RNA–Protein interactions for RNA: YBR278W

DPB3, Transcript of Third-largest subunit of DNA polymerase II (DNA polymerase epsilon), yeast

Gene DPB3, Length 606 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB3	YBR278W	ENO1	P00924	437 aa	Known RBP	5.21	□□□□□ -1.58
DPB3	YBR278W	TRM1	P15565	570 aa	Known RBP	5.21	□□□□□ -1.58
DPB3	YBR278W	SIS2	P36024	562 aa		5.21	□□□□□ -1.58
DPB3	YBR278W	RIM21	P48565	533 aa		5.21	□□□□□ -1.58
DPB3	YBR278W	YDJ1	P25491	409 aa	Known RBP	5.2	□□□□□ -1.58
DPB3	YBR278W	PAC1	P39946	494 aa	Known RBP	5.2	□□□□□ -1.58
DPB3	YBR278W	NOB1	Q08444	459 aa	Known RBP	5.2	□□□□□ -1.58
DPB3	YBR278W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
DPB3	YBR278W	TUB4	P53378	473 aa		5.19	□□□□□ -1.58
DPB3	YBR278W	YPL062W	Q02781	134 aa		5.19	□□□□□ -1.58
DPB3	YBR278W	MRX10	Q05648	414 aa		5.19	□□□□□ -1.58
DPB3	YBR278W	NAF1	P53919	492 aa	Known RBP	5.18	□□□□□ -1.58
DPB3	YBR278W	RPL34A	P87262	121 aa	Predicted RBP	5.18	□□□□□ -1.58
DPB3	YBR278W	PUP1	P25043	261 aa		5.17	□□□□□ -1.58
DPB3	YBR278W	YPP1	P46951	817 aa		5.17	□□□□□ -1.58
DPB3	YBR278W	TBF1	Q02457	562 aa		5.17	□□□□□ -1.58
DPB3	YBR278W	MCM16	Q12262	181 aa		5.17	□□□□□ -1.58
DPB3	YBR278W	MOD5	P07884	428 aa		5.16	□□□□□ -1.58
DPB3	YBR278W	PUS6	P53294	404 aa		5.16	□□□□□ -1.58
DPB3	YBR278W	HST3	P53687	447 aa		5.16	□□□□□ -1.58
DPB3	YBR278W	AGE1	Q04412	482 aa		5.16	□□□□□ -1.58
DPB3	YBR278W	YML083C	Q04526	418 aa		5.16	□□□□□ -1.58
DPB3	YBR278W	CDC3	P32457	520 aa	Known RBP	5.15	□□□□□ -1.59
DPB3	YBR278W	ASH1	P34233	588 aa		5.15	□□□□□ -1.59
DPB3	YBR278W	KXD1	P53158	218 aa		5.15	□□□□□ -1.59
DPB3	YBR278W	PUS5	Q06244	254 aa		5.15	□□□□□ -1.59
DPB3	YBR278W	TGL4	P36165	910 aa		5.14	□□□□□ -1.59
DPB3	YBR278W	YDL206W	Q12424	762 aa		5.14	□□□□□ -1.59
DPB3	YBR278W	RDS2	P19541	446 aa	Known RBP	5.13	□□□□□ -1.59
DPB3	YBR278W	MET22	P32179	357 aa		5.13	□□□□□ -1.59
DPB3	YBR278W	PEP12	P32854	288 aa		5.13	□□□□□ -1.59
DPB3	YBR278W	MET32	Q12041	191 aa		5.13	□□□□□ -1.59
DPB3	YBR278W	AFT1	P22149	690 aa		5.12	□□□□□ -1.59
DPB3	YBR278W	SSF1	P38789	453 aa	Predicted RBP	5.12	□□□□□ -1.59
DPB3	YBR278W	ENV9	Q08651	330 aa		5.12	□□□□□ -1.59
DPB3	YBR278W	YDR444W	Q04093	687 aa		5.11	□□□□□ -1.59
DPB3	YBR278W	ISF1	P32488	338 aa		5.1	□□□□□ -1.59
DPB3	YBR278W	RPA14	P50106	137 aa		5.1	□□□□□ -1.59
DPB3	YBR278W	HXT10	P43581	546 aa		5.09	□□□□□ -1.59
DPB3	YBR278W	MRX12	P47084	519 aa		5.09	□□□□□ -1.59
DPB3	YBR278W	SYH1	Q02875	849 aa	Known RBP	5.09	□□□□□ -1.59
DPB3	YBR278W	TEC1	P18412	486 aa		5.08	□□□□□ -1.6
DPB3	YBR278W	TPD3	P31383	635 aa		5.08	□□□□□ -1.6
DPB3	YBR278W	SLD2	P34252	453 aa		5.08	□□□□□ -1.6
DPB3	YBR278W	RRD1	P40454	393 aa	Known RBP	5.08	□□□□□ -1.6
DPB3	YBR278W	KTR7	P40504	517 aa		5.08	□□□□□ -1.6
DPB3	YBR278W	EMP47	P43555	445 aa		5.08	□□□□□ -1.6
DPB3	YBR278W	ECM23	Q02710	187 aa		5.07	□□□□□ -1.6
DPB3	YBR278W	YPR097W	Q06839	1073 aa		5.07	□□□□□ -1.6
DPB3	YBR278W	FRA1	Q07825	749 aa		5.07	□□□□□ -1.6
DPB3	YBR278W	ALR1	Q08269	859 aa		5.07	□□□□□ -1.6
DPB3	YBR278W	PDC1	P06169	563 aa	Known RBP	5.06	□□□□□ -1.6
DPB3	YBR278W	GAL2	P13181	574 aa		5.06	□□□□□ -1.6
DPB3	YBR278W	ATG3	P40344	310 aa		5.06	□□□□□ -1.6
DPB3	YBR278W	FIG4	P42837	879 aa		5.06	□□□□□ -1.6
DPB3	YBR278W	YJR115W	P47152	169 aa		5.06	□□□□□ -1.6
DPB3	YBR278W	LCB5	Q06147	687 aa	Known RBP	5.06	□□□□□ -1.6
DPB3	YBR278W	YPR084W	Q06821	456 aa		5.06	□□□□□ -1.6
DPB3	YBR278W	HAT1	Q12341	374 aa		5.06	□□□□□ -1.6
DPB3	YBR278W	KIP2	P28743	706 aa		5.05	□□□□□ -1.6
DPB3	YBR278W	GUT2	P32191	649 aa		5.05	□□□□□ -1.6
DPB3	YBR278W	SEN54	Q02825	467 aa	Predicted RBP	5.05	□□□□□ -1.6
DPB3	YBR278W	STE20	Q03497	939 aa	Known RBP	5.05	□□□□□ -1.6
DPB3	YBR278W	UGA3	P26370	528 aa		5.04	□□□□□ -1.6
DPB3	YBR278W	UBX7	P38349	436 aa		5.04	□□□□□ -1.6
DPB3	YBR278W	APL6	P46682	809 aa		5.04	□□□□□ -1.6
DPB3	YBR278W	MSB3	P48566	633 aa	Predicted RBP	5.04	□□□□□ -1.6
DPB3	YBR278W	SRF1	Q12516	437 aa		5.03	□□□□□ -1.6
DPB3	YBR278W	PHO87	P25360	923 aa		5.02	□□□□□ -1.61
DPB3	YBR278W	IXR1	P33417	597 aa		5.02	□□□□□ -1.61
DPB3	YBR278W	UTP13	Q05946	817 aa	Known RBP	5.02	□□□□□ -1.61
DPB3	YBR278W	TPS3	P38426	1054 aa	Known RBP	5.01	□□□□□ -1.61
DPB3	YBR278W	SOH1	P38633	127 aa		5.01	□□□□□ -1.61
DPB3	YBR278W	YBL113C	Q7M4S9	792 aa		5	□□□□□ -1.61
DPB3	YBR278W	HAP4	P14064	554 aa		4.99	□□□□□ -1.61
DPB3	YBR278W	VAC17	P25591	423 aa		4.99	□□□□□ -1.61
DPB3	YBR278W	STM1	P39015	273 aa	Known RBP	4.99	□□□□□ -1.61
DPB3	YBR278W	ACS2	P52910	683 aa	Known RBP	4.99	□□□□□ -1.61
DPB3	YBR278W	YLR346C	Q06139	101 aa		4.99	□□□□□ -1.61
DPB3	YBR278W	ERP5	P38819	212 aa		4.98	□□□□□ -1.61
DPB3	YBR278W	PTK2	P47116	818 aa	Known RBP	4.98	□□□□□ -1.61
DPB3	YBR278W	ROM1	P53046	1155 aa		4.98	□□□□□ -1.61
DPB3	YBR278W	CWC15	Q03772	175 aa	Known RBP	4.98	□□□□□ -1.61
DPB3	YBR278W	PUF6	Q04373	656 aa	Known RBP	4.98	□□□□□ -1.61
DPB3	YBR278W	KAR5	Q04746	504 aa		4.98	□□□□□ -1.61
DPB3	YBR278W	GAS4	Q08271	471 aa		4.98	□□□□□ -1.61
DPB3	YBR278W	HEM3	P28789	327 aa		4.97	□□□□□ -1.61
DPB3	YBR278W	SNU71	P53207	620 aa	Known RBP	4.97	□□□□□ -1.61
DPB3	YBR278W	YDL176W	Q12027	708 aa		4.97	□□□□□ -1.61
DPB3	YBR278W	SEC20	P28791	383 aa		4.96	□□□□□ -1.62
DPB3	YBR278W	HAL5	P38970	855 aa	Known RBP	4.96	□□□□□ -1.62
DPB3	YBR278W	IPL1	P38991	367 aa		4.96	□□□□□ -1.62
DPB3	YBR278W	RTT106	P40161	455 aa		4.96	□□□□□ -1.62
DPB3	YBR278W	NOP7	P53261	605 aa	Known RBP	4.96	□□□□□ -1.62
DPB3	YBR278W	TSC13	Q99190	310 aa		4.96	□□□□□ -1.62
DPB3	YBR278W	RRN6	P32786	894 aa		4.95	□□□□□ -1.62
DPB3	YBR278W	MRT4	P33201	236 aa	Known RBP	4.95	□□□□□ -1.62
DPB3	YBR278W	ISR1	Q06098	443 aa	Known RBP	4.95	□□□□□ -1.62
DPB3	YBR278W	MIP1	P15801	1254 aa		4.94	□□□□□ -1.62
DPB3	YBR278W	PDI1	P17967	522 aa	Known RBP	4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms