RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB3, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB3YBR278W ENO1P00924 437 aaKnown RBP5.21□□□□□ -1.58
DPB3YBR278W TRM1P15565 570 aaKnown RBP5.21□□□□□ -1.58
DPB3YBR278W SIS2P36024 562 aa5.21□□□□□ -1.58
DPB3YBR278W RIM21P48565 533 aa5.21□□□□□ -1.58
DPB3YBR278W YDJ1P25491 409 aaKnown RBP5.2□□□□□ -1.58
DPB3YBR278W PAC1P39946 494 aaKnown RBP5.2□□□□□ -1.58
DPB3YBR278W NOB1Q08444 459 aaKnown RBP5.2□□□□□ -1.58
DPB3YBR278W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
DPB3YBR278W TUB4P53378 473 aa5.19□□□□□ -1.58
DPB3YBR278W YPL062WQ02781 134 aa5.19□□□□□ -1.58
DPB3YBR278W MRX10Q05648 414 aa5.19□□□□□ -1.58
DPB3YBR278W NAF1P53919 492 aaKnown RBP5.18□□□□□ -1.58
DPB3YBR278W RPL34AP87262 121 aaPredicted RBP5.18□□□□□ -1.58
DPB3YBR278W PUP1P25043 261 aa5.17□□□□□ -1.58
DPB3YBR278W YPP1P46951 817 aa5.17□□□□□ -1.58
DPB3YBR278W TBF1Q02457 562 aa5.17□□□□□ -1.58
DPB3YBR278W MCM16Q12262 181 aa5.17□□□□□ -1.58
DPB3YBR278W MOD5P07884 428 aa5.16□□□□□ -1.58
DPB3YBR278W PUS6P53294 404 aa5.16□□□□□ -1.58
DPB3YBR278W HST3P53687 447 aa5.16□□□□□ -1.58
DPB3YBR278W AGE1Q04412 482 aa5.16□□□□□ -1.58
DPB3YBR278W YML083CQ04526 418 aa5.16□□□□□ -1.58
DPB3YBR278W CDC3P32457 520 aaKnown RBP5.15□□□□□ -1.59
DPB3YBR278W ASH1P34233 588 aa5.15□□□□□ -1.59
DPB3YBR278W KXD1P53158 218 aa5.15□□□□□ -1.59
DPB3YBR278W PUS5Q06244 254 aa5.15□□□□□ -1.59
DPB3YBR278W TGL4P36165 910 aa5.14□□□□□ -1.59
DPB3YBR278W YDL206WQ12424 762 aa5.14□□□□□ -1.59
DPB3YBR278W RDS2P19541 446 aaKnown RBP5.13□□□□□ -1.59
DPB3YBR278W MET22P32179 357 aa5.13□□□□□ -1.59
DPB3YBR278W PEP12P32854 288 aa5.13□□□□□ -1.59
DPB3YBR278W MET32Q12041 191 aa5.13□□□□□ -1.59
DPB3YBR278W AFT1P22149 690 aa5.12□□□□□ -1.59
DPB3YBR278W SSF1P38789 453 aaPredicted RBP5.12□□□□□ -1.59
DPB3YBR278W ENV9Q08651 330 aa5.12□□□□□ -1.59
DPB3YBR278W YDR444WQ04093 687 aa5.11□□□□□ -1.59
DPB3YBR278W ISF1P32488 338 aa5.1□□□□□ -1.59
DPB3YBR278W RPA14P50106 137 aa5.1□□□□□ -1.59
DPB3YBR278W HXT10P43581 546 aa5.09□□□□□ -1.59
DPB3YBR278W MRX12P47084 519 aa5.09□□□□□ -1.59
DPB3YBR278W SYH1Q02875 849 aaKnown RBP5.09□□□□□ -1.59
DPB3YBR278W TEC1P18412 486 aa5.08□□□□□ -1.6
DPB3YBR278W TPD3P31383 635 aa5.08□□□□□ -1.6
DPB3YBR278W SLD2P34252 453 aa5.08□□□□□ -1.6
DPB3YBR278W RRD1P40454 393 aaKnown RBP5.08□□□□□ -1.6
DPB3YBR278W KTR7P40504 517 aa5.08□□□□□ -1.6
DPB3YBR278W EMP47P43555 445 aa5.08□□□□□ -1.6
DPB3YBR278W ECM23Q02710 187 aa5.07□□□□□ -1.6
DPB3YBR278W YPR097WQ06839 1073 aa5.07□□□□□ -1.6
DPB3YBR278W FRA1Q07825 749 aa5.07□□□□□ -1.6
DPB3YBR278W ALR1Q08269 859 aa5.07□□□□□ -1.6
DPB3YBR278W PDC1P06169 563 aaKnown RBP5.06□□□□□ -1.6
DPB3YBR278W GAL2P13181 574 aa5.06□□□□□ -1.6
DPB3YBR278W ATG3P40344 310 aa5.06□□□□□ -1.6
DPB3YBR278W FIG4P42837 879 aa5.06□□□□□ -1.6
DPB3YBR278W YJR115WP47152 169 aa5.06□□□□□ -1.6
DPB3YBR278W LCB5Q06147 687 aaKnown RBP5.06□□□□□ -1.6
DPB3YBR278W YPR084WQ06821 456 aa5.06□□□□□ -1.6
DPB3YBR278W HAT1Q12341 374 aa5.06□□□□□ -1.6
DPB3YBR278W KIP2P28743 706 aa5.05□□□□□ -1.6
DPB3YBR278W GUT2P32191 649 aa5.05□□□□□ -1.6
DPB3YBR278W SEN54Q02825 467 aaPredicted RBP5.05□□□□□ -1.6
DPB3YBR278W STE20Q03497 939 aaKnown RBP5.05□□□□□ -1.6
DPB3YBR278W UGA3P26370 528 aa5.04□□□□□ -1.6
DPB3YBR278W UBX7P38349 436 aa5.04□□□□□ -1.6
DPB3YBR278W APL6P46682 809 aa5.04□□□□□ -1.6
DPB3YBR278W MSB3P48566 633 aaPredicted RBP5.04□□□□□ -1.6
DPB3YBR278W SRF1Q12516 437 aa5.03□□□□□ -1.6
DPB3YBR278W PHO87P25360 923 aa5.02□□□□□ -1.61
DPB3YBR278W IXR1P33417 597 aa5.02□□□□□ -1.61
DPB3YBR278W UTP13Q05946 817 aaKnown RBP5.02□□□□□ -1.61
DPB3YBR278W TPS3P38426 1054 aaKnown RBP5.01□□□□□ -1.61
DPB3YBR278W SOH1P38633 127 aa5.01□□□□□ -1.61
DPB3YBR278W YBL113CQ7M4S9 792 aa5□□□□□ -1.61
DPB3YBR278W HAP4P14064 554 aa4.99□□□□□ -1.61
DPB3YBR278W VAC17P25591 423 aa4.99□□□□□ -1.61
DPB3YBR278W STM1P39015 273 aaKnown RBP4.99□□□□□ -1.61
DPB3YBR278W ACS2P52910 683 aaKnown RBP4.99□□□□□ -1.61
DPB3YBR278W YLR346CQ06139 101 aa4.99□□□□□ -1.61
DPB3YBR278W ERP5P38819 212 aa4.98□□□□□ -1.61
DPB3YBR278W PTK2P47116 818 aaKnown RBP4.98□□□□□ -1.61
DPB3YBR278W ROM1P53046 1155 aa4.98□□□□□ -1.61
DPB3YBR278W CWC15Q03772 175 aaKnown RBP4.98□□□□□ -1.61
DPB3YBR278W PUF6Q04373 656 aaKnown RBP4.98□□□□□ -1.61
DPB3YBR278W KAR5Q04746 504 aa4.98□□□□□ -1.61
DPB3YBR278W GAS4Q08271 471 aa4.98□□□□□ -1.61
DPB3YBR278W HEM3P28789 327 aa4.97□□□□□ -1.61
DPB3YBR278W SNU71P53207 620 aaKnown RBP4.97□□□□□ -1.61
DPB3YBR278W YDL176WQ12027 708 aa4.97□□□□□ -1.61
DPB3YBR278W SEC20P28791 383 aa4.96□□□□□ -1.62
DPB3YBR278W HAL5P38970 855 aaKnown RBP4.96□□□□□ -1.62
DPB3YBR278W IPL1P38991 367 aa4.96□□□□□ -1.62
DPB3YBR278W RTT106P40161 455 aa4.96□□□□□ -1.62
DPB3YBR278W NOP7P53261 605 aaKnown RBP4.96□□□□□ -1.62
DPB3YBR278W TSC13Q99190 310 aa4.96□□□□□ -1.62
DPB3YBR278W RRN6P32786 894 aa4.95□□□□□ -1.62
DPB3YBR278W MRT4P33201 236 aaKnown RBP4.95□□□□□ -1.62
DPB3YBR278W ISR1Q06098 443 aaKnown RBP4.95□□□□□ -1.62
DPB3YBR278W MIP1P15801 1254 aa4.94□□□□□ -1.62
DPB3YBR278W PDI1P17967 522 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms