RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W TBF1Q02457 562 aa4.86□□□□□ -1.63
VPS52YDR484W TCB1Q12466 1186 aa4.86□□□□□ -1.63
VPS52YDR484W YDL206WQ12424 762 aa4.85□□□□□ -1.63
VPS52YDR484W OSH7P38755 437 aa4.85□□□□□ -1.63
VPS52YDR484W LYS5P50113 272 aa4.85□□□□□ -1.63
VPS52YDR484W TY1A-MR1Q04215 440 aa4.85□□□□□ -1.63
VPS52YDR484W YJR098CP47139 656 aa4.84□□□□□ -1.63
VPS52YDR484W DLD1P32891 587 aa4.84□□□□□ -1.64
VPS52YDR484W MAM3Q12296 706 aa4.83□□□□□ -1.64
VPS52YDR484W LEU3P08638 886 aa4.82□□□□□ -1.64
VPS52YDR484W NSG2P53898 299 aa4.82□□□□□ -1.64
VPS52YDR484W DSF2P38213 736 aa4.82□□□□□ -1.64
VPS52YDR484W FPK1P53739 893 aa4.82□□□□□ -1.64
VPS52YDR484W YMR196WQ04336 1088 aa4.82□□□□□ -1.64
VPS52YDR484W THI72Q08579 599 aa4.8□□□□□ -1.64
VPS52YDR484W CCP1P00431 361 aa4.8□□□□□ -1.64
VPS52YDR484W YBL086CP38177 466 aa4.8□□□□□ -1.64
VPS52YDR484W IES2P40154 320 aa4.78□□□□□ -1.64
VPS52YDR484W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
VPS52YDR484W CCT8P47079 568 aaKnown RBP4.78□□□□□ -1.64
VPS52YDR484W TRM1P15565 570 aaKnown RBP4.77□□□□□ -1.65
VPS52YDR484W JJJ3P47138 172 aa4.77□□□□□ -1.65
VPS52YDR484W SCJ1P25303 377 aa4.76□□□□□ -1.65
VPS52YDR484W AI1P03875 834 aa4.75□□□□□ -1.65
VPS52YDR484W SBP1P10080 294 aaKnown RBP4.75□□□□□ -1.65
VPS52YDR484W VAC17P25591 423 aa4.75□□□□□ -1.65
VPS52YDR484W APP1P53933 587 aa4.75□□□□□ -1.65
VPS52YDR484W LEO1P38439 464 aa4.72□□□□□ -1.65
VPS52YDR484W YFL066CP43538 392 aa4.72□□□□□ -1.65
VPS52YDR484W ITT1Q04638 464 aa4.72□□□□□ -1.65
VPS52YDR484W RPN1P38764 993 aaKnown RBP4.72□□□□□ -1.65
VPS52YDR484W NUP42P49686 430 aaKnown RBP4.72□□□□□ -1.65
VPS52YDR484W NAM8Q00539 523 aaKnown RBP4.72□□□□□ -1.65
VPS52YDR484W EMW1P42842 904 aaKnown RBP4.71□□□□□ -1.66
VPS52YDR484W YNR021WP53723 404 aaKnown RBP4.71□□□□□ -1.66
VPS52YDR484W MMP1Q12372 583 aa4.7□□□□□ -1.66
VPS52YDR484W HST2P53686 357 aa4.7□□□□□ -1.66
VPS52YDR484W CDC19P00549 500 aaKnown RBP4.69□□□□□ -1.66
VPS52YDR484W DIT2P21595 489 aa4.69□□□□□ -1.66
VPS52YDR484W DFG5Q05031 458 aa4.69□□□□□ -1.66
VPS52YDR484W YPR053CQ6Q5F3 151 aa4.69□□□□□ -1.66
VPS52YDR484W MKS1P34072 584 aa4.68□□□□□ -1.66
VPS52YDR484W CEM1P39525 442 aa4.66□□□□□ -1.66
VPS52YDR484W ATF2P53296 535 aa4.66□□□□□ -1.66
VPS52YDR484W CUZ1P53899 274 aa4.66□□□□□ -1.66
VPS52YDR484W BDS1Q08347 646 aa4.66□□□□□ -1.66
VPS52YDR484W AIM7Q12156 149 aa4.65□□□□□ -1.67
VPS52YDR484W ESS1P22696 170 aa4.64□□□□□ -1.67
VPS52YDR484W GLN1P32288 370 aaKnown RBP4.64□□□□□ -1.67
VPS52YDR484W GLC3P32775 704 aa4.64□□□□□ -1.67
VPS52YDR484W YMR187CQ03236 431 aa4.63□□□□□ -1.67
VPS52YDR484W SKN7P38889 622 aa4.62□□□□□ -1.67
VPS52YDR484W ADE12P80210 433 aaKnown RBP4.62□□□□□ -1.67
VPS52YDR484W KIN1P13185 1064 aa4.6□□□□□ -1.67
VPS52YDR484W YJU3P28321 313 aa4.6□□□□□ -1.67
VPS52YDR484W SBE2P42223 864 aaKnown RBP4.6□□□□□ -1.67
VPS52YDR484W TDA6Q06466 467 aa4.6□□□□□ -1.67
VPS52YDR484W YMR265CQ03508 461 aaKnown RBP4.6□□□□□ -1.67
VPS52YDR484W VTC4P47075 721 aa4.59□□□□□ -1.67
VPS52YDR484W DAL1P32375 460 aa4.58□□□□□ -1.68
VPS52YDR484W RSC30P38781 883 aa4.58□□□□□ -1.68
VPS52YDR484W FIG4P42837 879 aa4.58□□□□□ -1.68
VPS52YDR484W STE6P12866 1290 aa4.57□□□□□ -1.68
VPS52YDR484W FBP26P32604 452 aa4.57□□□□□ -1.68
VPS52YDR484W SYT1Q06836 1226 aa4.56□□□□□ -1.68
VPS52YDR484W DIT1P21623 536 aa4.55□□□□□ -1.68
VPS52YDR484W YNR014WP53719 212 aa4.55□□□□□ -1.68
VPS52YDR484W KRE33P53914 1056 aaKnown RBP4.54□□□□□ -1.68
VPS52YDR484W MCX1P38323 520 aaPredicted RBP4.53□□□□□ -1.68
VPS52YDR484W ARG8P18544 423 aa4.52□□□□□ -1.69
VPS52YDR484W PKH3Q03306 898 aaPredicted RBP4.52□□□□□ -1.69
VPS52YDR484W DLD3P39976 496 aaKnown RBP4.52□□□□□ -1.69
VPS52YDR484W UBP15P50101 1230 aa4.52□□□□□ -1.69
VPS52YDR484W SSA2P10592 639 aaKnown RBP4.51□□□□□ -1.69
VPS52YDR484W CSN12P47130 423 aa4.51□□□□□ -1.69
VPS52YDR484W YDR461C-AQ2V2P7 80 aa4.51□□□□□ -1.69
VPS52YDR484W TEC1P18412 486 aa4.5□□□□□ -1.69
VPS52YDR484W YCK2P23292 546 aaKnown RBP4.5□□□□□ -1.69
VPS52YDR484W GUA1P38625 525 aaKnown RBP4.5□□□□□ -1.69
VPS52YDR484W HGH1P48362 394 aaKnown RBP4.5□□□□□ -1.69
VPS52YDR484W ISU1Q03020 165 aa4.5□□□□□ -1.69
VPS52YDR484W RPP2BP02400 110 aaKnown RBP4.49□□□□□ -1.69
VPS52YDR484W AMN1P38285 549 aaPredicted RBP4.48□□□□□ -1.69
VPS52YDR484W BOI2P39969 1040 aa4.48□□□□□ -1.69
VPS52YDR484W LSB6P42951 607 aa4.48□□□□□ -1.69
VPS52YDR484W MAC1P35192 417 aa4.48□□□□□ -1.69
VPS52YDR484W HPC2Q01448 625 aa4.48□□□□□ -1.69
VPS52YDR484W SLN1P39928 1220 aaPredicted RBP4.46□□□□□ -1.69
VPS52YDR484W ATG20Q07528 640 aa4.46□□□□□ -1.69
VPS52YDR484W YDR215CQ12240 137 aa4.46□□□□□ -1.7
VPS52YDR484W KTR1P27810 393 aaKnown RBP4.45□□□□□ -1.7
VPS52YDR484W BRL1P38770 471 aa4.45□□□□□ -1.7
VPS52YDR484W YPR084WQ06821 456 aa4.45□□□□□ -1.7
VPS52YDR484W DMA2P53924 522 aa4.44□□□□□ -1.7
VPS52YDR484W MCA1Q08601 432 aa4.44□□□□□ -1.7
VPS52YDR484W GPM1P00950 247 aaKnown RBP4.44□□□□□ -1.7
VPS52YDR484W GUT2P32191 649 aa4.44□□□□□ -1.7
VPS52YDR484W SLA1P32790 1244 aa4.44□□□□□ -1.7
VPS52YDR484W TAT1P38085 619 aa4.44□□□□□ -1.7
VPS52YDR484W MSN5P52918 1224 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms