RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeastyeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSS116YDR194C GTT3P39996 337 aa7.97□□□□□ -1.13
MSS116YDR194C QDR1P40475 563 aa7.97□□□□□ -1.13
MSS116YDR194C ACF4P47129 309 aa7.97□□□□□ -1.13
MSS116YDR194C ERF2Q06551 359 aa7.97□□□□□ -1.13
MSS116YDR194C SRS2P12954 1174 aa7.96□□□□□ -1.14
MSS116YDR194C KEX2P13134 814 aa7.96□□□□□ -1.14
MSS116YDR194C GLO3P38682 493 aaKnown RBP7.96□□□□□ -1.14
MSS116YDR194C MNL2Q12205 849 aa7.96□□□□□ -1.14
MSS116YDR194C FUR4P05316 633 aaKnown RBP7.95□□□□□ -1.14
MSS116YDR194C PUN1Q06991 263 aa7.95□□□□□ -1.14
MSS116YDR194C FRA1Q07825 749 aa7.95□□□□□ -1.14
MSS116YDR194C FYV10P40492 516 aa7.94□□□□□ -1.14
MSS116YDR194C VAC8P39968 578 aa7.93□□□□□ -1.14
MSS116YDR194C APL6P46682 809 aa7.93□□□□□ -1.14
MSS116YDR194C ALD3P54114 506 aa7.93□□□□□ -1.14
MSS116YDR194C TBF1Q02457 562 aa7.93□□□□□ -1.14
MSS116YDR194C ATG3P40344 310 aa7.92□□□□□ -1.14
MSS116YDR194C YPR084WQ06821 456 aa7.92□□□□□ -1.14
MSS116YDR194C GAS4Q08271 471 aa7.92□□□□□ -1.14
MSS116YDR194C STE20Q03497 939 aaKnown RBP7.91□□□□□ -1.14
MSS116YDR194C YDL206WQ12424 762 aa7.91□□□□□ -1.14
MSS116YDR194C TEC1P18412 486 aa7.91□□□□□ -1.14
MSS116YDR194C SOH1P38633 127 aa7.91□□□□□ -1.14
MSS116YDR194C IOC3P43596 787 aa7.91□□□□□ -1.14
MSS116YDR194C DPL1Q05567 589 aa7.91□□□□□ -1.14
MSS116YDR194C UTP13Q05946 817 aaKnown RBP7.91□□□□□ -1.14
MSS116YDR194C TSC13Q99190 310 aa7.91□□□□□ -1.14
MSS116YDR194C ALD6P54115 500 aaKnown RBP7.9□□□□□ -1.14
MSS116YDR194C GUT2P32191 649 aa7.9□□□□□ -1.15
MSS116YDR194C FIG4P42837 879 aa7.9□□□□□ -1.15
MSS116YDR194C YJR008WP47085 338 aa7.9□□□□□ -1.15
MSS116YDR194C CIT2P08679 460 aa7.89□□□□□ -1.15
MSS116YDR194C SRP40P32583 406 aaPredicted RBP7.89□□□□□ -1.15
MSS116YDR194C PPG1P32838 368 aa7.89□□□□□ -1.15
MSS116YDR194C PTC4P38089 393 aa7.89□□□□□ -1.15
MSS116YDR194C NUG1P40010 520 aaKnown RBP7.89□□□□□ -1.15
MSS116YDR194C RTS3P53289 263 aa7.89□□□□□ -1.15
MSS116YDR194C TUB4P53378 473 aa7.89□□□□□ -1.15
MSS116YDR194C MSB4Q12317 492 aa7.89□□□□□ -1.15
MSS116YDR194C PDI1P17967 522 aaKnown RBP7.88□□□□□ -1.15
MSS116YDR194C NUD1P32336 851 aa7.88□□□□□ -1.15
MSS116YDR194C LSO1Q3E827 93 aa7.88□□□□□ -1.15
MSS116YDR194C VPS16Q03308 798 aa7.87□□□□□ -1.15
MSS116YDR194C MPC54Q08550 464 aa7.87□□□□□ -1.15
MSS116YDR194C VAN1P23642 535 aa7.86□□□□□ -1.15
MSS116YDR194C MCM2P29469 868 aa7.86□□□□□ -1.15
MSS116YDR194C AGE1Q04412 482 aa7.86□□□□□ -1.15
MSS116YDR194C SPR28Q04921 423 aa7.86□□□□□ -1.15
MSS116YDR194C GPI13Q07830 1017 aa7.86□□□□□ -1.15
MSS116YDR194C MIP1P15801 1254 aa7.86□□□□□ -1.15
MSS116YDR194C YKL091CP33324 310 aaKnown RBP7.86□□□□□ -1.15
MSS116YDR194C ALG12P53730 551 aa7.86□□□□□ -1.15
MSS116YDR194C PIN2Q12057 282 aa7.86□□□□□ -1.15
MSS116YDR194C SUV3P32580 737 aa7.85□□□□□ -1.15
MSS116YDR194C RRP14P36080 434 aaKnown RBP7.85□□□□□ -1.15
MSS116YDR194C FPR3P38911 411 aaKnown RBP7.85□□□□□ -1.15
MSS116YDR194C RPA14P50106 137 aa7.85□□□□□ -1.15
MSS116YDR194C ISU2Q12056 156 aa7.85□□□□□ -1.15
MSS116YDR194C BOI1P38041 980 aaKnown RBP7.84□□□□□ -1.15
MSS116YDR194C UBX5Q06682 500 aa7.84□□□□□ -1.15
MSS116YDR194C TRS33Q99394 268 aa7.84□□□□□ -1.15
MSS116YDR194C MID1P41821 548 aa7.84□□□□□ -1.15
MSS116YDR194C TRS120Q04183 1289 aa7.84□□□□□ -1.15
MSS116YDR194C PHO4P07270 312 aaKnown RBP7.83□□□□□ -1.16
MSS116YDR194C MAD1P40957 749 aa7.83□□□□□ -1.16
MSS116YDR194C YPR097WQ06839 1073 aa7.83□□□□□ -1.16
MSS116YDR194C SSF2Q12153 453 aaPredicted RBP7.83□□□□□ -1.16
MSS116YDR194C RPT1P33299 467 aaKnown RBP7.82□□□□□ -1.16
MSS116YDR194C NSE3Q05541 303 aa7.82□□□□□ -1.16
MSS116YDR194C OSW7P43611 510 aa7.82□□□□□ -1.16
MSS116YDR194C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
MSS116YDR194C RPN4Q03465 531 aa7.81□□□□□ -1.16
MSS116YDR194C TOM20P35180 183 aa7.8□□□□□ -1.16
MSS116YDR194C HAL5P38970 855 aaKnown RBP7.8□□□□□ -1.16
MSS116YDR194C SPR3P41901 512 aa7.8□□□□□ -1.16
MSS116YDR194C DAK2P43550 591 aa7.8□□□□□ -1.16
MSS116YDR194C YJL049WP47048 450 aa7.8□□□□□ -1.16
MSS116YDR194C RMD1Q03441 430 aa7.8□□□□□ -1.16
MSS116YDR194C TSR4P25040 408 aa7.79□□□□□ -1.16
MSS116YDR194C SWE1P32944 819 aa7.79□□□□□ -1.16
MSS116YDR194C BUD6P41697 788 aa7.79□□□□□ -1.16
MSS116YDR194C ALR1Q08269 859 aa7.79□□□□□ -1.16
MSS116YDR194C TRP5P00931 707 aaKnown RBP7.78□□□□□ -1.16
MSS116YDR194C CLN2P20438 545 aa7.78□□□□□ -1.16
MSS116YDR194C BUD31P25337 157 aaPredicted RBP7.78□□□□□ -1.16
MSS116YDR194C AIM9P40053 627 aaKnown RBP7.78□□□□□ -1.16
MSS116YDR194C STR2P47164 639 aa7.78□□□□□ -1.16
MSS116YDR194C ISM1P48526 1002 aa7.78□□□□□ -1.16
MSS116YDR194C JIP4Q03361 876 aa7.78□□□□□ -1.16
MSS116YDR194C WRS1Q12109 432 aaKnown RBP7.78□□□□□ -1.16
MSS116YDR194C SPT2P06843 333 aaPredicted RBP7.77□□□□□ -1.17
MSS116YDR194C UBP1P25037 809 aa7.77□□□□□ -1.17
MSS116YDR194C NPL4P33755 580 aa7.77□□□□□ -1.17
MSS116YDR194C TFG1P41895 735 aaPredicted RBP7.77□□□□□ -1.17
MSS116YDR194C NMA111P53920 997 aa7.77□□□□□ -1.17
MSS116YDR194C UBP3Q01477 912 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17 RIP-Chip
MSS116YDR194C STI1P15705 589 aaKnown RBP RIP-Chip data7.77□□□□□ -1.17not detected
MSS116YDR194C RAM1P22007 431 aa7.77□□□□□ -1.17
MSS116YDR194C YFL034WP43564 1073 aa7.77□□□□□ -1.17
MSS116YDR194C PDR1P12383 1068 aa7.76□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms