RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C TY1A-MR1Q04215 440 aa6.26□□□□□ -1.41
SMB1YER029C YPR097WQ06839 1073 aa6.26□□□□□ -1.41
SMB1YER029C DPH6Q12429 685 aa6.26□□□□□ -1.41
SMB1YER029C DSF2P38213 736 aa6.25□□□□□ -1.41
SMB1YER029C YMR196WQ04336 1088 aa6.25□□□□□ -1.41
SMB1YER029C CCP1P00431 361 aa6.24□□□□□ -1.41
SMB1YER029C PUS6P53294 404 aa6.24□□□□□ -1.41
SMB1YER029C FPK1P53739 893 aa6.24□□□□□ -1.41
SMB1YER029C NSG2P53898 299 aa6.24□□□□□ -1.41
SMB1YER029C ITT1Q04638 464 aa6.24□□□□□ -1.41
SMB1YER029C OSH7P38755 437 aa6.23□□□□□ -1.41
SMB1YER029C NUP42P49686 430 aaKnown RBP6.23□□□□□ -1.41
SMB1YER029C THI72Q08579 599 aa6.2□□□□□ -1.42
SMB1YER029C APP1P53933 587 aa6.19□□□□□ -1.42
SMB1YER029C TRM1P15565 570 aaKnown RBP6.18□□□□□ -1.42
SMB1YER029C SCJ1P25303 377 aa6.18□□□□□ -1.42
SMB1YER029C YBL086CP38177 466 aa6.18□□□□□ -1.42
SMB1YER029C DMA1P38823 416 aa6.18□□□□□ -1.42
SMB1YER029C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SMB1YER029C LYS5P50113 272 aa6.17□□□□□ -1.42
SMB1YER029C CCT8P47079 568 aaKnown RBP6.16□□□□□ -1.42
SMB1YER029C DIT2P21595 489 aa6.15□□□□□ -1.42
SMB1YER029C JJJ3P47138 172 aa6.15□□□□□ -1.42
SMB1YER029C HST2P53686 357 aa6.14□□□□□ -1.43
SMB1YER029C VAC17P25591 423 aa6.13□□□□□ -1.43
SMB1YER029C SBP1P10080 294 aaKnown RBP6.12□□□□□ -1.43
SMB1YER029C YFL066CP43538 392 aa6.12□□□□□ -1.43
SMB1YER029C NAM8Q00539 523 aaKnown RBP6.12□□□□□ -1.43
SMB1YER029C MMP1Q12372 583 aa6.11□□□□□ -1.43
SMB1YER029C AI1P03875 834 aa6.08□□□□□ -1.44
SMB1YER029C SPB4P25808 606 aaPredicted RBP6.07□□□□□ -1.44
SMB1YER029C GLN1P32288 370 aaKnown RBP6.06□□□□□ -1.44
SMB1YER029C SAS10Q12136 610 aaPredicted RBP6.06□□□□□ -1.44
SMB1YER029C EMW1P42842 904 aaKnown RBP6.05□□□□□ -1.44
SMB1YER029C ESS1P22696 170 aa6.04□□□□□ -1.44
SMB1YER029C DFG5Q05031 458 aa6.04□□□□□ -1.44
SMB1YER029C RQC2Q12532 1038 aaKnown RBP6.04□□□□□ -1.44
SMB1YER029C YPR053CQ6Q5F3 151 aa6.04□□□□□ -1.44
SMB1YER029C CDC19P00549 500 aaKnown RBP6.03□□□□□ -1.44
SMB1YER029C CUZ1P53899 274 aa6.02□□□□□ -1.45
SMB1YER029C YJU3P28321 313 aa6.01□□□□□ -1.45
SMB1YER029C SBE2P42223 864 aaKnown RBP6□□□□□ -1.45
SMB1YER029C MKS1P34072 584 aa5.99□□□□□ -1.45
SMB1YER029C GLT1Q12680 2145 aaKnown RBP5.98□□□□□ -1.45
SMB1YER029C RSC30P38781 883 aa5.98□□□□□ -1.45
SMB1YER029C ATF2P53296 535 aa5.98□□□□□ -1.45
SMB1YER029C CEM1P39525 442 aa5.97□□□□□ -1.45
SMB1YER029C TDA6Q06466 467 aa5.97□□□□□ -1.45
SMB1YER029C YMR187CQ03236 431 aa5.95□□□□□ -1.46
SMB1YER029C BDS1Q08347 646 aa5.95□□□□□ -1.46
SMB1YER029C SKN7P38889 622 aa5.94□□□□□ -1.46
SMB1YER029C FIG4P42837 879 aa5.93□□□□□ -1.46
SMB1YER029C PKH3Q03306 898 aaPredicted RBP5.93□□□□□ -1.46
SMB1YER029C ARG8P18544 423 aa5.91□□□□□ -1.46
SMB1YER029C FBP26P32604 452 aa5.91□□□□□ -1.46
SMB1YER029C VTC4P47075 721 aa5.91□□□□□ -1.46
SMB1YER029C ADE12P80210 433 aaKnown RBP5.9□□□□□ -1.46
SMB1YER029C STE6P12866 1290 aa5.88□□□□□ -1.47
SMB1YER029C TEC1P18412 486 aa5.87□□□□□ -1.47
SMB1YER029C KTR1P27810 393 aaKnown RBP5.87□□□□□ -1.47
SMB1YER029C YNR014WP53719 212 aa5.87□□□□□ -1.47
SMB1YER029C YMR265CQ03508 461 aaKnown RBP5.87□□□□□ -1.47
SMB1YER029C SYT1Q06836 1226 aa5.87□□□□□ -1.47
SMB1YER029C GLC3P32775 704 aa5.85□□□□□ -1.47
SMB1YER029C YNR021WP53723 404 aaKnown RBP5.85□□□□□ -1.47
SMB1YER029C DAL1P32375 460 aa5.84□□□□□ -1.47
SMB1YER029C KRE33P53914 1056 aaKnown RBP5.84□□□□□ -1.47
SMB1YER029C DIT1P21623 536 aa5.83□□□□□ -1.48
SMB1YER029C YCK2P23292 546 aaKnown RBP5.83□□□□□ -1.48
SMB1YER029C YPR084WQ06821 456 aa5.83□□□□□ -1.48
SMB1YER029C MCA1Q08601 432 aa5.82□□□□□ -1.48
SMB1YER029C SLN1P39928 1220 aaPredicted RBP5.81□□□□□ -1.48
SMB1YER029C DLD3P39976 496 aaKnown RBP5.81□□□□□ -1.48
SMB1YER029C ISU1Q03020 165 aa5.81□□□□□ -1.48
SMB1YER029C RPP2BP02400 110 aaKnown RBP5.8□□□□□ -1.48
SMB1YER029C AMN1P38285 549 aaPredicted RBP5.79□□□□□ -1.48
SMB1YER029C CSN12P47130 423 aa5.79□□□□□ -1.48
SMB1YER029C UBP15P50101 1230 aa5.79□□□□□ -1.48
SMB1YER029C ATG20Q07528 640 aa5.79□□□□□ -1.48
SMB1YER029C RAD59Q12223 238 aa5.79□□□□□ -1.48
SMB1YER029C GUT2P32191 649 aa5.78□□□□□ -1.48
SMB1YER029C MCX1P38323 520 aaPredicted RBP5.77□□□□□ -1.49
SMB1YER029C MAC1P35192 417 aa5.76□□□□□ -1.49
SMB1YER029C BOI2P39969 1040 aa5.76□□□□□ -1.49
SMB1YER029C YDR215CQ12240 137 aa5.76□□□□□ -1.49
SMB1YER029C YDR461C-AQ2V2P7 80 aa5.76□□□□□ -1.49
SMB1YER029C AIM7Q12156 149 aa5.75□□□□□ -1.49
SMB1YER029C LSB6P42951 607 aa5.74□□□□□ -1.49
SMB1YER029C MSN5P52918 1224 aa5.74□□□□□ -1.49
SMB1YER029C TY1A-DR3Q12441 440 aa5.74□□□□□ -1.49
SMB1YER029C GPM1P00950 247 aaKnown RBP5.71□□□□□ -1.5
SMB1YER029C MAK16P10962 306 aaPredicted RBP5.71□□□□□ -1.5
SMB1YER029C SLA1P32790 1244 aa5.71□□□□□ -1.5
SMB1YER029C SSN3P39073 555 aa5.71□□□□□ -1.5
SMB1YER029C STE20Q03497 939 aaKnown RBP5.71□□□□□ -1.5
SMB1YER029C AHP1P38013 176 aaKnown RBP5.7□□□□□ -1.5
SMB1YER029C FRA1Q07825 749 aa5.7□□□□□ -1.5
SMB1YER029C WTM2Q12206 467 aa5.7□□□□□ -1.5
SMB1YER029C TAT1P38085 619 aa5.69□□□□□ -1.5
SMB1YER029C NAF1P53919 492 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms