RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeastyeast

Gene TFB3, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB3YDR460W SIT4P20604 311 aa6.05□□□□□ -1.44
TFB3YDR460W GLN1P32288 370 aaKnown RBP6.05□□□□□ -1.44
TFB3YDR460W VRP1P37370 817 aa6.05□□□□□ -1.44
TFB3YDR460W TFB3Q03290 321 aa6.05□□□□□ -1.44
TFB3YDR460W SPP41P38904 1435 aa6.05□□□□□ -1.44
TFB3YDR460W PDR1P12383 1068 aa6.03□□□□□ -1.44
TFB3YDR460W BRL1P38770 471 aa6.03□□□□□ -1.44
TFB3YDR460W XDJ1P39102 459 aa6.03□□□□□ -1.44
TFB3YDR460W MMP1Q12372 583 aa6.03□□□□□ -1.44
TFB3YDR460W NUD1P32336 851 aa6.02□□□□□ -1.45
TFB3YDR460W BNI4P53858 892 aa6.02□□□□□ -1.45
TFB3YDR460W TSC11P40061 1430 aa6.01□□□□□ -1.45
TFB3YDR460W SMC4Q12267 1418 aa6.01□□□□□ -1.45
TFB3YDR460W SCJ1P25303 377 aa6.01□□□□□ -1.45
TFB3YDR460W ENP1P38333 483 aaKnown RBP6.01□□□□□ -1.45
TFB3YDR460W SPO14P36126 1683 aa6.01□□□□□ -1.45
TFB3YDR460W DOP1Q03921 1698 aa6.01□□□□□ -1.45
TFB3YDR460W VTH1P40438 1549 aa6□□□□□ -1.45
TFB3YDR460W VTH2P40890 1549 aa6□□□□□ -1.45
TFB3YDR460W QCR6P00127 147 aa6□□□□□ -1.45
TFB3YDR460W ESS1P22696 170 aa6□□□□□ -1.45
TFB3YDR460W PKC1P24583 1151 aa6□□□□□ -1.45
TFB3YDR460W SPT23P35210 1082 aa6□□□□□ -1.45
TFB3YDR460W RTF1P53064 558 aa6□□□□□ -1.45
TFB3YDR460W SNT2P53127 1403 aa5.99□□□□□ -1.45
TFB3YDR460W POL1P13382 1468 aa5.99□□□□□ -1.45
TFB3YDR460W NPL4P33755 580 aa5.99□□□□□ -1.45
TFB3YDR460W YNL115CP53925 644 aa5.99□□□□□ -1.45
TFB3YDR460W KEX2P13134 814 aa5.98□□□□□ -1.45
TFB3YDR460W RAM1P22007 431 aa5.98□□□□□ -1.45
TFB3YDR460W SLY41P22215 453 aa5.98□□□□□ -1.45
TFB3YDR460W PKH3Q03306 898 aaPredicted RBP5.98□□□□□ -1.45
TFB3YDR460W YOR1P53049 1477 aa5.97□□□□□ -1.45
TFB3YDR460W PTC2P39966 464 aaKnown RBP5.97□□□□□ -1.45
TFB3YDR460W STR2P47164 639 aa5.97□□□□□ -1.45
TFB3YDR460W ISM1P48526 1002 aa5.97□□□□□ -1.45
TFB3YDR460W RLF2Q12495 606 aa5.97□□□□□ -1.45
TFB3YDR460W YJU3P28321 313 aa5.96□□□□□ -1.46
TFB3YDR460W ERF2Q06551 359 aa5.96□□□□□ -1.46
TFB3YDR460W RAD59Q12223 238 aa5.96□□□□□ -1.46
TFB3YDR460W ULS1Q08562 1619 aa5.96□□□□□ -1.46
TFB3YDR460W TCB2P48231 1178 aa5.95□□□□□ -1.46
TFB3YDR460W DPS1P04802 557 aaKnown RBP5.94□□□□□ -1.46
TFB3YDR460W MET10P39692 1035 aa5.94□□□□□ -1.46
TFB3YDR460W YML082WQ04533 649 aaKnown RBP5.94□□□□□ -1.46
TFB3YDR460W BUD20Q08004 166 aaPredicted RBP5.94□□□□□ -1.46
TFB3YDR460W MYO4P32492 1471 aa5.94□□□□□ -1.46
TFB3YDR460W ARG8P18544 423 aa5.93□□□□□ -1.46
TFB3YDR460W GCD11P32481 527 aaKnown RBP5.93□□□□□ -1.46
TFB3YDR460W YBL036CP38197 257 aa5.93□□□□□ -1.46
TFB3YDR460W YPR015CQ12531 247 aa5.93□□□□□ -1.46
TFB3YDR460W TY1A-DR4O74302 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-HP0C2I4 478 aaKnown RBP5.92□□□□□ -1.46
TFB3YDR460W TY1A-AP0CX57 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-PR1P0CX58 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-ORP0CX59 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-PR2P0CX60 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-DR5P0CX65 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-ER2P0CX66 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-GR3P0CX67 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-LR1P0CX68 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-MR2P0CX69 440 aa5.92□□□□□ -1.46
TFB3YDR460W RSC30P38781 883 aa5.92□□□□□ -1.46
TFB3YDR460W RPS0BP46654 252 aaKnown RBP5.92□□□□□ -1.46
TFB3YDR460W YJL007CP47080 104 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-JR2P47099 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-DR1Q03856 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-ML1Q04706 440 aaKnown RBP5.92□□□□□ -1.46
TFB3YDR460W LAM6Q08001 693 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-BRQ12217 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-NL2Q12470 440 aa5.92□□□□□ -1.46
TFB3YDR460W TY1A-GR2Q12485 440 aa5.92□□□□□ -1.46
TFB3YDR460W STU1P38198 1513 aa5.91□□□□□ -1.46
TFB3YDR460W TRM1P15565 570 aaKnown RBP5.91□□□□□ -1.46
TFB3YDR460W SEC2P17065 759 aa5.91□□□□□ -1.46
TFB3YDR460W CSE4P36012 229 aa5.91□□□□□ -1.46
TFB3YDR460W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
TFB3YDR460W PUS6P53294 404 aa5.91□□□□□ -1.46
TFB3YDR460W TRM3Q07527 1436 aa5.91□□□□□ -1.46
TFB3YDR460W SNQ2P32568 1501 aaKnown RBP5.9□□□□□ -1.46
TFB3YDR460W BIM1P40013 344 aa5.9□□□□□ -1.46
TFB3YDR460W SEC3P33332 1336 aaKnown RBP5.9□□□□□ -1.47
TFB3YDR460W PRT1P06103 763 aaKnown RBP5.89□□□□□ -1.47
TFB3YDR460W RIX1P38883 763 aaPredicted RBP5.89□□□□□ -1.47
TFB3YDR460W YRB30P53107 440 aaPredicted RBP5.89□□□□□ -1.47
TFB3YDR460W PDR12Q02785 1511 aa5.89□□□□□ -1.47
TFB3YDR460W TUB4P53378 473 aa5.88□□□□□ -1.47
TFB3YDR460W TBF1Q02457 562 aa5.88□□□□□ -1.47
TFB3YDR460W AGE1Q04412 482 aa5.88□□□□□ -1.47
TFB3YDR460W PDR10P51533 1564 aa5.88□□□□□ -1.47
TFB3YDR460W BIO2P32451 375 aa5.87□□□□□ -1.47
TFB3YDR460W ATG32P40458 529 aa5.87□□□□□ -1.47
TFB3YDR460W IQG1Q12280 1495 aa5.87□□□□□ -1.47
TFB3YDR460W DNF3Q12674 1656 aa5.86□□□□□ -1.47
TFB3YDR460W ARO1P08566 1588 aaKnown RBP5.86□□□□□ -1.47
TFB3YDR460W PDR15Q04182 1529 aaKnown RBP5.86□□□□□ -1.47
TFB3YDR460W GDB1Q06625 1536 aa5.85□□□□□ -1.47
TFB3YDR460W MAK16P10962 306 aaPredicted RBP5.85□□□□□ -1.47
TFB3YDR460W PAT1P25644 796 aaKnown RBP5.84□□□□□ -1.47
TFB3YDR460W SPT5P27692 1063 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms