RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W LYS5P50113 272 aa1.88□□□□□ -2.11
CSE1YGL238W TY1A-MR1Q04215 440 aa1.88□□□□□ -2.11
CSE1YGL238W TCB1Q12466 1186 aa1.88□□□□□ -2.11
CSE1YGL238W YBL086CP38177 466 aa1.88□□□□□ -2.11
CSE1YGL238W CCP1P00431 361 aa1.87□□□□□ -2.11
CSE1YGL238W MDJ1P35191 511 aa1.87□□□□□ -2.11
CSE1YGL238W NUP42P49686 430 aaKnown RBP1.87□□□□□ -2.11
CSE1YGL238W TBF1Q02457 562 aa1.87□□□□□ -2.11
CSE1YGL238W DSF2P38213 736 aa1.87□□□□□ -2.11
CSE1YGL238W SAS10Q12136 610 aaPredicted RBP1.87□□□□□ -2.11
CSE1YGL238W VAC17P25591 423 aa1.86□□□□□ -2.11
CSE1YGL238W DLD1P32891 587 aa1.86□□□□□ -2.11
CSE1YGL238W IES2P40154 320 aa1.86□□□□□ -2.11
CSE1YGL238W NRD1P53617 575 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
CSE1YGL238W YMR196WQ04336 1088 aa1.86□□□□□ -2.11
CSE1YGL238W TRM1P15565 570 aaKnown RBP1.86□□□□□ -2.11
CSE1YGL238W JJJ3P47138 172 aa1.86□□□□□ -2.11
CSE1YGL238W SCJ1P25303 377 aa1.85□□□□□ -2.11
CSE1YGL238W HST2P53686 357 aa1.85□□□□□ -2.11
CSE1YGL238W DIT2P21595 489 aa1.84□□□□□ -2.11
CSE1YGL238W EMW1P42842 904 aaKnown RBP1.84□□□□□ -2.11
CSE1YGL238W CCT8P47079 568 aaKnown RBP1.84□□□□□ -2.11
CSE1YGL238W NSG2P53898 299 aa1.84□□□□□ -2.11
CSE1YGL238W YFL066CP43538 392 aa1.84□□□□□ -2.11
CSE1YGL238W THI72Q08579 599 aa1.84□□□□□ -2.11
CSE1YGL238W APP1P53933 587 aa1.84□□□□□ -2.12
CSE1YGL238W MMP1Q12372 583 aa1.84□□□□□ -2.12
CSE1YGL238W AI1P03875 834 aa1.83□□□□□ -2.12
CSE1YGL238W NAM8Q00539 523 aaKnown RBP1.83□□□□□ -2.12
CSE1YGL238W CDC19P00549 500 aaKnown RBP1.83□□□□□ -2.12
CSE1YGL238W ITT1Q04638 464 aa1.82□□□□□ -2.12
CSE1YGL238W GLN1P32288 370 aaKnown RBP1.82□□□□□ -2.12
CSE1YGL238W RSC30P38781 883 aa1.81□□□□□ -2.12
CSE1YGL238W ESS1P22696 170 aa1.81□□□□□ -2.12
CSE1YGL238W MKS1P34072 584 aa1.81□□□□□ -2.12
CSE1YGL238W VTC4P47075 721 aa1.81□□□□□ -2.12
CSE1YGL238W CUZ1P53899 274 aa1.81□□□□□ -2.12
CSE1YGL238W DFG5Q05031 458 aa1.81□□□□□ -2.12
CSE1YGL238W SKN7P38889 622 aa1.8□□□□□ -2.12
CSE1YGL238W BDS1Q08347 646 aa1.8□□□□□ -2.12
CSE1YGL238W SBP1P10080 294 aaKnown RBP1.8□□□□□ -2.12
CSE1YGL238W YJU3P28321 313 aa1.8□□□□□ -2.12
CSE1YGL238W YPR053CQ6Q5F3 151 aa1.8□□□□□ -2.12
CSE1YGL238W STE6P12866 1290 aa1.8□□□□□ -2.12
CSE1YGL238W SPB4P25808 606 aaPredicted RBP1.8□□□□□ -2.12
CSE1YGL238W DAL1P32375 460 aa1.8□□□□□ -2.12
CSE1YGL238W CEM1P39525 442 aa1.8□□□□□ -2.12
CSE1YGL238W FIG4P42837 879 aa1.8□□□□□ -2.12
CSE1YGL238W FBP26P32604 452 aa1.79□□□□□ -2.12
CSE1YGL238W ADE12P80210 433 aaKnown RBP1.79□□□□□ -2.12
CSE1YGL238W YMR187CQ03236 431 aa1.78□□□□□ -2.12
CSE1YGL238W SYT1Q06836 1226 aa1.78□□□□□ -2.12
CSE1YGL238W ATF2P53296 535 aa1.78□□□□□ -2.12
CSE1YGL238W DIT1P21623 536 aa1.77□□□□□ -2.13
CSE1YGL238W TDA6Q06466 467 aa1.77□□□□□ -2.13
CSE1YGL238W SBE2P42223 864 aaKnown RBP1.77□□□□□ -2.13
CSE1YGL238W YMR265CQ03508 461 aaKnown RBP1.77□□□□□ -2.13
CSE1YGL238W YDR461C-AQ2V2P7 80 aa1.77□□□□□ -2.13
CSE1YGL238W MCX1P38323 520 aaPredicted RBP1.77□□□□□ -2.13
CSE1YGL238W ISU1Q03020 165 aa1.77□□□□□ -2.13
CSE1YGL238W PKH3Q03306 898 aaPredicted RBP1.77□□□□□ -2.13
CSE1YGL238W YPR084WQ06821 456 aa1.77□□□□□ -2.13
CSE1YGL238W ARG8P18544 423 aa1.76□□□□□ -2.13
CSE1YGL238W KTR1P27810 393 aaKnown RBP1.76□□□□□ -2.13
CSE1YGL238W UBP15P50101 1230 aa1.76□□□□□ -2.13
CSE1YGL238W KRE33P53914 1056 aaKnown RBP1.76□□□□□ -2.13
CSE1YGL238W TEC1P18412 486 aa1.76□□□□□ -2.13
CSE1YGL238W RPP2BP02400 110 aaKnown RBP1.75□□□□□ -2.13
CSE1YGL238W YCK2P23292 546 aaKnown RBP1.75□□□□□ -2.13
CSE1YGL238W SLA1P32790 1244 aa1.75□□□□□ -2.13
CSE1YGL238W GLT1Q12680 2145 aaKnown RBP1.75□□□□□ -2.13
CSE1YGL238W DLD3P39976 496 aaKnown RBP1.75□□□□□ -2.13
CSE1YGL238W MSN5P52918 1224 aa1.75□□□□□ -2.13
CSE1YGL238W SSN3P39073 555 aa1.74□□□□□ -2.13
CSE1YGL238W YNR014WP53719 212 aa1.74□□□□□ -2.13
CSE1YGL238W ATG20Q07528 640 aa1.74□□□□□ -2.13
CSE1YGL238W AMN1P38285 549 aaPredicted RBP1.74□□□□□ -2.13
CSE1YGL238W GPM1P00950 247 aaKnown RBP1.73□□□□□ -2.13
CSE1YGL238W GUT2P32191 649 aa1.73□□□□□ -2.13
CSE1YGL238W LSB6P42951 607 aa1.73□□□□□ -2.13
CSE1YGL238W YDR215CQ12240 137 aa1.73□□□□□ -2.13
CSE1YGL238W TY1A-DR3Q12441 440 aa1.73□□□□□ -2.13
CSE1YGL238W BOI2P39969 1040 aa1.73□□□□□ -2.13
CSE1YGL238W YNR021WP53723 404 aaKnown RBP1.73□□□□□ -2.13
CSE1YGL238W RAD59Q12223 238 aa1.73□□□□□ -2.13
CSE1YGL238W SLN1P39928 1220 aaPredicted RBP1.73□□□□□ -2.13
CSE1YGL238W APL6P46682 809 aa1.73□□□□□ -2.13
CSE1YGL238W CSN12P47130 423 aa1.73□□□□□ -2.13
CSE1YGL238W WTM2Q12206 467 aa1.73□□□□□ -2.13
CSE1YGL238W FPS1P23900 669 aa1.72□□□□□ -2.13
CSE1YGL238W GLC3P32775 704 aa1.72□□□□□ -2.13
CSE1YGL238W MET1P36150 593 aa1.72□□□□□ -2.13
CSE1YGL238W FRA1Q07825 749 aa1.72□□□□□ -2.13
CSE1YGL238W MCA1Q08601 432 aa1.72□□□□□ -2.13
CSE1YGL238W SPT2P06843 333 aaPredicted RBP1.71□□□□□ -2.14
CSE1YGL238W AHP1P38013 176 aaKnown RBP1.71□□□□□ -2.14
CSE1YGL238W STE20Q03497 939 aaKnown RBP1.71□□□□□ -2.14
CSE1YGL238W MAK16P10962 306 aaPredicted RBP1.71□□□□□ -2.14
CSE1YGL238W MAC1P35192 417 aa1.71□□□□□ -2.14
CSE1YGL238W TAT1P38085 619 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms