RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 BRD4O60885 1362 aaPredicted RBP20.54■□□□□ 0.88
LINC02228-204ENST00000642115 NLRP13Q86W25 1043 aa20.54■□□□□ 0.88
LINC02228-204ENST00000642115 ARID4BQ4LE39 1312 aaPredicted RBP20.53■□□□□ 0.88
LINC02228-204ENST00000642115 WDR62O43379 1518 aa20.52■□□□□ 0.87
LINC02228-204ENST00000642115 LRPPRCP42704 1394 aaKnown RBP20.51■□□□□ 0.87
LINC02228-204ENST00000642115 C20orf194Q5TEA3 1177 aa20.5■□□□□ 0.87
LINC02228-204ENST00000642115 NBPF1Q3BBV0 1214 aa20.5■□□□□ 0.87
LINC02228-204ENST00000642115 KTN1Q86UP2 1357 aaKnown RBP20.5■□□□□ 0.87
LINC02228-204ENST00000642115 ANKRD30AQ9BXX3 1397 aa20.49■□□□□ 0.87
LINC02228-204ENST00000642115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.87
LINC02228-204ENST00000642115 ANKRD50Q9ULJ7 1429 aa20.48■□□□□ 0.87
LINC02228-204ENST00000642115 DNMT1P26358 1616 aaKnown RBP20.48■□□□□ 0.87
LINC02228-204ENST00000642115 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
LINC02228-204ENST00000642115 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
LINC02228-204ENST00000642115 POGKQ9P215 609 aa20.47■□□□□ 0.87
LINC02228-204ENST00000642115 CAMSAP2Q08AD1 1489 aa20.46■□□□□ 0.87
LINC02228-204ENST00000642115 HNRNPMP52272 730 aaKnown RBP eCLIP20.46■□□□□ 0.87
LINC02228-204ENST00000642115 NUP153P49790 1475 aaKnown RBP20.46■□□□□ 0.87
LINC02228-204ENST00000642115 MBD5Q9P267 1494 aa20.46■□□□□ 0.87
LINC02228-204ENST00000642115 ZNF608Q9ULD9 1512 aaPredicted RBP20.45■□□□□ 0.86
LINC02228-204ENST00000642115 PDE3BQ13370 1112 aa20.44■□□□□ 0.86
LINC02228-204ENST00000642115 RGS3P49796 1198 aa20.44■□□□□ 0.86
LINC02228-204ENST00000642115 KDM5CP41229 1560 aa20.44■□□□□ 0.86
LINC02228-204ENST00000642115 NAP1L5Q96NT1 182 aaPredicted RBP20.43■□□□□ 0.86
LINC02228-204ENST00000642115 PANK3Q9H999 370 aa20.43■□□□□ 0.86
LINC02228-204ENST00000642115 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
LINC02228-204ENST00000642115 HSP90AA2PQ14568 343 aaPredicted RBP20.43■□□□□ 0.86
LINC02228-204ENST00000642115 MRC2Q9UBG0 1479 aa20.42■□□□□ 0.86
LINC02228-204ENST00000642115 POLR1AO95602 1720 aaPredicted RBP20.41■□□□□ 0.86
LINC02228-204ENST00000642115 C8orf34Q49A92 452 aa20.41■□□□□ 0.86
LINC02228-204ENST00000642115 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
LINC02228-204ENST00000642115 PLEKHD1A6NEE1 506 aa20.39■□□□□ 0.85
LINC02228-204ENST00000642115 FAM161AQ3B820 660 aa20.39■□□□□ 0.85
LINC02228-204ENST00000642115 RALGAPBQ86X10 1494 aa20.39■□□□□ 0.85
LINC02228-204ENST00000642115 GPATCH8Q9UKJ3 1502 aaKnown RBP20.38■□□□□ 0.85
LINC02228-204ENST00000642115 TROQ12816 1431 aaPredicted RBP20.38■□□□□ 0.85
LINC02228-204ENST00000642115 ADAMTS8Q9UP79 889 aa20.38■□□□□ 0.85
LINC02228-204ENST00000642115 PLB1Q6P1J6 1458 aa20.38■□□□□ 0.85
LINC02228-204ENST00000642115 KIF14Q15058 1648 aa20.37■□□□□ 0.85
LINC02228-204ENST00000642115 PER1O15534 1290 aaPredicted RBP20.37■□□□□ 0.85
LINC02228-204ENST00000642115 HSP90AA1P07900 732 aaKnown RBP20.36■□□□□ 0.85
LINC02228-204ENST00000642115 CHMP7Q8WUX9 453 aaPredicted RBP20.36■□□□□ 0.85
LINC02228-204ENST00000642115 ARXQ96QS3 562 aa20.36■□□□□ 0.85
LINC02228-204ENST00000642115 RRP9O43818 475 aaKnown RBP20.35■□□□□ 0.85
LINC02228-204ENST00000642115 PNNQ9H307 717 aaKnown RBP20.35■□□□□ 0.85
LINC02228-204ENST00000642115 KDM2BQ8NHM5 1336 aa20.34■□□□□ 0.85
LINC02228-204ENST00000642115 DISP1Q96F81 1524 aa20.34■□□□□ 0.85
LINC02228-204ENST00000642115 KIAA0586Q9BVV6 1533 aa20.34■□□□□ 0.85
LINC02228-204ENST00000642115 PARD3Q8TEW0 1356 aa20.34■□□□□ 0.85
LINC02228-204ENST00000642115 UHRF1BP1Q6BDS2 1440 aa20.33■□□□□ 0.85
LINC02228-204ENST00000642115 WDR43Q15061 677 aaKnown RBP eCLIP20.33■□□□□ 0.84
LINC02228-204ENST00000642115 L1TD1Q5T7N2 865 aaKnown RBP20.32■□□□□ 0.84
LINC02228-204ENST00000642115 C9orf84Q5VXU9 1444 aa20.31■□□□□ 0.84
LINC02228-204ENST00000642115 PLEKHG5O94827 1062 aa20.31■□□□□ 0.84
LINC02228-204ENST00000642115 CCDC146Q8IYE0 955 aa20.3■□□□□ 0.84
LINC02228-204ENST00000642115 DISP3Q9P2K9 1392 aa20.3■□□□□ 0.84
LINC02228-204ENST00000642115 PODXL2Q9NZ53 605 aa20.29■□□□□ 0.84
LINC02228-204ENST00000642115 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
LINC02228-204ENST00000642115 RAPGEF6Q8TEU7 1601 aa20.28■□□□□ 0.84
LINC02228-204ENST00000642115 CLCN1P35523 988 aa20.28■□□□□ 0.84
LINC02228-204ENST00000642115 CENPQQ7L2Z9 268 aaPredicted RBP20.28■□□□□ 0.84
LINC02228-204ENST00000642115 XRCC6P12956 609 aaKnown RBP eCLIP20.27■□□□□ 0.84
LINC02228-204ENST00000642115 TMF1P82094 1093 aa20.27■□□□□ 0.83
LINC02228-204ENST00000642115 PBRM1Q86U86 1689 aa20.27■□□□□ 0.83
LINC02228-204ENST00000642115 KIAA0556O60303 1618 aa20.26■□□□□ 0.83
LINC02228-204ENST00000642115 CCDC144AA2RUR9 1427 aa20.25■□□□□ 0.83
LINC02228-204ENST00000642115 SLKQ9H2G2 1235 aaPredicted RBP20.25■□□□□ 0.83
LINC02228-204ENST00000642115 KNSTRNQ9Y448 316 aa20.25■□□□□ 0.83
LINC02228-204ENST00000642115 JPH4Q96JJ6 628 aa20.25■□□□□ 0.83
LINC02228-204ENST00000642115 PANK2Q9BZ23 570 aa20.25■□□□□ 0.83
LINC02228-204ENST00000642115 TESK2Q96S53 571 aa20.24■□□□□ 0.83
LINC02228-204ENST00000642115 GOLGA2Q08379 1002 aa20.22■□□□□ 0.83
LINC02228-204ENST00000642115 ADGRL2O95490 1459 aa20.22■□□□□ 0.83
LINC02228-204ENST00000642115 DUSP27Q5VZP5 1158 aa20.22■□□□□ 0.83
LINC02228-204ENST00000642115 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
LINC02228-204ENST00000642115 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
LINC02228-204ENST00000642115 IFT140Q96RY7 1462 aa20.2■□□□□ 0.82
LINC02228-204ENST00000642115 USP19O94966 1318 aa20.2■□□□□ 0.82
LINC02228-204ENST00000642115 BCAR3O75815 825 aa20.19■□□□□ 0.82
LINC02228-204ENST00000642115 PPP2R1AP30153 589 aa20.19■□□□□ 0.82
LINC02228-204ENST00000642115 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
LINC02228-204ENST00000642115 ARHGEF12Q9NZN5 1544 aa20.18■□□□□ 0.82
LINC02228-204ENST00000642115 GOLGA6L3A6NEY3 463 aa20.18■□□□□ 0.82
LINC02228-204ENST00000642115 APAF1O14727 1248 aa20.16■□□□□ 0.82
LINC02228-204ENST00000642115 GZF1Q9H116 711 aaPredicted RBP20.16■□□□□ 0.82
LINC02228-204ENST00000642115 ADGBQ8N7X0 1667 aa20.16■□□□□ 0.82
LINC02228-204ENST00000642115 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
LINC02228-204ENST00000642115 ERBINQ96RT1 1412 aa20.16■□□□□ 0.82
LINC02228-204ENST00000642115 CANXP27824 592 aaKnown RBP20.16■□□□□ 0.82
LINC02228-204ENST00000642115 FSD2A1L4K1 749 aa20.15■□□□□ 0.82
LINC02228-204ENST00000642115 SEC24BO95487 1268 aa20.15■□□□□ 0.82
LINC02228-204ENST00000642115 BLMP54132 1417 aaPredicted RBP20.14■□□□□ 0.81
LINC02228-204ENST00000642115 GRIN2AQ12879 1464 aa20.14■□□□□ 0.81
LINC02228-204ENST00000642115 NEUROD2Q15784 382 aa20.13■□□□□ 0.81
LINC02228-204ENST00000642115 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
LINC02228-204ENST00000642115 ANTXR1Q9H6X2 564 aa20.13■□□□□ 0.81
LINC02228-204ENST00000642115 ITSN2Q9NZM3 1697 aa20.12■□□□□ 0.81
LINC02228-204ENST00000642115 BECN1Q14457 450 aa20.11■□□□□ 0.81
LINC02228-204ENST00000642115 CARMIL2Q6F5E8 1435 aa20.11■□□□□ 0.81
LINC02228-204ENST00000642115 IGHDP01880 384 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms