RNA–Protein interactions for RNA: YDR295C

HDA2, Transcript of Subunit of the HDA1 histone deacetylase complex, yeast

Gene HDA2, Length 2,025 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HDA2	YDR295C	PRE3	P38624	215 aa		5.18	□□□□□ -1.58
HDA2	YDR295C	IOC4	Q04213	475 aa		5.18	□□□□□ -1.58
HDA2	YDR295C	KTR7	P40504	517 aa		5.17	□□□□□ -1.58
HDA2	YDR295C	FRA1	Q07825	749 aa		5.17	□□□□□ -1.58
HDA2	YDR295C	ALR1	Q08269	859 aa		5.17	□□□□□ -1.58
HDA2	YDR295C	APL6	P46682	809 aa		5.16	□□□□□ -1.58
HDA2	YDR295C	RPL34A	P87262	121 aa	Predicted RBP	5.16	□□□□□ -1.58
HDA2	YDR295C	HXT10	P43581	546 aa		5.15	□□□□□ -1.58
HDA2	YDR295C	ECM23	Q02710	187 aa		5.15	□□□□□ -1.58
HDA2	YDR295C	BMT6	Q12291	365 aa		5.15	□□□□□ -1.58
HDA2	YDR295C	MOD5	P07884	428 aa		5.14	□□□□□ -1.59
HDA2	YDR295C	GUT2	P32191	649 aa		5.14	□□□□□ -1.59
HDA2	YDR295C	CDC3	P32457	520 aa	Known RBP	5.14	□□□□□ -1.59
HDA2	YDR295C	STE20	Q03497	939 aa	Known RBP	5.14	□□□□□ -1.59
HDA2	YDR295C	ITT1	Q04638	464 aa		5.14	□□□□□ -1.59
HDA2	YDR295C	TPD3	P31383	635 aa		5.13	□□□□□ -1.59
HDA2	YDR295C	RRD1	P40454	393 aa	Known RBP	5.13	□□□□□ -1.59
HDA2	YDR295C	KXD1	P53158	218 aa		5.13	□□□□□ -1.59
HDA2	YDR295C	GAL2	P13181	574 aa		5.13	□□□□□ -1.59
HDA2	YDR295C	VAC17	P25591	423 aa		5.13	□□□□□ -1.59
HDA2	YDR295C	ENV9	Q08651	330 aa		5.13	□□□□□ -1.59
HDA2	YDR295C	CHL1	P22516	861 aa	Predicted RBP	5.12	□□□□□ -1.59
HDA2	YDR295C	ORC1	P54784	914 aa	Predicted RBP	5.12	□□□□□ -1.59
HDA2	YDR295C	SOH1	P38633	127 aa		5.11	□□□□□ -1.59
HDA2	YDR295C	SDH2	P21801	266 aa		5.11	□□□□□ -1.59
HDA2	YDR295C	SPT16	P32558	1035 aa	Known RBP	5.11	□□□□□ -1.59
HDA2	YDR295C	UBX7	P38349	436 aa		5.11	□□□□□ -1.59
HDA2	YDR295C	TPS3	P38426	1054 aa	Known RBP	5.11	□□□□□ -1.59
HDA2	YDR295C	SSF1	P38789	453 aa	Predicted RBP	5.11	□□□□□ -1.59
HDA2	YDR295C	MRX12	P47084	519 aa		5.11	□□□□□ -1.59
HDA2	YDR295C	PAT1	P25644	796 aa	Known RBP	5.1	□□□□□ -1.59
HDA2	YDR295C	HAL5	P38970	855 aa	Known RBP	5.1	□□□□□ -1.59
HDA2	YDR295C	HAT1	Q12341	374 aa		5.1	□□□□□ -1.59
HDA2	YDR295C	IXR1	P33417	597 aa		5.09	□□□□□ -1.6
HDA2	YDR295C	YJL171C	P46992	396 aa		5.09	□□□□□ -1.6
HDA2	YDR295C	ACS2	P52910	683 aa	Known RBP	5.09	□□□□□ -1.6
HDA2	YDR295C	UTP13	Q05946	817 aa	Known RBP	5.09	□□□□□ -1.6
HDA2	YDR295C	ROM1	P53046	1155 aa		5.08	□□□□□ -1.6
HDA2	YDR295C	GYP1	Q08484	637 aa		5.08	□□□□□ -1.6
HDA2	YDR295C	PHO87	P25360	923 aa		5.07	□□□□□ -1.6
HDA2	YDR295C	YEL077C	Q3E7X8	1277 aa		5.07	□□□□□ -1.6
HDA2	YDR295C	SEN54	Q02825	467 aa	Predicted RBP	5.07	□□□□□ -1.6
HDA2	YDR295C	SAS4	Q04003	481 aa		5.07	□□□□□ -1.6
HDA2	YDR295C	ATG3	P40344	310 aa		5.06	□□□□□ -1.6
HDA2	YDR295C	CWC15	Q03772	175 aa	Known RBP	5.06	□□□□□ -1.6
HDA2	YDR295C	ISR1	Q06098	443 aa	Known RBP	5.06	□□□□□ -1.6
HDA2	YDR295C	URN1	Q06525	465 aa	Known RBP	5.06	□□□□□ -1.6
HDA2	YDR295C	PUS5	Q06244	254 aa		5.05	□□□□□ -1.6
HDA2	YDR295C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
HDA2	YDR295C	PDI1	P17967	522 aa	Known RBP	5.04	□□□□□ -1.6
HDA2	YDR295C	CST6	P40535	587 aa		5.04	□□□□□ -1.6
HDA2	YDR295C	BDP1	P46678	594 aa		5.04	□□□□□ -1.6
HDA2	YDR295C	TSC13	Q99190	310 aa		5.04	□□□□□ -1.6
HDA2	YDR295C	HAP4	P14064	554 aa		5.04	□□□□□ -1.6
HDA2	YDR295C	MIP1	P15801	1254 aa		5.04	□□□□□ -1.6
HDA2	YDR295C	ATG20	Q07528	640 aa		5.03	□□□□□ -1.6
HDA2	YDR295C	YBL113C	Q7M4S9	792 aa		5.03	□□□□□ -1.6
HDA2	YDR295C	ERP5	P38819	212 aa		5.02	□□□□□ -1.61
HDA2	YDR295C	APP1	P53933	587 aa		5.02	□□□□□ -1.61
HDA2	YDR295C	HDA3	Q06623	655 aa		5.02	□□□□□ -1.61
HDA2	YDR295C	VRP1	P37370	817 aa		5.02	□□□□□ -1.61
HDA2	YDR295C	GAS4	Q08271	471 aa		5.02	□□□□□ -1.61
HDA2	YDR295C	TRL1	P09880	827 aa	Known RBP	5.01	□□□□□ -1.61
HDA2	YDR295C	BOL3	P39724	118 aa		5.01	□□□□□ -1.61
HDA2	YDR295C	AIM9	P40053	627 aa	Known RBP	5.01	□□□□□ -1.61
HDA2	YDR295C	EMW1	P42842	904 aa	Known RBP	5.01	□□□□□ -1.61
HDA2	YDR295C	KIP2	P28743	706 aa		5.01	□□□□□ -1.61
HDA2	YDR295C	FRK1	Q03002	865 aa	Predicted RBP	5.01	□□□□□ -1.61
HDA2	YDR295C	PUF6	Q04373	656 aa	Known RBP	5.01	□□□□□ -1.61
HDA2	YDR295C	SUV3	P32580	737 aa		5	□□□□□ -1.61
HDA2	YDR295C	SLD2	P34252	453 aa		5	□□□□□ -1.61
HDA2	YDR295C	KAR5	Q04746	504 aa		5	□□□□□ -1.61
HDA2	YDR295C	PNP1	Q05788	311 aa		5	□□□□□ -1.61
HDA2	YDR295C	MRF1	P30775	413 aa	Predicted RBP	4.99	□□□□□ -1.61
HDA2	YDR295C	IPL1	P38991	367 aa		4.99	□□□□□ -1.61
HDA2	YDR295C	SYH1	Q02875	849 aa	Known RBP	4.99	□□□□□ -1.61
HDA2	YDR295C	MDJ2	P42834	146 aa		4.98	□□□□□ -1.61
HDA2	YDR295C	PUN1	Q06991	263 aa		4.98	□□□□□ -1.61
HDA2	YDR295C	SRS2	P12954	1174 aa		4.97	□□□□□ -1.61
HDA2	YDR295C	NTH2	P35172	780 aa		4.97	□□□□□ -1.61
HDA2	YDR295C	UBP1	P25037	809 aa		4.97	□□□□□ -1.61
HDA2	YDR295C	FBP26	P32604	452 aa		4.97	□□□□□ -1.61
HDA2	YDR295C	ISU1	Q03020	165 aa		4.97	□□□□□ -1.61
HDA2	YDR295C	SWI5	P08153	709 aa		4.96	□□□□□ -1.62
HDA2	YDR295C	RPS6A	P0CX37	236 aa	Known RBP	4.96	□□□□□ -1.62
HDA2	YDR295C	RPS6B	P0CX38	236 aa	Predicted RBP	4.96	□□□□□ -1.62
HDA2	YDR295C	VAN1	P23642	535 aa		4.96	□□□□□ -1.62
HDA2	YDR295C	MRT4	P33201	236 aa	Known RBP	4.96	□□□□□ -1.62
HDA2	YDR295C	GRS1	P38088	690 aa	Known RBP	4.96	□□□□□ -1.62
HDA2	YDR295C	YFL034W	P43564	1073 aa		4.96	□□□□□ -1.62
HDA2	YDR295C	ALD4	P46367	519 aa	Known RBP	4.96	□□□□□ -1.62
HDA2	YDR295C	SPT2	P06843	333 aa	Predicted RBP	4.96	□□□□□ -1.62
HDA2	YDR295C	STM1	P39015	273 aa	Known RBP	4.96	□□□□□ -1.62
HDA2	YDR295C	ATG1	P53104	897 aa		4.96	□□□□□ -1.62
HDA2	YDR295C	RGA2	Q06407	1009 aa		4.96	□□□□□ -1.62
HDA2	YDR295C	UTR2	P32623	467 aa		4.95	□□□□□ -1.62
HDA2	YDR295C	MKS1	P34072	584 aa		4.95	□□□□□ -1.62
HDA2	YDR295C	BOI1	P38041	980 aa	Known RBP	4.95	□□□□□ -1.62
HDA2	YDR295C	YHL050C	P38721	697 aa		4.95	□□□□□ -1.62
HDA2	YDR295C	YHR219W	P38900	624 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 10 ms