RNA–Protein interactions for RNA: ENST00000641909.1

MTHFR-218, Transcript of methylenetetrahydrofolate reductase, humanhuman

Gene MTHFR, Length 2,254 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-218ENST00000641909 DCAF11Q8TEB1 546 aa20.48■□□□□ 0.87
MTHFR-218ENST00000641909 SMG6Q86US8 1419 aaKnown RBP20.47■□□□□ 0.87
MTHFR-218ENST00000641909 ST20-MTHFSA0A0A6YYL1 179 aa20.47■□□□□ 0.87
MTHFR-218ENST00000641909 B4GALNT3Q6L9W6 998 aa20.46■□□□□ 0.87
MTHFR-218ENST00000641909 SYCP2Q9BX26 1530 aa20.45■□□□□ 0.86
MTHFR-218ENST00000641909 TTC37Q6PGP7 1564 aa20.44■□□□□ 0.86
MTHFR-218ENST00000641909 PNISRQ8TF01 805 aaKnown RBP20.43■□□□□ 0.86
MTHFR-218ENST00000641909 E9PCH4 1651 aa20.43■□□□□ 0.86
MTHFR-218ENST00000641909 NUDCQ9Y266 331 aa20.42■□□□□ 0.86
MTHFR-218ENST00000641909 SENP3-EIF4A1A0A087X0R7 540 aa20.42■□□□□ 0.86
MTHFR-218ENST00000641909 CHD1O14646 1710 aa20.41■□□□□ 0.86
MTHFR-218ENST00000641909 DEKP35659 375 aaKnown RBP20.41■□□□□ 0.86
MTHFR-218ENST00000641909 ARHGAP5Q13017 1502 aa20.41■□□□□ 0.86
MTHFR-218ENST00000641909 TMC1Q8TDI8 760 aa20.41■□□□□ 0.86
MTHFR-218ENST00000641909 TRPM1Q7Z4N2 1603 aa20.4■□□□□ 0.86
MTHFR-218ENST00000641909 CCDC144AA2RUR9 1427 aa20.4■□□□□ 0.86
MTHFR-218ENST00000641909 UNC13BO14795 1591 aa20.4■□□□□ 0.86
MTHFR-218ENST00000641909 RSPH4AQ5TD94 716 aa20.39■□□□□ 0.86
MTHFR-218ENST00000641909 PRAG1Q86YV5 1406 aa20.39■□□□□ 0.86
MTHFR-218ENST00000641909 MAST1Q9Y2H9 1570 aa20.39■□□□□ 0.86
MTHFR-218ENST00000641909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.39■□□□□ 0.85
MTHFR-218ENST00000641909 PLA2R1Q13018 1463 aa20.37■□□□□ 0.85
MTHFR-218ENST00000641909 MYBBP1AQ9BQG0 1328 aaKnown RBP20.35■□□□□ 0.85
MTHFR-218ENST00000641909 LRPPRCP42704 1394 aaKnown RBP20.35■□□□□ 0.85
MTHFR-218ENST00000641909 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
MTHFR-218ENST00000641909 RNF123Q5XPI4 1314 aa20.35■□□□□ 0.85
MTHFR-218ENST00000641909 BRD4O60885 1362 aaPredicted RBP20.35■□□□□ 0.85
MTHFR-218ENST00000641909 RGL3Q3MIN7 710 aa20.34■□□□□ 0.85
MTHFR-218ENST00000641909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.34■□□□□ 0.855e-6■□□□□ 8.4
MTHFR-218ENST00000641909 A2MP01023 1474 aa20.34■□□□□ 0.85
MTHFR-218ENST00000641909 MYO5CQ9NQX4 1742 aa20.33■□□□□ 0.85
MTHFR-218ENST00000641909 KTN1Q86UP2 1357 aaKnown RBP20.33■□□□□ 0.85
MTHFR-218ENST00000641909 PLXNC1O60486 1568 aa20.33■□□□□ 0.85
MTHFR-218ENST00000641909 RALBP1Q15311 655 aa20.33■□□□□ 0.84
MTHFR-218ENST00000641909 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.84
MTHFR-218ENST00000641909 IQGAP3Q86VI3 1631 aa20.32■□□□□ 0.84
MTHFR-218ENST00000641909 PLEKHH2Q8IVE3 1493 aa20.32■□□□□ 0.84
MTHFR-218ENST00000641909 NBPF1Q3BBV0 1214 aa20.32■□□□□ 0.84
MTHFR-218ENST00000641909 ABCC2Q92887 1545 aa20.31■□□□□ 0.84
MTHFR-218ENST00000641909 GPRASP1Q5JY77 1395 aa20.3■□□□□ 0.84
MTHFR-218ENST00000641909 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.84
MTHFR-218ENST00000641909 COL17A1Q9UMD9 1497 aaPredicted RBP20.27■□□□□ 0.84
MTHFR-218ENST00000641909 PARD3Q8TEW0 1356 aa20.27■□□□□ 0.84
MTHFR-218ENST00000641909 LAMC1P11047 1609 aa20.27■□□□□ 0.83
MTHFR-218ENST00000641909 DUOX2Q9NRD8 1548 aa20.26■□□□□ 0.83
MTHFR-218ENST00000641909 MAGI2Q86UL8 1455 aa20.25■□□□□ 0.83
MTHFR-218ENST00000641909 DISP3Q9P2K9 1392 aa20.24■□□□□ 0.83
MTHFR-218ENST00000641909 NLRP13Q86W25 1043 aa20.24■□□□□ 0.83
MTHFR-218ENST00000641909 EIF2AK4Q9P2K8 1649 aaKnown RBP20.23■□□□□ 0.83
MTHFR-218ENST00000641909 TESK2Q96S53 571 aa20.23■□□□□ 0.83
MTHFR-218ENST00000641909 ERBINQ96RT1 1412 aa20.22■□□□□ 0.83
MTHFR-218ENST00000641909 PER1O15534 1290 aaPredicted RBP20.22■□□□□ 0.83
MTHFR-218ENST00000641909 CCDC136Q96JN2 1154 aa20.22■□□□□ 0.83
MTHFR-218ENST00000641909 ATP10AO60312 1499 aa20.22■□□□□ 0.83
MTHFR-218ENST00000641909 NOP58Q9Y2X3 529 aaKnown RBP20.2■□□□□ 0.82
MTHFR-218ENST00000641909 PLCH2O75038 1416 aa20.19■□□□□ 0.82
MTHFR-218ENST00000641909 ZCCHC11Q5TAX3 1644 aaKnown RBP20.19■□□□□ 0.82
MTHFR-218ENST00000641909 SALL2Q9Y467 1007 aaPredicted RBP20.18■□□□□ 0.82
MTHFR-218ENST00000641909 ABCC1P33527 1531 aa20.18■□□□□ 0.82
MTHFR-218ENST00000641909 RNF17Q9BXT8 1623 aaKnown RBP20.17■□□□□ 0.82
MTHFR-218ENST00000641909 CC2D1BQ5T0F9 858 aaKnown RBP20.16■□□□□ 0.82
MTHFR-218ENST00000641909 TRAPPC8Q9Y2L5 1435 aa20.16■□□□□ 0.82
MTHFR-218ENST00000641909 RRP1P56182 461 aaKnown RBP20.15■□□□□ 0.82
MTHFR-218ENST00000641909 PANK3Q9H999 370 aa20.15■□□□□ 0.82
MTHFR-218ENST00000641909 EFCAB2Q5VUJ9 269 aa20.14■□□□□ 0.81
MTHFR-218ENST00000641909 TMF1P82094 1093 aa20.13■□□□□ 0.81
MTHFR-218ENST00000641909 WASHC2CQ9Y4E1 1318 aa20.12■□□□□ 0.81
MTHFR-218ENST00000641909 ANO8Q9HCE9 1232 aaPredicted RBP20.11■□□□□ 0.81
MTHFR-218ENST00000641909 RCAN3Q9UKA8 241 aa20.11■□□□□ 0.81
MTHFR-218ENST00000641909 MADDQ8WXG6 1647 aa20.1■□□□□ 0.81
MTHFR-218ENST00000641909 UHRF1BP1LA0JNW5 1464 aa20.09■□□□□ 0.81
MTHFR-218ENST00000641909 BLMP54132 1417 aaPredicted RBP20.09■□□□□ 0.81
MTHFR-218ENST00000641909 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
MTHFR-218ENST00000641909 CLASP1Q7Z460 1538 aa20.08■□□□□ 0.81
MTHFR-218ENST00000641909 EXOC6Q8TAG9 804 aa20.08■□□□□ 0.81
MTHFR-218ENST00000641909 CDCA7LQ96GN5 454 aa20.08■□□□□ 0.81
MTHFR-218ENST00000641909 ZFYVE16Q7Z3T8 1539 aa20.07■□□□□ 0.8
MTHFR-218ENST00000641909 TRPM2O94759 1503 aa20.06■□□□□ 0.8
MTHFR-218ENST00000641909 IQGAP1P46940 1657 aa20.06■□□□□ 0.8
MTHFR-218ENST00000641909 SPAG9O60271 1321 aaKnown RBP20.06■□□□□ 0.8
MTHFR-218ENST00000641909 NBR1Q14596 966 aa20.05■□□□□ 0.8
MTHFR-218ENST00000641909 ZMYM4Q5VZL5 1548 aa20.05■□□□□ 0.8
MTHFR-218ENST00000641909 AFAP1Q8N556 730 aa20.05■□□□□ 0.8
MTHFR-218ENST00000641909 WDR7Q9Y4E6 1490 aa20.05■□□□□ 0.8
MTHFR-218ENST00000641909 SPHKAPQ2M3C7 1700 aa20.05■□□□□ 0.8
MTHFR-218ENST00000641909 INSRP06213 1382 aa20.04■□□□□ 0.8
MTHFR-218ENST00000641909 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
MTHFR-218ENST00000641909 CEP152O94986 1710 aa20.04■□□□□ 0.8
MTHFR-218ENST00000641909 CLTCL1P53675 1640 aa20.03■□□□□ 0.8
MTHFR-218ENST00000641909 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.8
MTHFR-218ENST00000641909 DEPDC5O75140 1603 aa20.02■□□□□ 0.79
MTHFR-218ENST00000641909 PTPRTO14522 1441 aa20.01■□□□□ 0.79
MTHFR-218ENST00000641909 ARAP3Q8WWN8 1544 aa20■□□□□ 0.79
MTHFR-218ENST00000641909 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
MTHFR-218ENST00000641909 SCAF11Q99590 1463 aaKnown RBP19.98■□□□□ 0.79
MTHFR-218ENST00000641909 TET3O43151 1660 aa19.98■□□□□ 0.79
MTHFR-218ENST00000641909 ANP32AP39687 249 aaKnown RBP19.97■□□□□ 0.79
MTHFR-218ENST00000641909 SYNMO15061 1565 aa19.97■□□□□ 0.79
MTHFR-218ENST00000641909 SCAPERQ9BY12 1400 aa19.97■□□□□ 0.79
MTHFR-218ENST00000641909 IPO9Q96P70 1041 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms