1YGL248W TPO2P53283 614 aa6.9□□□□□ -1.3
PDE1YGL248W UBP2Q01476 1272 aa6.89□□□□□ -1.31
PDE1YGL248W RAD59Q12223 238 aa6.89□□□□□ -1.31
PDE1YGL248W DLD1P32891 587 aa6.88□□□□□ -1.31
PDE1YGL248W SSF1P38789 453 aaPredicted RBP6.88□□□□□ -1.31
PDE1YGL248W YAF9P53930 226 aa6.88□□□□□ -1.31
PDE1YGL248W OCA5P38738 679 aa6.87□□□□□ -1.31
PDE1YGL248W YJR098CP47139 656 aa6.87□□□□□ -1.31
PDE1YGL248W YGR035CP53222 116 aa6.87□□□□□ -1.31
PDE1YGL248W HPC2Q01448 625 aa6.87□□□□□ -1.31
PDE1YGL248W FPR4Q06205 392 aaPredicted RBP6.87□□□□□ -1.31
PDE1YGL248W TEC1P18412 486 aa6.85□□□□□ -1.31
PDE1YGL248W SSA4P22202 642 aaKnown RBP6.85□□□□□ -1.31
PDE1YGL248W MKS1P34072 584 aa6.85□□□□□ -1.31
PDE1YGL248W NMD2P38798 1089 aaKnown RBP6.85□□□□□ -1.31
PDE1YGL248W BUD21Q08492 214 aaPredicted RBP6.85□□□□□ -1.31
PDE1YGL248W DFG5Q05031 458 aa6.84□□□□□ -1.31
PDE1YGL248W TCB1Q12466 1186 aa6.84□□□□□ -1.31
PDE1YGL248W SSA2P10592 639 aaKnown RBP6.83□□□□□ -1.32
PDE1YGL248W TRK2P28584 889 aa6.83□□□□□ -1.32
PDE1YGL248W HPF1Q05164 967 aa6.83□□□□□ -1.32
PDE1YGL248W TOA1P32773 286 aa6.81□□□□□ -1.32
PDE1YGL248W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
PDE1YGL248W CDC3P32457 520 aaKnown RBP6.8□□□□□ -1.32
PDE1YGL248W NNF1P47149 201 aa6.8□□□□□ -1.32
PDE1YGL248W RPL34AP87262 121 aaPredicted RBP6.8□□□□□ -1.32
PDE1YGL248W TFB3Q03290 321 aa6.8□□□□□ -1.32
PDE1YGL248W YPR084WQ06821 456 aa6.8□□□□□ -1.32
PDE1YGL248W BDS1Q08347 646 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms