RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	SYH1	Q02875	849 aa	Known RBP	7.79	□□□□□ -1.16
ECM1	YAL059W	ENO2	P00925	437 aa	Known RBP	7.78	□□□□□ -1.16
ECM1	YAL059W	TIF1	P10081	395 aa	Known RBP	7.78	□□□□□ -1.16
ECM1	YAL059W	IXR1	P33417	597 aa		7.78	□□□□□ -1.16
ECM1	YAL059W	HED1	Q03937	162 aa		7.78	□□□□□ -1.16
ECM1	YAL059W	YPR084W	Q06821	456 aa		7.78	□□□□□ -1.16
ECM1	YAL059W	GUT2	P32191	649 aa		7.76	□□□□□ -1.17
ECM1	YAL059W	AIR1	P40507	360 aa	Known RBP	7.76	□□□□□ -1.17
ECM1	YAL059W	ISF1	P32488	338 aa		7.75	□□□□□ -1.17
ECM1	YAL059W	ITT1	Q04638	464 aa		7.75	□□□□□ -1.17
ECM1	YAL059W	RIM21	P48565	533 aa		7.74	□□□□□ -1.17
ECM1	YAL059W	FRA1	Q07825	749 aa		7.74	□□□□□ -1.17
ECM1	YAL059W	EMP47	P43555	445 aa		7.73	□□□□□ -1.17
ECM1	YAL059W	STE20	Q03497	939 aa	Known RBP	7.73	□□□□□ -1.17
ECM1	YAL059W	CDC4	P07834	779 aa		7.72	□□□□□ -1.17
ECM1	YAL059W	RTG2	P32608	588 aa	Known RBP	7.72	□□□□□ -1.17
ECM1	YAL059W	YPP1	P46951	817 aa		7.72	□□□□□ -1.17
ECM1	YAL059W	SRC1	Q03707	834 aa		7.72	□□□□□ -1.17
ECM1	YAL059W	YPR204W	Q08995	1032 aa		7.72	□□□□□ -1.17
ECM1	YAL059W	MET32	Q12041	191 aa		7.72	□□□□□ -1.17
ECM1	YAL059W	RLF2	Q12495	606 aa		7.71	□□□□□ -1.18
ECM1	YAL059W	ENO1	P00924	437 aa	Known RBP	7.69	□□□□□ -1.18
ECM1	YAL059W	APP1	P53933	587 aa		7.69	□□□□□ -1.18
ECM1	YAL059W	TRK1	P12685	1235 aa		7.68	□□□□□ -1.18
ECM1	YAL059W	MRT4	P33201	236 aa	Known RBP	7.68	□□□□□ -1.18
ECM1	YAL059W	MRX12	P47084	519 aa		7.68	□□□□□ -1.18
ECM1	YAL059W	EMW1	P42842	904 aa	Known RBP	7.67	□□□□□ -1.18
ECM1	YAL059W	MRX10	Q05648	414 aa		7.67	□□□□□ -1.18
ECM1	YAL059W	AIM44	Q99299	758 aa		7.66	□□□□□ -1.18
ECM1	YAL059W	RDS2	P19541	446 aa	Known RBP	7.65	□□□□□ -1.18
ECM1	YAL059W	APL6	P46682	809 aa		7.65	□□□□□ -1.18
ECM1	YAL059W	AFT1	P22149	690 aa		7.63	□□□□□ -1.19
ECM1	YAL059W	ASH1	P34233	588 aa		7.63	□□□□□ -1.19
ECM1	YAL059W	ATG3	P40344	310 aa		7.63	□□□□□ -1.19
ECM1	YAL059W	HST3	P53687	447 aa		7.63	□□□□□ -1.19
ECM1	YAL059W	MKS1	P34072	584 aa		7.61	□□□□□ -1.19
ECM1	YAL059W	YBL086C	P38177	466 aa		7.61	□□□□□ -1.19
ECM1	YAL059W	SOH1	P38633	127 aa		7.61	□□□□□ -1.19
ECM1	YAL059W	ATG20	Q07528	640 aa		7.61	□□□□□ -1.19
ECM1	YAL059W	ENV9	Q08651	330 aa		7.61	□□□□□ -1.19
ECM1	YAL059W	ISR1	Q06098	443 aa	Known RBP	7.6	□□□□□ -1.19
ECM1	YAL059W	TTI1	P36097	1038 aa		7.59	□□□□□ -1.19
ECM1	YAL059W	MSB3	P48566	633 aa	Predicted RBP	7.59	□□□□□ -1.19
ECM1	YAL059W	UTP13	Q05946	817 aa	Known RBP	7.59	□□□□□ -1.19
ECM1	YAL059W	UGA3	P26370	528 aa		7.58	□□□□□ -1.2
ECM1	YAL059W	CPS1	P27614	576 aa		7.58	□□□□□ -1.2
ECM1	YAL059W	FBP26	P32604	452 aa		7.58	□□□□□ -1.2
ECM1	YAL059W	PEP12	P32854	288 aa		7.58	□□□□□ -1.2
ECM1	YAL059W	SIS2	P36024	562 aa		7.58	□□□□□ -1.2
ECM1	YAL059W	HAL5	P38970	855 aa	Known RBP	7.58	□□□□□ -1.2
ECM1	YAL059W	DFG5	Q05031	458 aa		7.57	□□□□□ -1.2
ECM1	YAL059W	RTT106	P40161	455 aa		7.56	□□□□□ -1.2
ECM1	YAL059W	BRE2	P43132	505 aa		7.56	□□□□□ -1.2
ECM1	YAL059W	YJR115W	P47152	169 aa		7.54	□□□□□ -1.2
ECM1	YAL059W	ISU1	Q03020	165 aa		7.54	□□□□□ -1.2
ECM1	YAL059W	NAP1	P25293	417 aa	Known RBP	7.53	□□□□□ -1.2
ECM1	YAL059W	KTR7	P40504	517 aa		7.53	□□□□□ -1.2
ECM1	YAL059W	STE6	P12866	1290 aa		7.52	□□□□□ -1.21
ECM1	YAL059W	MIP1	P15801	1254 aa		7.52	□□□□□ -1.21
ECM1	YAL059W	SSA4	P22202	642 aa	Known RBP	7.51	□□□□□ -1.21
ECM1	YAL059W	UTR2	P32623	467 aa		7.51	□□□□□ -1.21
ECM1	YAL059W	PTK2	P47116	818 aa	Known RBP	7.51	□□□□□ -1.21
ECM1	YAL059W	BDS1	Q08347	646 aa		7.51	□□□□□ -1.21
ECM1	YAL059W	TGL4	P36165	910 aa		7.5	□□□□□ -1.21
ECM1	YAL059W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.5	□□□□□ -1.21	not detected
ECM1	YAL059W	SPT2	P06843	333 aa	Predicted RBP	7.49	□□□□□ -1.21
ECM1	YAL059W	AAD14	P42884	376 aa		7.49	□□□□□ -1.21
ECM1	YAL059W	GCR2	Q01722	534 aa		7.49	□□□□□ -1.21
ECM1	YAL059W	HDA3	Q06623	655 aa		7.49	□□□□□ -1.21
ECM1	YAL059W	SRF1	Q12516	437 aa		7.49	□□□□□ -1.21
ECM1	YAL059W	ARG82	P07250	355 aa		7.48	□□□□□ -1.21
ECM1	YAL059W	RPP2B	P02400	110 aa	Known RBP	7.47	□□□□□ -1.21
ECM1	YAL059W	AIM9	P40053	627 aa	Known RBP	7.47	□□□□□ -1.21
ECM1	YAL059W	WTM2	Q12206	467 aa		7.47	□□□□□ -1.21
ECM1	YAL059W	DAT1	P13483	248 aa	Known RBP	7.46	□□□□□ -1.22
ECM1	YAL059W	PUP1	P25043	261 aa		7.46	□□□□□ -1.22
ECM1	YAL059W	PHO87	P25360	923 aa		7.46	□□□□□ -1.22
ECM1	YAL059W	SUB2	Q07478	446 aa	Known RBP	7.46	□□□□□ -1.22
ECM1	YAL059W	GAL2	P13181	574 aa		7.45	□□□□□ -1.22
ECM1	YAL059W	PDI1	P17967	522 aa	Known RBP	7.44	□□□□□ -1.22
ECM1	YAL059W	TBS1	P38114	1094 aa		7.44	□□□□□ -1.22
ECM1	YAL059W	DLD3	P39976	496 aa	Known RBP	7.44	□□□□□ -1.22
ECM1	YAL059W	SLX8	P40072	274 aa		7.44	□□□□□ -1.22
ECM1	YAL059W	YFL034W	P43564	1073 aa		7.44	□□□□□ -1.22
ECM1	YAL059W	ECM23	Q02710	187 aa		7.44	□□□□□ -1.22
ECM1	YAL059W	IOC4	Q04213	475 aa		7.44	□□□□□ -1.22
ECM1	YAL059W	TSC13	Q99190	310 aa		7.44	□□□□□ -1.22
ECM1	YAL059W	ACS2	P52910	683 aa	Known RBP	7.43	□□□□□ -1.22
ECM1	YAL059W	NOB1	Q08444	459 aa	Known RBP	7.43	□□□□□ -1.22
ECM1	YAL059W	DLD1	P32891	587 aa		7.42	□□□□□ -1.22
ECM1	YAL059W	NUP85	P46673	744 aa		7.42	□□□□□ -1.22
ECM1	YAL059W	YML083C	Q04526	418 aa		7.42	□□□□□ -1.22
ECM1	YAL059W	HAP4	P14064	554 aa		7.41	□□□□□ -1.22
ECM1	YAL059W	SWI5	P08153	709 aa		7.4	□□□□□ -1.22
ECM1	YAL059W	RPS6A	P0CX37	236 aa	Known RBP	7.4	□□□□□ -1.22
ECM1	YAL059W	RPS6B	P0CX38	236 aa	Predicted RBP	7.4	□□□□□ -1.22
ECM1	YAL059W	NTH2	P35172	780 aa		7.4	□□□□□ -1.22
ECM1	YAL059W	UBX7	P38349	436 aa		7.39	□□□□□ -1.23
ECM1	YAL059W	UTP7	P40055	554 aa	Known RBP	7.39	□□□□□ -1.23
ECM1	YAL059W	YJR098C	P47139	656 aa		7.39	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 55.3 ms