RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W APL6P46682 809 aa7.19□□□□□ -1.26
UBC6YER100W RPA14P50106 137 aa7.19□□□□□ -1.26
UBC6YER100W IOC4Q04213 475 aa7.19□□□□□ -1.26
UBC6YER100W ERF2Q06551 359 aa7.19□□□□□ -1.26
UBC6YER100W TEC1P18412 486 aa7.18□□□□□ -1.26
UBC6YER100W GUT2P32191 649 aa7.18□□□□□ -1.26
UBC6YER100W ISF1P32488 338 aa7.18□□□□□ -1.26
UBC6YER100W OCA5P38738 679 aa7.18□□□□□ -1.26
UBC6YER100W MID1P41821 548 aa7.18□□□□□ -1.26
UBC6YER100W ALD2P47771 506 aa7.18□□□□□ -1.26
UBC6YER100W STE20Q03497 939 aaKnown RBP7.18□□□□□ -1.26
UBC6YER100W YPR097WQ06839 1073 aa7.18□□□□□ -1.26
UBC6YER100W NMA111P53920 997 aa7.17□□□□□ -1.26
UBC6YER100W PML39Q03760 334 aa7.17□□□□□ -1.26
UBC6YER100W YDR344CQ05510 147 aa7.17□□□□□ -1.26
UBC6YER100W YPR084WQ06821 456 aa7.17□□□□□ -1.26
UBC6YER100W YDL206WQ12424 762 aa7.17□□□□□ -1.26
UBC6YER100W NPL4P33755 580 aa7.16□□□□□ -1.26
UBC6YER100W RGA1P39083 1007 aa7.16□□□□□ -1.26
UBC6YER100W POL32P47110 350 aa7.16□□□□□ -1.26
UBC6YER100W AGE1Q04412 482 aa7.16□□□□□ -1.26
UBC6YER100W GAS4Q08271 471 aa7.16□□□□□ -1.26
UBC6YER100W SRS2P12954 1174 aa7.15□□□□□ -1.26
UBC6YER100W VRP1P37370 817 aa7.15□□□□□ -1.26
UBC6YER100W GRS1P38088 690 aaKnown RBP7.15□□□□□ -1.26
UBC6YER100W FIG4P42837 879 aa7.15□□□□□ -1.26
UBC6YER100W ACF4P47129 309 aa7.15□□□□□ -1.26
UBC6YER100W ACS2P52910 683 aaKnown RBP7.15□□□□□ -1.26
UBC6YER100W ROM1P53046 1155 aa7.15□□□□□ -1.26
UBC6YER100W PNP1Q05788 311 aa7.15□□□□□ -1.26
UBC6YER100W ATE1P16639 503 aa7.14□□□□□ -1.27
UBC6YER100W TUB4P53378 473 aa7.14□□□□□ -1.27
UBC6YER100W TSC13Q99190 310 aa7.14□□□□□ -1.27
UBC6YER100W XDJ1P39102 459 aa7.13□□□□□ -1.27
UBC6YER100W PEX29Q03370 554 aa7.13□□□□□ -1.27
UBC6YER100W ALR1Q08269 859 aa7.13□□□□□ -1.27
UBC6YER100W WHI5Q12416 295 aa7.13□□□□□ -1.27
UBC6YER100W BOL3P39724 118 aa7.12□□□□□ -1.27
UBC6YER100W RAM1P22007 431 aa7.11□□□□□ -1.27
UBC6YER100W NNF1P47149 201 aa7.11□□□□□ -1.27
UBC6YER100W STR2P47164 639 aa7.11□□□□□ -1.27
UBC6YER100W ISM1P48526 1002 aa7.11□□□□□ -1.27
UBC6YER100W DOS2P54858 310 aa7.11□□□□□ -1.27
UBC6YER100W FUR4P05316 633 aaKnown RBP7.1□□□□□ -1.27
UBC6YER100W SOH1P38633 127 aa7.1□□□□□ -1.27
UBC6YER100W YJR107WP47145 328 aa7.1□□□□□ -1.27
UBC6YER100W FPR4Q06205 392 aaPredicted RBP7.1□□□□□ -1.27
UBC6YER100W STB3Q12427 513 aa7.1□□□□□ -1.27
UBC6YER100W VAN1P23642 535 aa7.09□□□□□ -1.27
UBC6YER100W MGE1P38523 228 aa7.09□□□□□ -1.27
UBC6YER100W YFL034WP43564 1073 aa7.09□□□□□ -1.27
UBC6YER100W NUT2Q06213 157 aa7.09□□□□□ -1.27
UBC6YER100W PUN1Q06991 263 aa7.09□□□□□ -1.27
UBC6YER100W TRS33Q99394 268 aa7.09□□□□□ -1.27
UBC6YER100W TY1A-DR4O74302 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-HP0C2I4 478 aaKnown RBP7.08□□□□□ -1.28
UBC6YER100W TY1A-AP0CX57 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-PR1P0CX58 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-ORP0CX59 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-PR2P0CX60 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-DR5P0CX65 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-ER2P0CX66 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-GR3P0CX67 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-LR1P0CX68 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-MR2P0CX69 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-JR2P47099 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-DR1Q03856 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-ML1Q04706 440 aaKnown RBP7.08□□□□□ -1.28
UBC6YER100W TY1A-BRQ12217 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-NL2Q12470 440 aa7.08□□□□□ -1.28
UBC6YER100W TY1A-GR2Q12485 440 aa7.08□□□□□ -1.28
UBC6YER100W LSO1Q3E827 93 aa7.08□□□□□ -1.28
UBC6YER100W DPS1P04802 557 aaKnown RBP7.07□□□□□ -1.28
UBC6YER100W PDR1P12383 1068 aa7.07□□□□□ -1.28
UBC6YER100W SEC2P17065 759 aa7.07□□□□□ -1.28
UBC6YER100W UBP1P25037 809 aa7.07□□□□□ -1.28
UBC6YER100W SEC8P32855 1065 aa7.07□□□□□ -1.28
UBC6YER100W QDR1P40475 563 aa7.07□□□□□ -1.28
UBC6YER100W PDC1P06169 563 aaKnown RBP7.06□□□□□ -1.28
UBC6YER100W TPD3P31383 635 aa7.06□□□□□ -1.28
UBC6YER100W OYE2Q03558 400 aaKnown RBP7.06□□□□□ -1.28
UBC6YER100W VAC17P25591 423 aa7.05□□□□□ -1.28
UBC6YER100W GCD11P32481 527 aaKnown RBP7.05□□□□□ -1.28
UBC6YER100W GLO3P38682 493 aaKnown RBP7.05□□□□□ -1.28
UBC6YER100W THI12P42883 340 aa7.05□□□□□ -1.28
UBC6YER100W THI5P43534 340 aa7.05□□□□□ -1.28
UBC6YER100W THI11P47183 340 aa7.05□□□□□ -1.28
UBC6YER100W KXD1P53158 218 aa7.05□□□□□ -1.28
UBC6YER100W HAP5Q02516 242 aa7.05□□□□□ -1.28
UBC6YER100W THI13Q07748 340 aa7.05□□□□□ -1.28
UBC6YER100W FRT1Q99332 602 aa7.05□□□□□ -1.28
UBC6YER100W MET4P32389 672 aa7.04□□□□□ -1.28
UBC6YER100W SPR3P41901 512 aa7.04□□□□□ -1.28
UBC6YER100W ALD4P46367 519 aaKnown RBP7.04□□□□□ -1.28
UBC6YER100W PDI1P17967 522 aaKnown RBP7.03□□□□□ -1.28
UBC6YER100W BRN1P38170 754 aa7.03□□□□□ -1.28
UBC6YER100W SRC1Q03707 834 aa7.03□□□□□ -1.28
UBC6YER100W PAC1P39946 494 aaKnown RBP7.02□□□□□ -1.29
UBC6YER100W AIM9P40053 627 aaKnown RBP7.02□□□□□ -1.29
UBC6YER100W HXT10P43581 546 aa7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms