RNA–Protein interactions for RNA: YBR195C

MSI1, Transcript of Subunit of chromatin assembly factor I (CAF-1), yeastyeast

Gene MSI1, Length 1,269 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSI1YBR195C YRF1-3P0CX14 1859 aa9.51□□□□□ -0.89
MSI1YBR195C YRF1-7P0CX15 1859 aa9.51□□□□□ -0.89
MSI1YBR195C YRF1-6P53819 1859 aa9.51□□□□□ -0.89
MSI1YBR195C YBL086CP38177 466 aa9.5□□□□□ -0.89
MSI1YBR195C HSP104P31539 908 aaKnown RBP9.49□□□□□ -0.89
MSI1YBR195C UGA2P38067 497 aa9.49□□□□□ -0.89
MSI1YBR195C LYS4P49367 693 aaPredicted RBP9.49□□□□□ -0.89
MSI1YBR195C ALD2P47771 506 aa9.48□□□□□ -0.89
MSI1YBR195C DSD1P53095 428 aa9.48□□□□□ -0.89
MSI1YBR195C AKL1P38080 1108 aaKnown RBP9.47□□□□□ -0.89
MSI1YBR195C GTT3P39996 337 aa9.47□□□□□ -0.89
MSI1YBR195C INP54Q08227 384 aaKnown RBP9.47□□□□□ -0.89
MSI1YBR195C SNF2P22082 1703 aa9.46□□□□□ -0.89
MSI1YBR195C YKR023WP36119 530 aaKnown RBP9.46□□□□□ -0.9
MSI1YBR195C CTF4Q01454 927 aa9.46□□□□□ -0.9
MSI1YBR195C SPT7P35177 1332 aa9.46□□□□□ -0.9
MSI1YBR195C OSM1P21375 501 aaKnown RBP9.45□□□□□ -0.9
MSI1YBR195C SSA2P10592 639 aaKnown RBP9.44□□□□□ -0.9
MSI1YBR195C AOS1Q06624 347 aa9.44□□□□□ -0.9
MSI1YBR195C MSB4Q12317 492 aa9.44□□□□□ -0.9
MSI1YBR195C YBP2P53169 641 aa9.43□□□□□ -0.9
MSI1YBR195C GRX1P25373 110 aaKnown RBP9.42□□□□□ -0.9
MSI1YBR195C NUP145P49687 1317 aa9.41□□□□□ -0.9
MSI1YBR195C RTR1P40084 226 aaPredicted RBP9.41□□□□□ -0.9
MSI1YBR195C BDF1P35817 686 aa9.4□□□□□ -0.9
MSI1YBR195C CTH1P47976 325 aa9.39□□□□□ -0.91
MSI1YBR195C RRP46P53256 223 aaPredicted RBP9.39□□□□□ -0.91
MSI1YBR195C BUG1Q12191 341 aa9.39□□□□□ -0.91
MSI1YBR195C KCC4P25389 1037 aa9.38□□□□□ -0.91
MSI1YBR195C ALD3P54114 506 aa9.38□□□□□ -0.91
MSI1YBR195C RAD4P14736 754 aa9.37□□□□□ -0.91
MSI1YBR195C NTH2P35172 780 aa9.37□□□□□ -0.91
MSI1YBR195C GRE2Q12068 342 aaKnown RBP9.37□□□□□ -0.91
MSI1YBR195C RMT2Q03305 412 aa9.36□□□□□ -0.91
MSI1YBR195C PRD1P25375 712 aa9.35□□□□□ -0.91
MSI1YBR195C IOC4Q04213 475 aa9.35□□□□□ -0.91
MSI1YBR195C ALE1Q08548 619 aa9.35□□□□□ -0.91
MSI1YBR195C RIM15P43565 1770 aa9.33□□□□□ -0.92
MSI1YBR195C UGA3P26370 528 aa9.33□□□□□ -0.92
MSI1YBR195C YNL050CP53952 270 aa9.33□□□□□ -0.92
MSI1YBR195C NSE3Q05541 303 aa9.33□□□□□ -0.92
MSI1YBR195C TUM1Q08686 304 aaKnown RBP9.33□□□□□ -0.92
MSI1YBR195C ZDS1P50111 915 aaKnown RBP9.32□□□□□ -0.92
MSI1YBR195C UTP22P53254 1237 aaPredicted RBP9.32□□□□□ -0.92
MSI1YBR195C HPC2Q01448 625 aa9.32□□□□□ -0.92
MSI1YBR195C YDL144CQ07589 356 aa9.32□□□□□ -0.92
MSI1YBR195C MPP10P47083 593 aaKnown RBP9.31□□□□□ -0.92
MSI1YBR195C NOP53Q12080 455 aaKnown RBP9.31□□□□□ -0.92
MSI1YBR195C TFC8Q12308 588 aa9.31□□□□□ -0.92
MSI1YBR195C BUD27P43573 796 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
MSI1YBR195C MDG1P53885 366 aa9.3□□□□□ -0.92
MSI1YBR195C OXP1P28273 1286 aa9.29□□□□□ -0.92
MSI1YBR195C MAM1P40065 302 aa9.29□□□□□ -0.92
MSI1YBR195C TEA1P47988 759 aa9.29□□□□□ -0.92
MSI1YBR195C SAP155P43612 1002 aa9.28□□□□□ -0.92
MSI1YBR195C THI22Q06490 572 aa9.28□□□□□ -0.92
MSI1YBR195C SER1P33330 395 aaKnown RBP9.27□□□□□ -0.93
MSI1YBR195C RRT14P40470 206 aa9.27□□□□□ -0.93
MSI1YBR195C SSP2Q08646 371 aa9.27□□□□□ -0.93
MSI1YBR195C TOS1P38288 455 aa9.26□□□□□ -0.93
MSI1YBR195C YBR287WP38355 427 aa9.26□□□□□ -0.93
MSI1YBR195C TPD3P31383 635 aa9.25□□□□□ -0.93
MSI1YBR195C CDC27P38042 758 aa9.25□□□□□ -0.93
MSI1YBR195C YFR016CP43597 1233 aaKnown RBP9.25□□□□□ -0.93
MSI1YBR195C GYP7P48365 746 aa9.25□□□□□ -0.93
MSI1YBR195C RTT109Q07794 436 aa9.25□□□□□ -0.93
MSI1YBR195C BMS1Q08965 1183 aaKnown RBP9.25□□□□□ -0.93
MSI1YBR195C PHM7Q12252 991 aa9.25□□□□□ -0.93
MSI1YBR195C NYV1Q12255 253 aa9.25□□□□□ -0.93
MSI1YBR195C LYS2P07702 1392 aa9.24□□□□□ -0.93
MSI1YBR195C YGL082WP53155 381 aa9.24□□□□□ -0.93
MSI1YBR195C RIX7Q07844 837 aaKnown RBP9.24□□□□□ -0.93
MSI1YBR195C CTI6Q08923 506 aa9.24□□□□□ -0.93
MSI1YBR195C COQ4O13525 335 aa9.23□□□□□ -0.93
MSI1YBR195C MSN5P52918 1224 aa9.23□□□□□ -0.93
MSI1YBR195C RPP0P05317 312 aaKnown RBP9.22□□□□□ -0.93
MSI1YBR195C LPD1P09624 499 aaKnown RBP9.22□□□□□ -0.93
MSI1YBR195C SSP1P38871 571 aa9.22□□□□□ -0.93
MSI1YBR195C HOP09932 586 aa9.21□□□□□ -0.94
MSI1YBR195C VPS64Q03944 604 aa9.21□□□□□ -0.94
MSI1YBR195C SSA1P10591 642 aaKnown RBP9.2□□□□□ -0.94
MSI1YBR195C VPS27P40343 622 aaKnown RBP9.2□□□□□ -0.94
MSI1YBR195C EAF6P47128 113 aa9.2□□□□□ -0.94
MSI1YBR195C HEF3P53978 1044 aaKnown RBP9.2□□□□□ -0.94
MSI1YBR195C RAT1Q02792 1006 aaKnown RBP9.19□□□□□ -0.94
MSI1YBR195C APL2P36000 726 aaPredicted RBP9.18□□□□□ -0.94
MSI1YBR195C ZDS2P54786 942 aa9.18□□□□□ -0.94
MSI1YBR195C PKH1Q03407 766 aa9.18□□□□□ -0.94
MSI1YBR195C CDC45Q08032 650 aa9.18□□□□□ -0.94
MSI1YBR195C YOL057WQ08225 711 aa9.18□□□□□ -0.94
MSI1YBR195C SUI2P20459 304 aaKnown RBP9.17□□□□□ -0.94
MSI1YBR195C YKL222CP35995 705 aa9.17□□□□□ -0.94
MSI1YBR195C SRT1Q03175 343 aa9.17□□□□□ -0.94
MSI1YBR195C CTT1P06115 562 aa9.16□□□□□ -0.94
MSI1YBR195C DNM1P54861 757 aa9.16□□□□□ -0.94
MSI1YBR195C IRC3Q06683 689 aa9.16□□□□□ -0.94
MSI1YBR195C ARG8P18544 423 aa9.15□□□□□ -0.94
MSI1YBR195C NSR1P27476 414 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
MSI1YBR195C YER156CP40093 338 aaKnown RBP9.15□□□□□ -0.94
MSI1YBR195C CWH41P53008 833 aa9.15□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms