RNA–Protein interactions for RNA: YDR320C

SWA2, Transcript of Auxilin-like protein involved in vesicular transport, yeastyeast

Gene SWA2, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWA2YDR320C UBP2Q01476 1272 aa4.01□□□□□ -1.77
SWA2YDR320C SAS10Q12136 610 aaPredicted RBP4.01□□□□□ -1.77
SWA2YDR320C ARG82P07250 355 aa4□□□□□ -1.77
SWA2YDR320C TRM1P15565 570 aaKnown RBP4□□□□□ -1.77
SWA2YDR320C YMR196WQ04336 1088 aa4□□□□□ -1.77
SWA2YDR320C VAC17P25591 423 aa4□□□□□ -1.77
SWA2YDR320C YJR098CP47139 656 aa3.99□□□□□ -1.77
SWA2YDR320C ROG3P43602 733 aa3.99□□□□□ -1.77
SWA2YDR320C DMA1P38823 416 aa3.98□□□□□ -1.77
SWA2YDR320C TY1A-MR1Q04215 440 aa3.98□□□□□ -1.77
SWA2YDR320C PUS1Q12211 544 aaKnown RBP3.98□□□□□ -1.77
SWA2YDR320C CCP1P00431 361 aa3.97□□□□□ -1.77
SWA2YDR320C DIT2P21595 489 aa3.97□□□□□ -1.77
SWA2YDR320C PHM7Q12252 991 aa3.97□□□□□ -1.77
SWA2YDR320C OSH7P38755 437 aa3.96□□□□□ -1.78
SWA2YDR320C EMW1P42842 904 aaKnown RBP3.96□□□□□ -1.78
SWA2YDR320C JJJ3P47138 172 aa3.96□□□□□ -1.78
SWA2YDR320C LYS5P50113 272 aa3.96□□□□□ -1.78
SWA2YDR320C TCB1Q12466 1186 aa3.96□□□□□ -1.78
SWA2YDR320C LEO1P38439 464 aa3.95□□□□□ -1.78
SWA2YDR320C LSB3P43603 459 aaKnown RBP3.95□□□□□ -1.78
SWA2YDR320C SCJ1P25303 377 aa3.94□□□□□ -1.78
SWA2YDR320C MMP1Q12372 583 aa3.94□□□□□ -1.78
SWA2YDR320C DLD1P32891 587 aa3.93□□□□□ -1.78
SWA2YDR320C GLN1P32288 370 aaKnown RBP3.92□□□□□ -1.78
SWA2YDR320C RSC30P38781 883 aa3.92□□□□□ -1.78
SWA2YDR320C VTC4P47075 721 aa3.92□□□□□ -1.78
SWA2YDR320C CDC19P00549 500 aaKnown RBP3.89□□□□□ -1.79
SWA2YDR320C APP1P53933 587 aa3.89□□□□□ -1.79
SWA2YDR320C ESS1P22696 170 aa3.88□□□□□ -1.79
SWA2YDR320C MDJ1P35191 511 aa3.88□□□□□ -1.79
SWA2YDR320C YFL066CP43538 392 aa3.88□□□□□ -1.79
SWA2YDR320C NAM8Q00539 523 aaKnown RBP3.88□□□□□ -1.79
SWA2YDR320C SPB4P25808 606 aaPredicted RBP3.87□□□□□ -1.79
SWA2YDR320C NSG2P53898 299 aa3.87□□□□□ -1.79
SWA2YDR320C YJU3P28321 313 aa3.87□□□□□ -1.79
SWA2YDR320C MKS1P34072 584 aa3.87□□□□□ -1.79
SWA2YDR320C CCT8P47079 568 aaKnown RBP3.87□□□□□ -1.79
SWA2YDR320C FBP26P32604 452 aa3.86□□□□□ -1.79
SWA2YDR320C FIG4P42837 879 aa3.86□□□□□ -1.79
SWA2YDR320C STE6P12866 1290 aa3.85□□□□□ -1.79
SWA2YDR320C DFG5Q05031 458 aa3.85□□□□□ -1.79
SWA2YDR320C AI1P03875 834 aa3.85□□□□□ -1.79
SWA2YDR320C NRD1P53617 575 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SWA2YDR320C ITT1Q04638 464 aa3.84□□□□□ -1.79
SWA2YDR320C ATF2P53296 535 aa3.83□□□□□ -1.8
SWA2YDR320C CUZ1P53899 274 aa3.83□□□□□ -1.8
SWA2YDR320C YPR084WQ06821 456 aa3.83□□□□□ -1.8
SWA2YDR320C BDS1Q08347 646 aa3.83□□□□□ -1.8
SWA2YDR320C DAL1P32375 460 aa3.83□□□□□ -1.8
SWA2YDR320C YNR021WP53723 404 aaKnown RBP3.83□□□□□ -1.8
SWA2YDR320C KTR1P27810 393 aaKnown RBP3.82□□□□□ -1.8
SWA2YDR320C YPR053CQ6Q5F3 151 aa3.82□□□□□ -1.8
SWA2YDR320C TEC1P18412 486 aa3.81□□□□□ -1.8
SWA2YDR320C PKH3Q03306 898 aaPredicted RBP3.81□□□□□ -1.8
SWA2YDR320C THI72Q08579 599 aa3.81□□□□□ -1.8
SWA2YDR320C SKN7P38889 622 aa3.8□□□□□ -1.8
SWA2YDR320C CEM1P39525 442 aa3.8□□□□□ -1.8
SWA2YDR320C SYT1Q06836 1226 aa3.8□□□□□ -1.8
SWA2YDR320C YDR461C-AQ2V2P7 80 aa3.8□□□□□ -1.8
SWA2YDR320C UBP15P50101 1230 aa3.79□□□□□ -1.8
SWA2YDR320C ADE12P80210 433 aaKnown RBP3.79□□□□□ -1.8
SWA2YDR320C ISU1Q03020 165 aa3.79□□□□□ -1.8
SWA2YDR320C ARG8P18544 423 aa3.78□□□□□ -1.8
SWA2YDR320C AIM7Q12156 149 aa3.78□□□□□ -1.8
SWA2YDR320C DIT1P21623 536 aa3.78□□□□□ -1.8
SWA2YDR320C RPP2BP02400 110 aaKnown RBP3.77□□□□□ -1.81
SWA2YDR320C GLC3P32775 704 aa3.77□□□□□ -1.81
SWA2YDR320C MSN5P52918 1224 aa3.77□□□□□ -1.81
SWA2YDR320C SLA1P32790 1244 aa3.76□□□□□ -1.81
SWA2YDR320C RAD59Q12223 238 aa3.76□□□□□ -1.81
SWA2YDR320C NAF1P53919 492 aaKnown RBP3.75□□□□□ -1.81
SWA2YDR320C TDA6Q06466 467 aa3.75□□□□□ -1.81
SWA2YDR320C GUT2P32191 649 aa3.75□□□□□ -1.81
SWA2YDR320C MCX1P38323 520 aaPredicted RBP3.75□□□□□ -1.81
SWA2YDR320C ATG20Q07528 640 aa3.75□□□□□ -1.81
SWA2YDR320C FRA1Q07825 749 aa3.75□□□□□ -1.81
SWA2YDR320C MAK16P10962 306 aaPredicted RBP3.74□□□□□ -1.81
SWA2YDR320C SSN3P39073 555 aa3.74□□□□□ -1.81
SWA2YDR320C DLD3P39976 496 aaKnown RBP3.74□□□□□ -1.81
SWA2YDR320C YMR265CQ03508 461 aaKnown RBP3.74□□□□□ -1.81
SWA2YDR320C TY1A-DR3Q12441 440 aa3.74□□□□□ -1.81
SWA2YDR320C SBE2P42223 864 aaKnown RBP3.73□□□□□ -1.81
SWA2YDR320C CSN12P47130 423 aa3.73□□□□□ -1.81
SWA2YDR320C YMR187CQ03236 431 aa3.73□□□□□ -1.81
SWA2YDR320C KRE33P53914 1056 aaKnown RBP3.72□□□□□ -1.81
SWA2YDR320C SPT2P06843 333 aaPredicted RBP3.71□□□□□ -1.81
SWA2YDR320C SBP1P10080 294 aaKnown RBP3.71□□□□□ -1.81
SWA2YDR320C APL6P46682 809 aa3.71□□□□□ -1.82
SWA2YDR320C GPM1P00950 247 aaKnown RBP3.7□□□□□ -1.82
SWA2YDR320C LEU3P08638 886 aa3.7□□□□□ -1.82
SWA2YDR320C MRX12P47084 519 aa3.7□□□□□ -1.82
SWA2YDR320C WTM2Q12206 467 aa3.7□□□□□ -1.82
SWA2YDR320C YCK2P23292 546 aaKnown RBP3.7□□□□□ -1.82
SWA2YDR320C STE20Q03497 939 aaKnown RBP3.7□□□□□ -1.82
SWA2YDR320C YDR215CQ12240 137 aa3.69□□□□□ -1.82
SWA2YDR320C AHP1P38013 176 aaKnown RBP3.68□□□□□ -1.82
SWA2YDR320C SSA2P10592 639 aaKnown RBP3.68□□□□□ -1.82
SWA2YDR320C YNR014WP53719 212 aa3.68□□□□□ -1.82
SWA2YDR320C AMN1P38285 549 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms