RNA–Protein interactions for RNA: YDR170C

SEC7, Transcript of Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors, yeast

Gene SEC7, Length 6,030 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC7	YDR170C	NUP133	P36161	1157 aa		3.16	□□□□□ -1.9
SEC7	YDR170C	RRM3	P38766	723 aa		3.16	□□□□□ -1.9
SEC7	YDR170C	APT1	P49435	187 aa	Known RBP	3.16	□□□□□ -1.9
SEC7	YDR170C	YGR130C	P53278	816 aa		3.16	□□□□□ -1.9
SEC7	YDR170C	YLH47	Q06493	454 aa		3.16	□□□□□ -1.9
SEC7	YDR170C	TEA1	P47988	759 aa		3.16	□□□□□ -1.9
SEC7	YDR170C	SNU71	P53207	620 aa	Known RBP	3.16	□□□□□ -1.9
SEC7	YDR170C	OMS1	Q06668	471 aa		3.16	□□□□□ -1.9
SEC7	YDR170C	RIM101	P33400	625 aa		3.15	□□□□□ -1.9
SEC7	YDR170C	AIM9	P40053	627 aa	Known RBP	3.15	□□□□□ -1.9
SEC7	YDR170C	SEC9	P40357	651 aa		3.15	□□□□□ -1.9
SEC7	YDR170C	NNF2	P53253	936 aa		3.15	□□□□□ -1.91
SEC7	YDR170C	ESF2	P53743	316 aa	Known RBP	3.15	□□□□□ -1.91
SEC7	YDR170C	VPS9	P54787	451 aa		3.15	□□□□□ -1.91
SEC7	YDR170C	PSE1	P32337	1089 aa	Known RBP	3.15	□□□□□ -1.91
SEC7	YDR170C	OLA1	P38219	394 aa	Known RBP	3.15	□□□□□ -1.91
SEC7	YDR170C	REV3	P14284	1504 aa		3.15	□□□□□ -1.91
SEC7	YDR170C	PUS1	Q12211	544 aa	Known RBP	3.15	□□□□□ -1.91
SEC7	YDR170C	CDC37	P06101	506 aa	Known RBP	3.14	□□□□□ -1.91
SEC7	YDR170C	MRPL10	P36520	322 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	BRN1	P38170	754 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	OPY1	P38271	328 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	SEN54	Q02825	467 aa	Predicted RBP	3.14	□□□□□ -1.91
SEC7	YDR170C	OPY2	Q06810	360 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	RTT109	Q07794	436 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	TY4A-H	Q6Q5P6	413 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	HSL1	P34244	1518 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	IQG1	Q12280	1495 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	GYP7	P48365	746 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	SWH1	P35845	1188 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	JNM1	P36224	373 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	CSI1	Q04368	295 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	SDH5	Q08230	162 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	RAD1	P06777	1100 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	SPO19	Q03029	223 aa		3.14	□□□□□ -1.91
SEC7	YDR170C	BMS1	Q08965	1183 aa	Known RBP	3.14	□□□□□ -1.91
SEC7	YDR170C	SNU66	Q12420	587 aa	Predicted RBP	3.14	□□□□□ -1.91
SEC7	YDR170C	LEU2	P04173	364 aa	Predicted RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	RAD4	P14736	754 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	RPN12	P32496	274 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	CBF2	P32504	956 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	HXT13	P39924	564 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	RRP6	Q12149	733 aa	Known RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	SUP35	P05453	685 aa	Known RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	PRD1	P25375	712 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	SEC26	P41810	973 aa	Known RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	YGR122W	P53272	402 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	NSE3	Q05541	303 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	PGA3	Q12746	312 aa	Known RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	UFD4	P33202	1483 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	MRD1	Q06106	887 aa	Known RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
SEC7	YDR170C	CIC1	P38779	376 aa	Known RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	DAS1	P47005	663 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	YKE2	P52553	114 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	NAF1	P53919	492 aa	Known RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	CSR1	Q06705	408 aa	Known RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	PEX19	Q07418	342 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	MMS1	Q06211	1407 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	LOS1	P33418	1100 aa	Predicted RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	SQT1	P35184	431 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	HOP2	P53187	214 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	EIS1	Q05050	843 aa	Known RBP	3.13	□□□□□ -1.91
SEC7	YDR170C	YLR287C	Q05881	355 aa		3.13	□□□□□ -1.91
SEC7	YDR170C	YIL092W	P40497	633 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	CTF18	P49956	741 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	CWH41	P53008	833 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	TOA1	P32773	286 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	CCT5	P40413	562 aa	Known RBP	3.12	□□□□□ -1.91
SEC7	YDR170C	CTH1	P47976	325 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	YNL144C	P53907	740 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	VPS72	Q03388	795 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	AOS1	Q06624	347 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	YCG1	Q06680	1035 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	IMH1	Q06704	911 aa	Known RBP	3.12	□□□□□ -1.91
SEC7	YDR170C	NUP157	P40064	1391 aa	Known RBP	3.12	□□□□□ -1.91
SEC7	YDR170C	NIP100	P33420	868 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	PRX1	P34227	261 aa	Known RBP	3.12	□□□□□ -1.91
SEC7	YDR170C	TTI1	P36097	1038 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	RPG1	P38249	964 aa	Known RBP	3.12	□□□□□ -1.91
SEC7	YDR170C	RFC5	P38251	354 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	EPL1	P43572	832 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	NOG1	Q02892	647 aa	Known RBP	3.12	□□□□□ -1.91
SEC7	YDR170C	SMD2	Q06217	110 aa	Known RBP	3.12	□□□□□ -1.91
SEC7	YDR170C	BNR1	P40450	1375 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	HXK1	P04806	485 aa	Known RBP	3.12	□□□□□ -1.91
SEC7	YDR170C	HEM3	P28789	327 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	HXT17	P53631	564 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	ZRT2	Q12436	422 aa		3.12	□□□□□ -1.91
SEC7	YDR170C	HIR3	P47171	1648 aa		3.11	□□□□□ -1.91
SEC7	YDR170C	HOS4	P40480	1083 aa		3.11	□□□□□ -1.91
SEC7	YDR170C	LCB5	Q06147	687 aa	Known RBP	3.11	□□□□□ -1.91
SEC7	YDR170C	RUP1	Q12242	671 aa		3.11	□□□□□ -1.91
SEC7	YDR170C	CDC11	P32458	415 aa		3.11	□□□□□ -1.91
SEC7	YDR170C	XRS2	P33301	854 aa		3.11	□□□□□ -1.91
SEC7	YDR170C	YER130C	P39959	443 aa		3.11	□□□□□ -1.91
SEC7	YDR170C	ENV11	P53246	860 aa		3.11	□□□□□ -1.91
SEC7	YDR170C	JJJ1	P53863	590 aa		3.11	□□□□□ -1.91
SEC7	YDR170C	SMC6	Q12749	1114 aa		3.11	□□□□□ -1.91
SEC7	YDR170C	NOT3	P06102	836 aa	Known RBP	3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms