RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C NOT3P06102 836 aaKnown RBP6.68□□□□□ -1.34
RFA1YAR007C YEF3P16521 1044 aaKnown RBP6.68□□□□□ -1.34
RFA1YAR007C KNS1P32350 737 aaPredicted RBP6.68□□□□□ -1.34
RFA1YAR007C MET10P39692 1035 aa6.68□□□□□ -1.34
RFA1YAR007C TFG1P41895 735 aaPredicted RBP6.68□□□□□ -1.34
RFA1YAR007C GRE2Q12068 342 aaKnown RBP6.68□□□□□ -1.34
RFA1YAR007C SPE2P21182 396 aa6.68□□□□□ -1.34
RFA1YAR007C ARL1P38116 183 aaKnown RBP6.68□□□□□ -1.34
RFA1YAR007C IOC4Q04213 475 aa6.68□□□□□ -1.34
RFA1YAR007C QCR6P00127 147 aa6.67□□□□□ -1.34
RFA1YAR007C RAD2P07276 1031 aa6.67□□□□□ -1.34
RFA1YAR007C SAP30P38429 201 aa6.67□□□□□ -1.34
RFA1YAR007C TRM3Q07527 1436 aa6.67□□□□□ -1.34
RFA1YAR007C VMR1P38735 1592 aa6.67□□□□□ -1.34
RFA1YAR007C PTC3P34221 468 aaKnown RBP6.66□□□□□ -1.34
RFA1YAR007C YPP1P46951 817 aa6.66□□□□□ -1.34
RFA1YAR007C HAP1P0CE41 1502 aa6.66□□□□□ -1.34
RFA1YAR007C RLF2Q12495 606 aa6.66□□□□□ -1.34
RFA1YAR007C DAL5P15365 543 aa6.65□□□□□ -1.34
RFA1YAR007C IML1P47170 1584 aa6.65□□□□□ -1.34
RFA1YAR007C SAP155P43612 1002 aa6.64□□□□□ -1.35
RFA1YAR007C POL32P47110 350 aa6.64□□□□□ -1.35
RFA1YAR007C YDL129WQ07555 291 aa6.64□□□□□ -1.35
RFA1YAR007C LSP1Q12230 341 aaKnown RBP6.64□□□□□ -1.35
RFA1YAR007C BNR1P40450 1375 aa6.64□□□□□ -1.35
RFA1YAR007C COQ8P27697 501 aa6.64□□□□□ -1.35
RFA1YAR007C YIL092WP40497 633 aa6.64□□□□□ -1.35
RFA1YAR007C TEA1P47988 759 aa6.64□□□□□ -1.35
RFA1YAR007C NOP58Q12499 511 aaKnown RBP6.64□□□□□ -1.35
RFA1YAR007C YRF1-1P0CX20 1796 aa6.63□□□□□ -1.35
RFA1YAR007C YRF1-5P0CX21 1796 aa6.63□□□□□ -1.35
RFA1YAR007C YRF1-8P0CX22 1796 aa6.63□□□□□ -1.35
RFA1YAR007C SCT1P32784 759 aa6.63□□□□□ -1.35
RFA1YAR007C SEC7P11075 2009 aaKnown RBP6.62□□□□□ -1.35
RFA1YAR007C NAP1P25293 417 aaKnown RBP6.62□□□□□ -1.35
RFA1YAR007C ATH1P48016 1211 aa6.62□□□□□ -1.35
RFA1YAR007C GUT1P32190 709 aa6.62□□□□□ -1.35
RFA1YAR007C RRP46P53256 223 aaPredicted RBP6.62□□□□□ -1.35
RFA1YAR007C YGR130CP53278 816 aa6.62□□□□□ -1.35
RFA1YAR007C RTR1P40084 226 aaPredicted RBP6.61□□□□□ -1.35
RFA1YAR007C TPD3P31383 635 aa6.6□□□□□ -1.35
RFA1YAR007C YAP3P38749 330 aa6.6□□□□□ -1.35
RFA1YAR007C CHZ1P40019 153 aaPredicted RBP6.6□□□□□ -1.35
RFA1YAR007C BUD27P43573 796 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
RFA1YAR007C ITC1P53125 1264 aa6.6□□□□□ -1.35
RFA1YAR007C URN1Q06525 465 aaKnown RBP6.6□□□□□ -1.35
RFA1YAR007C KRE5P22023 1365 aa6.58□□□□□ -1.36
RFA1YAR007C PUF6Q04373 656 aaKnown RBP6.58□□□□□ -1.36
RFA1YAR007C NUP188P52593 1655 aaKnown RBP6.58□□□□□ -1.36
RFA1YAR007C SOL3P38858 249 aa6.58□□□□□ -1.36
RFA1YAR007C PML39Q03760 334 aa6.58□□□□□ -1.36
RFA1YAR007C THI22Q06490 572 aa6.58□□□□□ -1.36
RFA1YAR007C RSC1P53236 928 aa6.56□□□□□ -1.36
RFA1YAR007C HEF3P53978 1044 aaKnown RBP6.56□□□□□ -1.36
RFA1YAR007C TAF8Q03750 510 aa6.56□□□□□ -1.36
RFA1YAR007C YDR344CQ05510 147 aa6.56□□□□□ -1.36
RFA1YAR007C SRS2P12954 1174 aa6.56□□□□□ -1.36
RFA1YAR007C CHL1P22516 861 aaPredicted RBP6.56□□□□□ -1.36
RFA1YAR007C CSE4P36012 229 aa6.56□□□□□ -1.36
RFA1YAR007C PRE3P38624 215 aa6.56□□□□□ -1.36
RFA1YAR007C LCD1Q04377 747 aa6.56□□□□□ -1.36
RFA1YAR007C HAP5Q02516 242 aa6.55□□□□□ -1.36
RFA1YAR007C DNF3Q12674 1656 aa6.55□□□□□ -1.36
RFA1YAR007C YML133CQ03099 1374 aa6.55□□□□□ -1.36
RFA1YAR007C YLL067CQ07888 1374 aa6.55□□□□□ -1.36
RFA1YAR007C YLL066CQ99208 1374 aa6.55□□□□□ -1.36
RFA1YAR007C PRD1P25375 712 aa6.54□□□□□ -1.36
RFA1YAR007C MET5P47169 1442 aa6.54□□□□□ -1.36
RFA1YAR007C RAD26P40352 1085 aa6.53□□□□□ -1.36
RFA1YAR007C COG8Q04632 607 aa6.53□□□□□ -1.36
RFA1YAR007C RKM3P38222 552 aa6.53□□□□□ -1.36
RFA1YAR007C MCM2P29469 868 aa6.52□□□□□ -1.37
RFA1YAR007C MID1P41821 548 aa6.52□□□□□ -1.37
RFA1YAR007C MDG1P53885 366 aa6.52□□□□□ -1.37
RFA1YAR007C RTT109Q07794 436 aa6.52□□□□□ -1.37
RFA1YAR007C SIR4P11978 1358 aa6.52□□□□□ -1.37
RFA1YAR007C RAD9P14737 1309 aa6.52□□□□□ -1.37
RFA1YAR007C PIL1P53252 339 aaKnown RBP6.51□□□□□ -1.37
RFA1YAR007C MAK21Q12176 1025 aaKnown RBP6.51□□□□□ -1.37
RFA1YAR007C ROM2P51862 1356 aaKnown RBP6.51□□□□□ -1.37
RFA1YAR007C TPM2P40414 161 aa6.51□□□□□ -1.37
RFA1YAR007C NUP145P49687 1317 aa6.5□□□□□ -1.37
RFA1YAR007C BCK1Q01389 1478 aa6.5□□□□□ -1.37
RFA1YAR007C YRF1-4O13559 1382 aa6.5□□□□□ -1.37
RFA1YAR007C KAR2P16474 682 aaKnown RBP6.5□□□□□ -1.37
RFA1YAR007C ILV3P39522 585 aaKnown RBP6.5□□□□□ -1.37
RFA1YAR007C RRT14P40470 206 aa6.5□□□□□ -1.37
RFA1YAR007C YGL081WP53156 320 aa6.5□□□□□ -1.37
RFA1YAR007C NOP53Q12080 455 aaKnown RBP6.5□□□□□ -1.37
RFA1YAR007C MPH3P0CE00 602 aa6.49□□□□□ -1.37
RFA1YAR007C DLD1P32891 587 aa6.49□□□□□ -1.37
RFA1YAR007C BCK2P33306 851 aa6.49□□□□□ -1.37
RFA1YAR007C RPN1P38764 993 aaKnown RBP6.49□□□□□ -1.37
RFA1YAR007C NPA3P47122 385 aa6.49□□□□□ -1.37
RFA1YAR007C ESC2Q06340 456 aa6.49□□□□□ -1.37
RFA1YAR007C PSK1P31374 1356 aa6.49□□□□□ -1.37
RFA1YAR007C CIR1P42940 261 aa6.49□□□□□ -1.37
RFA1YAR007C AI4P03878 556 aa6.48□□□□□ -1.37
RFA1YAR007C RVS167P39743 482 aaKnown RBP6.48□□□□□ -1.37
RFA1YAR007C SMC3P47037 1230 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms