RNA–Protein interactions for RNA: YDL127W

PCL2, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeastyeast

Gene PCL2, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCL2YDL127W PUS5Q06244 254 aa8.17□□□□□ -1.1
PCL2YDL127W ATG32P40458 529 aa8.16□□□□□ -1.1
PCL2YDL127W YDJ1P25491 409 aaKnown RBP8.15□□□□□ -1.1
PCL2YDL127W MRX12P47084 519 aa8.15□□□□□ -1.1
PCL2YDL127W RLF2Q12495 606 aa8.15□□□□□ -1.1
PCL2YDL127W TIF1P10081 395 aaKnown RBP8.14□□□□□ -1.11
PCL2YDL127W STE20Q03497 939 aaKnown RBP8.14□□□□□ -1.11
PCL2YDL127W MCM16Q12262 181 aa8.13□□□□□ -1.11
PCL2YDL127W FRA1Q07825 749 aa8.12□□□□□ -1.11
PCL2YDL127W RTG2P32608 588 aaKnown RBP8.11□□□□□ -1.11
PCL2YDL127W CDC4P07834 779 aa8.1□□□□□ -1.11
PCL2YDL127W YPR084WQ06821 456 aa8.1□□□□□ -1.11
PCL2YDL127W ENO2P00925 437 aaKnown RBP8.09□□□□□ -1.11
PCL2YDL127W ATG3P40344 310 aa8.09□□□□□ -1.11
PCL2YDL127W RTT106P40161 455 aa8.08□□□□□ -1.12
PCL2YDL127W EMP47P43555 445 aa8.08□□□□□ -1.12
PCL2YDL127W RIM21P48565 533 aa8.07□□□□□ -1.12
PCL2YDL127W MRT4P33201 236 aaKnown RBP8.06□□□□□ -1.12
PCL2YDL127W CLA4P48562 842 aa8.06□□□□□ -1.12
PCL2YDL127W TRK1P12685 1235 aa8.05□□□□□ -1.12
PCL2YDL127W SIS2P36024 562 aa8.05□□□□□ -1.12
PCL2YDL127W EMW1P42842 904 aaKnown RBP8.05□□□□□ -1.12
PCL2YDL127W ISF1P32488 338 aa8.04□□□□□ -1.12
PCL2YDL127W AIR1P40507 360 aaKnown RBP8.04□□□□□ -1.12
PCL2YDL127W HST3P53687 447 aa8.04□□□□□ -1.12
PCL2YDL127W YPR204WQ08995 1032 aa8.04□□□□□ -1.12
PCL2YDL127W UTP13Q05946 817 aaKnown RBP8.03□□□□□ -1.12
PCL2YDL127W ENV9Q08651 330 aa8.03□□□□□ -1.12
PCL2YDL127W MET32Q12041 191 aa8.03□□□□□ -1.12
PCL2YDL127W MRX10Q05648 414 aa8.02□□□□□ -1.13
PCL2YDL127W ENO1P00924 437 aaKnown RBP8.01□□□□□ -1.13
PCL2YDL127W AFT1P22149 690 aa8.01□□□□□ -1.13
PCL2YDL127W APP1P53933 587 aa8.01□□□□□ -1.13
PCL2YDL127W ASH1P34233 588 aa8□□□□□ -1.13
PCL2YDL127W APL6P46682 809 aa8□□□□□ -1.13
PCL2YDL127W ATG20Q07528 640 aa8□□□□□ -1.13
PCL2YDL127W UGA3P26370 528 aa7.99□□□□□ -1.13
PCL2YDL127W MSB3P48566 633 aaPredicted RBP7.99□□□□□ -1.13
PCL2YDL127W YBL086CP38177 466 aa7.98□□□□□ -1.13
PCL2YDL127W ITT1Q04638 464 aa7.98□□□□□ -1.13
PCL2YDL127W RPP2BP02400 110 aaKnown RBP7.97□□□□□ -1.13
PCL2YDL127W MKS1P34072 584 aa7.97□□□□□ -1.13
PCL2YDL127W GCR2Q01722 534 aa7.97□□□□□ -1.13
PCL2YDL127W SRC1Q03707 834 aa7.97□□□□□ -1.13
PCL2YDL127W FBP26P32604 452 aa7.96□□□□□ -1.14
PCL2YDL127W SOH1P38633 127 aa7.95□□□□□ -1.14
PCL2YDL127W ISR1Q06098 443 aaKnown RBP7.95□□□□□ -1.14
PCL2YDL127W RDS2P19541 446 aaKnown RBP7.94□□□□□ -1.14
PCL2YDL127W SSA4P22202 642 aaKnown RBP7.93□□□□□ -1.14
PCL2YDL127W TTI1P36097 1038 aa7.93□□□□□ -1.14
PCL2YDL127W ISU1Q03020 165 aa7.93□□□□□ -1.14
PCL2YDL127W BDS1Q08347 646 aa7.93□□□□□ -1.14
PCL2YDL127W PEP12P32854 288 aa7.92□□□□□ -1.14
PCL2YDL127W BRE2P43132 505 aa7.92□□□□□ -1.14
PCL2YDL127W SRF1Q12516 437 aa7.92□□□□□ -1.14
PCL2YDL127W ARG82P07250 355 aa7.9□□□□□ -1.14
PCL2YDL127W STE6P12866 1290 aa7.9□□□□□ -1.14
PCL2YDL127W DFG5Q05031 458 aa7.9□□□□□ -1.14
PCL2YDL127W YFL034WP43564 1073 aa7.89□□□□□ -1.15
PCL2YDL127W YJR115WP47152 169 aa7.88□□□□□ -1.15
PCL2YDL127W SPT2P06843 333 aaPredicted RBP7.87□□□□□ -1.15
PCL2YDL127W CPS1P27614 576 aa7.87□□□□□ -1.15
PCL2YDL127W UTR2P32623 467 aa7.87□□□□□ -1.15
PCL2YDL127W TBS1P38114 1094 aa7.87□□□□□ -1.15
PCL2YDL127W PTK2P47116 818 aaKnown RBP7.87□□□□□ -1.15
PCL2YDL127W HAL5P38970 855 aaKnown RBP7.86□□□□□ -1.15
PCL2YDL127W HDA3Q06623 655 aa7.86□□□□□ -1.15
PCL2YDL127W TGL4P36165 910 aa7.85□□□□□ -1.15
PCL2YDL127W DLD3P39976 496 aaKnown RBP7.85□□□□□ -1.15
PCL2YDL127W AAD14P42884 376 aa7.85□□□□□ -1.15
PCL2YDL127W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
PCL2YDL127W TSC13Q99190 310 aa7.85□□□□□ -1.15
PCL2YDL127W DAT1P13483 248 aaKnown RBP7.84□□□□□ -1.15
PCL2YDL127W HAP4P14064 554 aa7.84□□□□□ -1.15
PCL2YDL127W MIP1P15801 1254 aa7.84□□□□□ -1.15
PCL2YDL127W KTR7P40504 517 aa7.84□□□□□ -1.15
PCL2YDL127W PHO87P25360 923 aa7.83□□□□□ -1.16
PCL2YDL127W AIM9P40053 627 aaKnown RBP7.83□□□□□ -1.16
PCL2YDL127W NUP85P46673 744 aa7.83□□□□□ -1.16
PCL2YDL127W GAL2P13181 574 aa7.82□□□□□ -1.16
PCL2YDL127W YLR346CQ06139 101 aa7.81□□□□□ -1.16
PCL2YDL127W SUB2Q07478 446 aaKnown RBP7.81□□□□□ -1.16
PCL2YDL127W WTM2Q12206 467 aa7.81□□□□□ -1.16
PCL2YDL127W PDI1P17967 522 aaKnown RBP7.79□□□□□ -1.16
PCL2YDL127W SLX8P40072 274 aa7.79□□□□□ -1.16
PCL2YDL127W LSC2P53312 427 aa7.79□□□□□ -1.16
PCL2YDL127W GAS4Q08271 471 aa7.79□□□□□ -1.16
PCL2YDL127W PUP1P25043 261 aa7.78□□□□□ -1.16
PCL2YDL127W ECM23Q02710 187 aa7.78□□□□□ -1.16
PCL2YDL127W ACS2P52910 683 aaKnown RBP7.77□□□□□ -1.17
PCL2YDL127W SWI5P08153 709 aa7.75□□□□□ -1.17
PCL2YDL127W RPS6AP0CX37 236 aaKnown RBP7.75□□□□□ -1.17
PCL2YDL127W RPS6BP0CX38 236 aaPredicted RBP7.75□□□□□ -1.17
PCL2YDL127W NTH2P35172 780 aa7.75□□□□□ -1.17
PCL2YDL127W SSA1P10591 642 aaKnown RBP7.74□□□□□ -1.17
PCL2YDL127W UBP2Q01476 1272 aa7.74□□□□□ -1.17
PCL2YDL127W NOB1Q08444 459 aaKnown RBP7.74□□□□□ -1.17
PCL2YDL127W DLD1P32891 587 aa7.73□□□□□ -1.17
PCL2YDL127W UBX7P38349 436 aa7.73□□□□□ -1.17
PCL2YDL127W SUM1P46676 1062 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms