RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W GCD11P32481 527 aaKnown RBP3.47□□□□□ -1.85
SNF5YBR289W RRD1P40454 393 aaKnown RBP3.47□□□□□ -1.85
SNF5YBR289W CST6P40535 587 aa3.47□□□□□ -1.85
SNF5YBR289W RRN7P40992 514 aa3.47□□□□□ -1.85
SNF5YBR289W NOP8Q08287 484 aaPredicted RBP3.46□□□□□ -1.86
SNF5YBR289W YPR204WQ08995 1032 aa3.45□□□□□ -1.86
SNF5YBR289W AMS1P22855 1083 aa3.45□□□□□ -1.86
SNF5YBR289W SPT5P27692 1063 aaKnown RBP3.45□□□□□ -1.86
SNF5YBR289W EMP47P43555 445 aa3.45□□□□□ -1.86
SNF5YBR289W TGL4P36165 910 aa3.44□□□□□ -1.86
SNF5YBR289W SAS4Q04003 481 aa3.44□□□□□ -1.86
SNF5YBR289W KTR2P33550 425 aa3.43□□□□□ -1.86
SNF5YBR289W BDP1P46678 594 aa3.43□□□□□ -1.86
SNF5YBR289W CLA4P48562 842 aa3.43□□□□□ -1.86
SNF5YBR289W SUV3P32580 737 aa3.42□□□□□ -1.86
SNF5YBR289W IXR1P33417 597 aa3.42□□□□□ -1.86
SNF5YBR289W ROM1P53046 1155 aa3.42□□□□□ -1.86
SNF5YBR289W SSA1P10591 642 aaKnown RBP3.41□□□□□ -1.86
SNF5YBR289W NPL4P33755 580 aa3.41□□□□□ -1.86
SNF5YBR289W GEF1P37020 779 aa3.41□□□□□ -1.86
SNF5YBR289W CWC15Q03772 175 aaKnown RBP3.41□□□□□ -1.86
SNF5YBR289W TRL1P09880 827 aaKnown RBP3.41□□□□□ -1.86
SNF5YBR289W TRK1P12685 1235 aa3.41□□□□□ -1.86
SNF5YBR289W ACS2P52910 683 aaKnown RBP3.41□□□□□ -1.86
SNF5YBR289W PUS5Q06244 254 aa3.41□□□□□ -1.86
SNF5YBR289W ALR1Q08269 859 aa3.41□□□□□ -1.86
SNF5YBR289W TEC1P18412 486 aa3.4□□□□□ -1.86
SNF5YBR289W SEN54Q02825 467 aaPredicted RBP3.4□□□□□ -1.86
SNF5YBR289W EMW1P42842 904 aaKnown RBP3.4□□□□□ -1.87
SNF5YBR289W HGH1P48362 394 aaKnown RBP3.4□□□□□ -1.87
SNF5YBR289W YEL077CQ3E7X8 1277 aa3.4□□□□□ -1.87
SNF5YBR289W SSA4P22202 642 aaKnown RBP3.39□□□□□ -1.87
SNF5YBR289W MRF1P30775 413 aaPredicted RBP3.39□□□□□ -1.87
SNF5YBR289W MRT4P33201 236 aaKnown RBP3.39□□□□□ -1.87
SNF5YBR289W GAL2P13181 574 aa3.38□□□□□ -1.87
SNF5YBR289W MRX12P47084 519 aa3.38□□□□□ -1.87
SNF5YBR289W YML020WQ03722 664 aa3.38□□□□□ -1.87
SNF5YBR289W UTP13Q05946 817 aaKnown RBP3.38□□□□□ -1.87
SNF5YBR289W AIR1P40507 360 aaKnown RBP3.37□□□□□ -1.87
SNF5YBR289W TBF1Q02457 562 aa3.37□□□□□ -1.87
SNF5YBR289W ECM23Q02710 187 aa3.37□□□□□ -1.87
SNF5YBR289W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SNF5YBR289W MET32Q12041 191 aa3.37□□□□□ -1.87
SNF5YBR289W SOH1P38633 127 aa3.37□□□□□ -1.87
SNF5YBR289W BOL3P39724 118 aa3.36□□□□□ -1.87
SNF5YBR289W STE20Q03497 939 aaKnown RBP3.36□□□□□ -1.87
SNF5YBR289W YBL086CP38177 466 aa3.36□□□□□ -1.87
SNF5YBR289W SLX8P40072 274 aa3.36□□□□□ -1.87
SNF5YBR289W APP1P53933 587 aa3.36□□□□□ -1.87
SNF5YBR289W YPQ2Q06328 317 aa3.36□□□□□ -1.87
SNF5YBR289W HDA3Q06623 655 aa3.36□□□□□ -1.87
SNF5YBR289W GUT2P32191 649 aa3.35□□□□□ -1.87
SNF5YBR289W SPT16P32558 1035 aaKnown RBP3.35□□□□□ -1.87
SNF5YBR289W BOI1P38041 980 aaKnown RBP3.35□□□□□ -1.87
SNF5YBR289W RGA1P39083 1007 aa3.35□□□□□ -1.87
SNF5YBR289W KXD1P53158 218 aa3.35□□□□□ -1.87
SNF5YBR289W ISR1Q06098 443 aaKnown RBP3.35□□□□□ -1.87
SNF5YBR289W SIS2P36024 562 aa3.35□□□□□ -1.87
SNF5YBR289W KTR7P40504 517 aa3.35□□□□□ -1.87
SNF5YBR289W MDJ2P42834 146 aa3.35□□□□□ -1.87
SNF5YBR289W YPP1P46951 817 aa3.35□□□□□ -1.87
SNF5YBR289W STE6P12866 1290 aa3.34□□□□□ -1.87
SNF5YBR289W PHO87P25360 923 aa3.34□□□□□ -1.87
SNF5YBR289W SSF1P38789 453 aaPredicted RBP3.34□□□□□ -1.87
SNF5YBR289W TSC13Q99190 310 aa3.34□□□□□ -1.87
SNF5YBR289W RPL34BP40525 121 aaKnown RBP3.34□□□□□ -1.88
SNF5YBR289W ISU1Q03020 165 aa3.34□□□□□ -1.88
SNF5YBR289W PUF6Q04373 656 aaKnown RBP3.34□□□□□ -1.88
SNF5YBR289W RRP15Q06511 250 aaPredicted RBP3.34□□□□□ -1.88
SNF5YBR289W SPT2P06843 333 aaPredicted RBP3.33□□□□□ -1.88
SNF5YBR289W UBP1P25037 809 aa3.33□□□□□ -1.88
SNF5YBR289W YNL165WP53891 406 aa3.33□□□□□ -1.88
SNF5YBR289W RGA2Q06407 1009 aa3.33□□□□□ -1.88
SNF5YBR289W FBP26P32604 452 aa3.33□□□□□ -1.88
SNF5YBR289W UBX7P38349 436 aa3.33□□□□□ -1.88
SNF5YBR289W HXT5P38695 592 aa3.33□□□□□ -1.88
SNF5YBR289W CAB1Q04430 367 aa3.33□□□□□ -1.88
SNF5YBR289W WHI5Q12416 295 aa3.33□□□□□ -1.88
SNF5YBR289W RPS31P05759 152 aaKnown RBP3.32□□□□□ -1.88
SNF5YBR289W PDI1P17967 522 aaKnown RBP3.32□□□□□ -1.88
SNF5YBR289W FRK1Q03002 865 aaPredicted RBP3.32□□□□□ -1.88
SNF5YBR289W ATG20Q07528 640 aa3.32□□□□□ -1.88
SNF5YBR289W GPI13Q07830 1017 aa3.32□□□□□ -1.88
SNF5YBR289W MNL2Q12205 849 aa3.32□□□□□ -1.88
SNF5YBR289W SWI5P08153 709 aa3.32□□□□□ -1.88
SNF5YBR289W AIM9P40053 627 aaKnown RBP3.32□□□□□ -1.88
SNF5YBR289W TY1A-DR3Q12441 440 aa3.32□□□□□ -1.88
SNF5YBR289W NGR1P32831 672 aaKnown RBP3.31□□□□□ -1.88
SNF5YBR289W HED1Q03937 162 aa3.31□□□□□ -1.88
SNF5YBR289W FRT1Q99332 602 aa3.31□□□□□ -1.88
SNF5YBR289W MIP1P15801 1254 aa3.31□□□□□ -1.88
SNF5YBR289W ERP5P38819 212 aa3.31□□□□□ -1.88
SNF5YBR289W APC11Q12157 165 aa3.31□□□□□ -1.88
SNF5YBR289W SHM1P37292 490 aaPredicted RBP3.3□□□□□ -1.88
SNF5YBR289W SSN3P39073 555 aa3.3□□□□□ -1.88
SNF5YBR289W SYH1Q02875 849 aaKnown RBP3.3□□□□□ -1.88
SNF5YBR289W NAB2P32505 525 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SNF5YBR289W SLA1P32790 1244 aa3.3□□□□□ -1.88
SNF5YBR289W ENV9Q08651 330 aa3.3□□□□□ -1.88
SNF5YBR289W BRE2P43132 505 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms