RNA–Protein interactions for RNA: YER040W

GLN3, Transcript of Transcriptional activator of genes regulated by nitrogen catabolite repression, yeastyeast

Gene GLN3, Length 2,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GLN3YER040W SRP54P20424 541 aaKnown RBP7.56□□□□□ -1.2
GLN3YER040W DLD1P32891 587 aa7.56□□□□□ -1.2
GLN3YER040W CSE4P36012 229 aa7.56□□□□□ -1.2
GLN3YER040W VPS20Q04272 221 aa7.56□□□□□ -1.2
GLN3YER040W APC11Q12157 165 aa7.56□□□□□ -1.2
GLN3YER040W SNF2P22082 1703 aa7.56□□□□□ -1.2
GLN3YER040W SPE2P21182 396 aa7.56□□□□□ -1.2
GLN3YER040W DID4P36108 232 aa7.56□□□□□ -1.2
GLN3YER040W RTT107P38850 1070 aa7.56□□□□□ -1.2
GLN3YER040W RSM25P40496 264 aa7.56□□□□□ -1.2
GLN3YER040W GRX3Q03835 250 aa7.56□□□□□ -1.2
GLN3YER040W VPS41P38959 992 aa7.55□□□□□ -1.2
GLN3YER040W HST1P53685 503 aa7.55□□□□□ -1.2
GLN3YER040W PLP2Q12017 286 aa7.55□□□□□ -1.2
GLN3YER040W DRS2P39524 1355 aa7.54□□□□□ -1.2
GLN3YER040W SWH1P35845 1188 aa7.54□□□□□ -1.2
GLN3YER040W SSL2Q00578 843 aa7.54□□□□□ -1.2
GLN3YER040W PSK1P31374 1356 aa7.54□□□□□ -1.2
GLN3YER040W PRP31P49704 494 aaPredicted RBP7.54□□□□□ -1.2
GLN3YER040W ARP5P53946 755 aa7.54□□□□□ -1.2
GLN3YER040W HRQ1Q05549 1077 aa7.54□□□□□ -1.2
GLN3YER040W THI22Q06490 572 aa7.54□□□□□ -1.2
GLN3YER040W TLG2Q08144 397 aa7.54□□□□□ -1.2
GLN3YER040W MLP1Q02455 1875 aaKnown RBP7.54□□□□□ -1.2
GLN3YER040W MRPL10P36520 322 aa7.53□□□□□ -1.2
GLN3YER040W CWH41P53008 833 aa7.53□□□□□ -1.2
GLN3YER040W BUD3P25558 1636 aa7.53□□□□□ -1.2
GLN3YER040W RAV1P47104 1357 aa7.53□□□□□ -1.2
GLN3YER040W TAN1P53072 289 aaPredicted RBP7.53□□□□□ -1.2
GLN3YER040W VPS72Q03388 795 aa7.53□□□□□ -1.2
GLN3YER040W NOP8Q08287 484 aaPredicted RBP7.53□□□□□ -1.2
GLN3YER040W YKL068W-AQ3E826 78 aa7.53□□□□□ -1.2
GLN3YER040W FKH1P40466 484 aa7.52□□□□□ -1.21
GLN3YER040W MSH1P25846 959 aa7.52□□□□□ -1.21
GLN3YER040W SWI3P32591 825 aa7.52□□□□□ -1.21
GLN3YER040W BRN1P38170 754 aa7.52□□□□□ -1.21
GLN3YER040W YGL082WP53155 381 aa7.52□□□□□ -1.21
GLN3YER040W HEF3P53978 1044 aaKnown RBP7.52□□□□□ -1.21
GLN3YER040W DOP1Q03921 1698 aa7.51□□□□□ -1.21
GLN3YER040W KEX1P09620 729 aa7.51□□□□□ -1.21
GLN3YER040W MPE1P35728 441 aaKnown RBP7.51□□□□□ -1.21
GLN3YER040W NKP2Q06162 153 aa7.51□□□□□ -1.21
GLN3YER040W MSB4Q12317 492 aa7.51□□□□□ -1.21
GLN3YER040W KRE5P22023 1365 aa7.51□□□□□ -1.21
GLN3YER040W BIK1P11709 440 aa7.5□□□□□ -1.21
GLN3YER040W YNL035CP53962 389 aaKnown RBP7.5□□□□□ -1.21
GLN3YER040W GCR2Q01722 534 aa7.5□□□□□ -1.21
GLN3YER040W YOR093CQ12275 1648 aa7.5□□□□□ -1.21
GLN3YER040W PDR11P40550 1411 aa7.5□□□□□ -1.21
GLN3YER040W TY1B-JR2P47100 1755 aaKnown RBP7.5□□□□□ -1.21
GLN3YER040W TY1B-ER2Q03619 1755 aa7.5□□□□□ -1.21
GLN3YER040W TY1B-MR1Q04214 1755 aa7.5□□□□□ -1.21
GLN3YER040W TY1B-MR2Q04670 1755 aaKnown RBP7.5□□□□□ -1.21
GLN3YER040W TY1B-LR1Q12088 1755 aaKnown RBP7.5□□□□□ -1.21
GLN3YER040W TY1B-NL1Q12112 1755 aa7.5□□□□□ -1.21
GLN3YER040W TY1B-GR1Q12141 1755 aa7.5□□□□□ -1.21
GLN3YER040W TY1B-BLQ12490 1755 aa7.5□□□□□ -1.21
GLN3YER040W SES1P07284 462 aaKnown RBP7.5□□□□□ -1.21
GLN3YER040W SCT1P32784 759 aa7.5□□□□□ -1.21
GLN3YER040W ILV3P39522 585 aaKnown RBP7.5□□□□□ -1.21
GLN3YER040W HXT13P39924 564 aa7.5□□□□□ -1.21
GLN3YER040W PUS1Q12211 544 aaKnown RBP7.5□□□□□ -1.21
GLN3YER040W TY1B-BRQ12193 1756 aa7.5□□□□□ -1.21
GLN3YER040W TY1B-GR3Q12316 1755 aa7.5□□□□□ -1.21
GLN3YER040W TY1B-ORQ92393 1755 aa7.5□□□□□ -1.21
GLN3YER040W CDC25P04821 1589 aa7.49□□□□□ -1.21
GLN3YER040W TRP5P00931 707 aaKnown RBP7.49□□□□□ -1.21
GLN3YER040W PRD1P25375 712 aa7.49□□□□□ -1.21
GLN3YER040W RAD51P25454 400 aa7.49□□□□□ -1.21
GLN3YER040W MRC1P25588 1096 aa7.49□□□□□ -1.21
GLN3YER040W CBF5P33322 483 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
GLN3YER040W GYL1Q04322 720 aa7.49□□□□□ -1.21
GLN3YER040W RAD50P12753 1312 aa7.49□□□□□ -1.21
GLN3YER040W SPT5P27692 1063 aaKnown RBP7.48□□□□□ -1.21
GLN3YER040W RTT109Q07794 436 aa7.48□□□□□ -1.21
GLN3YER040W MAK21Q12176 1025 aaKnown RBP7.48□□□□□ -1.21
GLN3YER040W SPO14P36126 1683 aa7.47□□□□□ -1.21
GLN3YER040W RFC1P38630 861 aaKnown RBP7.47□□□□□ -1.21
GLN3YER040W YMR1P47147 688 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
GLN3YER040W HXT17P53631 564 aa7.47□□□□□ -1.21
GLN3YER040W YSP2Q06681 1438 aa7.46□□□□□ -1.22
GLN3YER040W SLD2P34252 453 aa7.46□□□□□ -1.22
GLN3YER040W HYR1P40581 163 aaKnown RBP7.46□□□□□ -1.22
GLN3YER040W BDP1P46678 594 aa7.46□□□□□ -1.22
GLN3YER040W SEC39Q12745 709 aa7.46□□□□□ -1.22
GLN3YER040W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
GLN3YER040W CTI6Q08923 506 aa7.44□□□□□ -1.22
GLN3YER040W YPL225WQ08971 146 aaKnown RBP7.44□□□□□ -1.22
GLN3YER040W GIN4Q12263 1142 aa7.44□□□□□ -1.22
GLN3YER040W RAD3P06839 778 aa7.44□□□□□ -1.22
GLN3YER040W PUP2P32379 260 aa7.44□□□□□ -1.22
GLN3YER040W MRX12P47084 519 aa7.44□□□□□ -1.22
GLN3YER040W MDM38Q08179 573 aa7.44□□□□□ -1.22
GLN3YER040W TRS33Q99394 268 aa7.44□□□□□ -1.22
GLN3YER040W RNR2P09938 399 aaKnown RBP7.43□□□□□ -1.22
GLN3YER040W HSP104P31539 908 aaKnown RBP7.43□□□□□ -1.22
GLN3YER040W YAP3P38749 330 aa7.43□□□□□ -1.22
GLN3YER040W HOT1Q03213 719 aa7.43□□□□□ -1.22
GLN3YER040W SRC1Q03707 834 aa7.43□□□□□ -1.22
GLN3YER040W PEX19Q07418 342 aa7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms