RNA–Protein interactions for RNA: YCL043C

PDI1, Transcript of Protein disulfide isomerase, yeast

Gene PDI1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDI1	YCL043C	THI22	Q06490	572 aa		6.31	□□□□□ -1.4
PDI1	YCL043C	YRF1-2	P40105	1681 aa		6.31	□□□□□ -1.4
PDI1	YCL043C	RRP5	Q05022	1729 aa	Known RBP	6.31	□□□□□ -1.4
PDI1	YCL043C	ROX1	P25042	368 aa		6.3	□□□□□ -1.4
PDI1	YCL043C	MSB3	P48566	633 aa	Predicted RBP	6.3	□□□□□ -1.4
PDI1	YCL043C	SLM3	Q12093	417 aa		6.3	□□□□□ -1.4
PDI1	YCL043C	OXP1	P28273	1286 aa		6.29	□□□□□ -1.4
PDI1	YCL043C	TPD3	P31383	635 aa		6.29	□□□□□ -1.4
PDI1	YCL043C	AKL1	P38080	1108 aa	Known RBP	6.29	□□□□□ -1.4
PDI1	YCL043C	HEF3	P53978	1044 aa	Known RBP	6.29	□□□□□ -1.4
PDI1	YCL043C	APC1	P53886	1748 aa		6.29	□□□□□ -1.4
PDI1	YCL043C	YRF1-4	O13559	1382 aa		6.28	□□□□□ -1.4
PDI1	YCL043C	YRB30	P53107	440 aa	Predicted RBP	6.28	□□□□□ -1.4
PDI1	YCL043C	DSD1	P53095	428 aa		6.27	□□□□□ -1.41
PDI1	YCL043C	RTT109	Q07794	436 aa		6.27	□□□□□ -1.41
PDI1	YCL043C	URB1	P34241	1764 aa	Known RBP	6.27	□□□□□ -1.41
PDI1	YCL043C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	6.27	□□□□□ -1.41	not detected
PDI1	YCL043C	FKS3	Q04952	1785 aa		6.26	□□□□□ -1.41
PDI1	YCL043C	YLR271W	Q06152	274 aa		6.26	□□□□□ -1.41
PDI1	YCL043C	TCB1	Q12466	1186 aa		6.26	□□□□□ -1.41
PDI1	YCL043C	HSP104	P31539	908 aa	Known RBP	6.25	□□□□□ -1.41
PDI1	YCL043C	NTH2	P35172	780 aa		6.25	□□□□□ -1.41
PDI1	YCL043C	XKS1	P42826	600 aa		6.24	□□□□□ -1.41
PDI1	YCL043C	YNL050C	P53952	270 aa		6.24	□□□□□ -1.41
PDI1	YCL043C	ENT1	Q12518	454 aa		6.24	□□□□□ -1.41
PDI1	YCL043C	RCR1	P38212	213 aa		6.23	□□□□□ -1.41
PDI1	YCL043C	SLN1	P39928	1220 aa	Predicted RBP	6.23	□□□□□ -1.41
PDI1	YCL043C	APP1	P53933	587 aa		6.23	□□□□□ -1.41
PDI1	YCL043C	AIM44	Q99299	758 aa		6.23	□□□□□ -1.41
PDI1	YCL043C	SIR4	P11978	1358 aa		6.22	□□□□□ -1.41
PDI1	YCL043C	RSF2	P46974	1380 aa		6.22	□□□□□ -1.41
PDI1	YCL043C	SPB4	P25808	606 aa	Predicted RBP	6.22	□□□□□ -1.41
PDI1	YCL043C	VPS24	P36095	224 aa	Known RBP	6.22	□□□□□ -1.41
PDI1	YCL043C	YIL092W	P40497	633 aa		6.22	□□□□□ -1.41
PDI1	YCL043C	CTF4	Q01454	927 aa		6.22	□□□□□ -1.41
PDI1	YCL043C	ENV9	Q08651	330 aa		6.22	□□□□□ -1.41
PDI1	YCL043C	RAD2	P07276	1031 aa		6.21	□□□□□ -1.42
PDI1	YCL043C	DAL5	P15365	543 aa		6.21	□□□□□ -1.42
PDI1	YCL043C	RRT14	P40470	206 aa		6.21	□□□□□ -1.42
PDI1	YCL043C	MGA2	P40578	1113 aa		6.21	□□□□□ -1.42
PDI1	YCL043C	GYP7	P48365	746 aa		6.21	□□□□□ -1.42
PDI1	YCL043C	ZDS1	P50111	915 aa	Known RBP	6.21	□□□□□ -1.42
PDI1	YCL043C	AOS1	Q06624	347 aa		6.21	□□□□□ -1.42
PDI1	YCL043C	NOT3	P06102	836 aa	Known RBP	6.2	□□□□□ -1.42
PDI1	YCL043C	PRI1	P10363	409 aa		6.2	□□□□□ -1.42
PDI1	YCL043C	PCT1	P13259	424 aa		6.2	□□□□□ -1.42
PDI1	YCL043C	MAM1	P40065	302 aa		6.2	□□□□□ -1.42
PDI1	YCL043C	NOP58	Q12499	511 aa	Known RBP	6.2	□□□□□ -1.42
PDI1	YCL043C	EDE1	P34216	1381 aa		6.2	□□□□□ -1.42
PDI1	YCL043C	YIL055C	P40523	627 aa	Known RBP	6.19	□□□□□ -1.42
PDI1	YCL043C	MAK21	Q12176	1025 aa	Known RBP	6.19	□□□□□ -1.42
PDI1	YCL043C	IES2	P40154	320 aa		6.18	□□□□□ -1.42
PDI1	YCL043C	INP54	Q08227	384 aa	Known RBP	6.18	□□□□□ -1.42
PDI1	YCL043C	YRF1-3	P0CX14	1859 aa		6.18	□□□□□ -1.42
PDI1	YCL043C	YRF1-7	P0CX15	1859 aa		6.18	□□□□□ -1.42
PDI1	YCL043C	YRF1-6	P53819	1859 aa		6.18	□□□□□ -1.42
PDI1	YCL043C	NUP145	P49687	1317 aa		6.18	□□□□□ -1.42
PDI1	YCL043C	MSP1	P28737	362 aa		6.18	□□□□□ -1.42
PDI1	YCL043C	YBR287W	P38355	427 aa		6.18	□□□□□ -1.42
PDI1	YCL043C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	6.18	□□□□□ -1.42	not detected
PDI1	YCL043C	SRT1	Q03175	343 aa		6.18	□□□□□ -1.42
PDI1	YCL043C	BMS1	Q08965	1183 aa	Known RBP	6.18	□□□□□ -1.42
PDI1	YCL043C	COQ4	O13525	335 aa		6.17	□□□□□ -1.42
PDI1	YCL043C	KCC4	P25389	1037 aa		6.17	□□□□□ -1.42
PDI1	YCL043C	DJP1	P40564	432 aa		6.17	□□□□□ -1.42
PDI1	YCL043C	YGR130C	P53278	816 aa		6.17	□□□□□ -1.42
PDI1	YCL043C	ADE16	P54113	591 aa	Known RBP	6.17	□□□□□ -1.42
PDI1	YCL043C	LSP1	Q12230	341 aa	Known RBP	6.17	□□□□□ -1.42
PDI1	YCL043C	UGA3	P26370	528 aa		6.16	□□□□□ -1.42
PDI1	YCL043C	POL32	P47110	350 aa		6.16	□□□□□ -1.42
PDI1	YCL043C	CTR9	P89105	1077 aa		6.16	□□□□□ -1.42
PDI1	YCL043C	IMH1	Q06704	911 aa	Known RBP	6.16	□□□□□ -1.42
PDI1	YCL043C	OSM1	P21375	501 aa	Known RBP	6.15	□□□□□ -1.42
PDI1	YCL043C	YKL133C	P36066	463 aa		6.15	□□□□□ -1.42
PDI1	YCL043C	ARL1	P38116	183 aa	Known RBP	6.15	□□□□□ -1.42
PDI1	YCL043C	MEC3	Q02574	474 aa		6.15	□□□□□ -1.42
PDI1	YCL043C	NSE3	Q05541	303 aa		6.15	□□□□□ -1.42
PDI1	YCL043C	FRK1	Q03002	865 aa	Predicted RBP	6.14	□□□□□ -1.43
PDI1	YCL043C	PUF6	Q04373	656 aa	Known RBP	6.14	□□□□□ -1.43
PDI1	YCL043C	TRP5	P00931	707 aa	Known RBP	6.13	□□□□□ -1.43
PDI1	YCL043C	CST9	Q06032	482 aa		6.13	□□□□□ -1.43
PDI1	YCL043C	YOL057W	Q08225	711 aa		6.13	□□□□□ -1.43
PDI1	YCL043C	ALE1	Q08548	619 aa		6.13	□□□□□ -1.43
PDI1	YCL043C	LYS2	P07702	1392 aa		6.13	□□□□□ -1.43
PDI1	YCL043C	RAD4	P14736	754 aa		6.12	□□□□□ -1.43
PDI1	YCL043C	DOT5	P40553	215 aa		6.12	□□□□□ -1.43
PDI1	YCL043C	YPP1	P46951	817 aa		6.12	□□□□□ -1.43
PDI1	YCL043C	CSI1	Q04368	295 aa		6.12	□□□□□ -1.43
PDI1	YCL043C	ATG13	Q06628	738 aa		6.12	□□□□□ -1.43
PDI1	YCL043C	NOP53	Q12080	455 aa	Known RBP	6.12	□□□□□ -1.43
PDI1	YCL043C	ROM2	P51862	1356 aa	Known RBP	6.12	□□□□□ -1.43
PDI1	YCL043C	RIX1	P38883	763 aa	Predicted RBP	6.11	□□□□□ -1.43
PDI1	YCL043C	FOX2	Q02207	900 aa	Known RBP	6.11	□□□□□ -1.43
PDI1	YCL043C	KNS1	P32350	737 aa	Predicted RBP	6.1	□□□□□ -1.43
PDI1	YCL043C	ILV3	P39522	585 aa	Known RBP	6.1	□□□□□ -1.43
PDI1	YCL043C	YBP2	P53169	641 aa		6.1	□□□□□ -1.43
PDI1	YCL043C	YGR122W	P53272	402 aa		6.1	□□□□□ -1.43
PDI1	YCL043C	ZDS2	P54786	942 aa		6.1	□□□□□ -1.43
PDI1	YCL043C	COB	P00163	385 aa		6.1	□□□□□ -1.43
PDI1	YCL043C	RPS19A	P07280	144 aa	Known RBP	6.1	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms