RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W ITT1Q04638 464 aa7.01□□□□□ -1.29
HSP42YDR171W RAS1P01119 309 aa7□□□□□ -1.29
HSP42YDR171W AMS1P22855 1083 aa7□□□□□ -1.29
HSP42YDR171W RIM21P48565 533 aa7□□□□□ -1.29
HSP42YDR171W ENO1P00924 437 aaKnown RBP6.99□□□□□ -1.29
HSP42YDR171W VAC17P25591 423 aa6.99□□□□□ -1.29
HSP42YDR171W EMP47P43555 445 aa6.99□□□□□ -1.29
HSP42YDR171W KIP2P28743 706 aa6.98□□□□□ -1.29
HSP42YDR171W YPR084WQ06821 456 aa6.98□□□□□ -1.29
HSP42YDR171W GUT2P32191 649 aa6.97□□□□□ -1.29
HSP42YDR171W IXR1P33417 597 aa6.96□□□□□ -1.3
HSP42YDR171W YPP1P46951 817 aa6.96□□□□□ -1.3
HSP42YDR171W STE20Q03497 939 aaKnown RBP6.96□□□□□ -1.3
HSP42YDR171W DPS1P04802 557 aaKnown RBP6.95□□□□□ -1.3
HSP42YDR171W CPS1P27614 576 aa6.95□□□□□ -1.3
HSP42YDR171W CLA4P48562 842 aa6.95□□□□□ -1.3
HSP42YDR171W SYH1Q02875 849 aaKnown RBP6.95□□□□□ -1.3
HSP42YDR171W MRX10Q05648 414 aa6.95□□□□□ -1.3
HSP42YDR171W FRA1Q07825 749 aa6.95□□□□□ -1.3
HSP42YDR171W RDS2P19541 446 aaKnown RBP6.93□□□□□ -1.3
HSP42YDR171W TTI1P36097 1038 aa6.92□□□□□ -1.3
HSP42YDR171W APP1P53933 587 aa6.92□□□□□ -1.3
HSP42YDR171W ENV9Q08651 330 aa6.91□□□□□ -1.3
HSP42YDR171W AIR1P40507 360 aaKnown RBP6.89□□□□□ -1.31
HSP42YDR171W SOH1P38633 127 aa6.88□□□□□ -1.31
HSP42YDR171W KTR7P40504 517 aa6.88□□□□□ -1.31
HSP42YDR171W MRX12P47084 519 aa6.88□□□□□ -1.31
HSP42YDR171W HED1Q03937 162 aa6.88□□□□□ -1.31
HSP42YDR171W SSA4P22202 642 aaKnown RBP6.87□□□□□ -1.31
HSP42YDR171W APL6P46682 809 aa6.86□□□□□ -1.31
HSP42YDR171W SUB2Q07478 446 aaKnown RBP6.86□□□□□ -1.31
HSP42YDR171W PEP12P32854 288 aa6.85□□□□□ -1.31
HSP42YDR171W ATG3P40344 310 aa6.85□□□□□ -1.31
HSP42YDR171W EMW1P42842 904 aaKnown RBP6.85□□□□□ -1.31
HSP42YDR171W ISR1Q06098 443 aaKnown RBP6.85□□□□□ -1.31
HSP42YDR171W ATG20Q07528 640 aa6.85□□□□□ -1.31
HSP42YDR171W MET32Q12041 191 aa6.85□□□□□ -1.31
HSP42YDR171W SIS2P36024 562 aa6.84□□□□□ -1.31
HSP42YDR171W TGL4P36165 910 aa6.83□□□□□ -1.32
HSP42YDR171W HAL5P38970 855 aaKnown RBP6.83□□□□□ -1.32
HSP42YDR171W MRT4P33201 236 aaKnown RBP6.82□□□□□ -1.32
HSP42YDR171W CDC4P07834 779 aa6.81□□□□□ -1.32
HSP42YDR171W PUP1P25043 261 aa6.81□□□□□ -1.32
HSP42YDR171W MKS1P34072 584 aa6.81□□□□□ -1.32
HSP42YDR171W UTP13Q05946 817 aaKnown RBP6.81□□□□□ -1.32
HSP42YDR171W NOB1Q08444 459 aaKnown RBP6.81□□□□□ -1.32
HSP42YDR171W MIP1P15801 1254 aa6.8□□□□□ -1.32
HSP42YDR171W ECM23Q02710 187 aa6.8□□□□□ -1.32
HSP42YDR171W YML083CQ04526 418 aa6.8□□□□□ -1.32
HSP42YDR171W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
HSP42YDR171W FBP26P32604 452 aa6.78□□□□□ -1.32
HSP42YDR171W ASH1P34233 588 aa6.78□□□□□ -1.32
HSP42YDR171W YBL086CP38177 466 aa6.78□□□□□ -1.32
HSP42YDR171W DFG5Q05031 458 aa6.78□□□□□ -1.32
HSP42YDR171W ISU1Q03020 165 aa6.77□□□□□ -1.33
HSP42YDR171W SSA1P10591 642 aaKnown RBP6.76□□□□□ -1.33
HSP42YDR171W GAL2P13181 574 aa6.76□□□□□ -1.33
HSP42YDR171W PDI1P17967 522 aaKnown RBP6.76□□□□□ -1.33
HSP42YDR171W HST3P53687 447 aa6.76□□□□□ -1.33
HSP42YDR171W HDA3Q06623 655 aa6.76□□□□□ -1.33
HSP42YDR171W AFT1P22149 690 aa6.75□□□□□ -1.33
HSP42YDR171W UGA3P26370 528 aa6.75□□□□□ -1.33
HSP42YDR171W SRC1Q03707 834 aa6.75□□□□□ -1.33
HSP42YDR171W PHO87P25360 923 aa6.74□□□□□ -1.33
HSP42YDR171W UTR2P32623 467 aa6.74□□□□□ -1.33
HSP42YDR171W UBX7P38349 436 aa6.74□□□□□ -1.33
HSP42YDR171W AIM9P40053 627 aaKnown RBP6.74□□□□□ -1.33
HSP42YDR171W ACS2P52910 683 aaKnown RBP6.74□□□□□ -1.33
HSP42YDR171W TRK1P12685 1235 aa6.73□□□□□ -1.33
HSP42YDR171W DAT1P13483 248 aaKnown RBP6.73□□□□□ -1.33
HSP42YDR171W BDS1Q08347 646 aa6.73□□□□□ -1.33
HSP42YDR171W STE6P12866 1290 aa6.72□□□□□ -1.33
HSP42YDR171W MSB3P48566 633 aaPredicted RBP6.72□□□□□ -1.33
HSP42YDR171W TSC13Q99190 310 aa6.72□□□□□ -1.33
HSP42YDR171W SPT2P06843 333 aaPredicted RBP6.7□□□□□ -1.34
HSP42YDR171W HAP4P14064 554 aa6.7□□□□□ -1.34
HSP42YDR171W GEF1P37020 779 aa6.7□□□□□ -1.34
HSP42YDR171W ROM1P53046 1155 aa6.7□□□□□ -1.34
HSP42YDR171W RPL34AP87262 121 aaPredicted RBP6.7□□□□□ -1.34
HSP42YDR171W WTM2Q12206 467 aa6.7□□□□□ -1.34
HSP42YDR171W NTH2P35172 780 aa6.69□□□□□ -1.34
HSP42YDR171W YFL034WP43564 1073 aa6.69□□□□□ -1.34
HSP42YDR171W YJR115WP47152 169 aa6.69□□□□□ -1.34
HSP42YDR171W TBS1P38114 1094 aa6.68□□□□□ -1.34
HSP42YDR171W SLX8P40072 274 aa6.68□□□□□ -1.34
HSP42YDR171W SWI5P08153 709 aa6.67□□□□□ -1.34
HSP42YDR171W RPS6AP0CX37 236 aaKnown RBP6.67□□□□□ -1.34
HSP42YDR171W RPS6BP0CX38 236 aaPredicted RBP6.67□□□□□ -1.34
HSP42YDR171W UTP7P40055 554 aaKnown RBP6.67□□□□□ -1.34
HSP42YDR171W RTT106P40161 455 aa6.67□□□□□ -1.34
HSP42YDR171W PTK2P47116 818 aaKnown RBP6.67□□□□□ -1.34
HSP42YDR171W GAS4Q08271 471 aa6.67□□□□□ -1.34
HSP42YDR171W SRF1Q12516 437 aa6.67□□□□□ -1.34
HSP42YDR171W RPP2BP02400 110 aaKnown RBP6.66□□□□□ -1.34
HSP42YDR171W DLD3P39976 496 aaKnown RBP6.66□□□□□ -1.34
HSP42YDR171W AAD14P42884 376 aa6.66□□□□□ -1.34
HSP42YDR171W ARG82P07250 355 aa6.65□□□□□ -1.34
HSP42YDR171W CYT1P07143 309 aa6.64□□□□□ -1.35
HSP42YDR171W DLD1P32891 587 aa6.64□□□□□ -1.35
HSP42YDR171W BRE2P43132 505 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms