RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 KDM5DQ9BY66 1539 aa25.78■■□□□ 1.72
PHGDH-214ENST00000641314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.78■■□□□ 1.725e-16■■□□□ 13.6
PHGDH-214ENST00000641314 EIF2AK4Q9P2K8 1649 aaKnown RBP25.77■■□□□ 1.72
PHGDH-214ENST00000641314 MAGI2Q86UL8 1455 aa25.75■■□□□ 1.71
PHGDH-214ENST00000641314 KIF3BO15066 747 aa25.74■■□□□ 1.71
PHGDH-214ENST00000641314 FAM135AQ9P2D6 1515 aa25.71■■□□□ 1.71
PHGDH-214ENST00000641314 DEPDC5O75140 1603 aa25.71■■□□□ 1.71
PHGDH-214ENST00000641314 FOXD1Q16676 465 aa25.7■■□□□ 1.71
PHGDH-214ENST00000641314 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.7
PHGDH-214ENST00000641314 PKD2Q13563 968 aa25.68■■□□□ 1.7
PHGDH-214ENST00000641314 ATP10AO60312 1499 aa25.67■■□□□ 1.7
PHGDH-214ENST00000641314 SIN3AQ96ST3 1273 aa25.66■■□□□ 1.7
PHGDH-214ENST00000641314 ARHGEF40Q8TER5 1519 aa25.66■■□□□ 1.7
PHGDH-214ENST00000641314 RNF17Q9BXT8 1623 aaKnown RBP25.65■■□□□ 1.7
PHGDH-214ENST00000641314 NEUROD1Q13562 356 aa25.65■■□□□ 1.7
PHGDH-214ENST00000641314 KANK1Q14678 1352 aa25.64■■□□□ 1.7
PHGDH-214ENST00000641314 MROH1Q8NDA8 1641 aa25.64■■□□□ 1.7
PHGDH-214ENST00000641314 BCORL1Q5H9F3 1711 aa25.64■■□□□ 1.69
PHGDH-214ENST00000641314 PRDM15P57071 1507 aaPredicted RBP25.64■■□□□ 1.69
PHGDH-214ENST00000641314 GGT6Q6P531 493 aa25.6■■□□□ 1.69
PHGDH-214ENST00000641314 REREQ9P2R6 1566 aa25.6■■□□□ 1.69
PHGDH-214ENST00000641314 VWDEQ8N2E2 1590 aa25.59■■□□□ 1.69
PHGDH-214ENST00000641314 ANKRD30BQ9BXX2 1392 aa25.59■■□□□ 1.69
PHGDH-214ENST00000641314 CEP152O94986 1710 aa25.55■■□□□ 1.68
PHGDH-214ENST00000641314 TET3O43151 1660 aa25.55■■□□□ 1.68
PHGDH-214ENST00000641314 SIGLEC1Q9BZZ2 1709 aa25.53■■□□□ 1.68
PHGDH-214ENST00000641314 AGLP35573 1532 aa25.53■■□□□ 1.68
PHGDH-214ENST00000641314 E9PCH4 1651 aa25.51■■□□□ 1.67
PHGDH-214ENST00000641314 LMTK2Q8IWU2 1503 aa25.49■■□□□ 1.67
PHGDH-214ENST00000641314 WASHC2CQ9Y4E1 1318 aa25.48■■□□□ 1.67
PHGDH-214ENST00000641314 TONSLQ96HA7 1378 aa25.48■■□□□ 1.67
PHGDH-214ENST00000641314 ABCC3O15438 1527 aa25.48■■□□□ 1.67
PHGDH-214ENST00000641314 EFCAB6Q5THR3 1501 aa25.47■■□□□ 1.67
PHGDH-214ENST00000641314 RPRD2Q5VT52 1461 aaKnown RBP25.46■■□□□ 1.67
PHGDH-214ENST00000641314 ZC3H13Q5T200 1668 aaKnown RBP25.44■■□□□ 1.66
PHGDH-214ENST00000641314 MLECQ14165 292 aa25.44■■□□□ 1.66
PHGDH-214ENST00000641314 ARID4BQ4LE39 1312 aaPredicted RBP25.43■■□□□ 1.66
PHGDH-214ENST00000641314 TIMELESSQ9UNS1 1208 aa25.43■■□□□ 1.66
PHGDH-214ENST00000641314 CAMSAP1Q5T5Y3 1602 aa25.43■■□□□ 1.66
PHGDH-214ENST00000641314 PLA2R1Q13018 1463 aa25.42■■□□□ 1.66
PHGDH-214ENST00000641314 SPHKAPQ2M3C7 1700 aa25.41■■□□□ 1.66
PHGDH-214ENST00000641314 CCDC144AA2RUR9 1427 aa25.39■■□□□ 1.66
PHGDH-214ENST00000641314 TRPM2O94759 1503 aa25.36■■□□□ 1.65
PHGDH-214ENST00000641314 NPATQ14207 1427 aa25.36■■□□□ 1.65
PHGDH-214ENST00000641314 PPP6R1Q9UPN7 881 aa25.35■■□□□ 1.65
PHGDH-214ENST00000641314 PTPRTO14522 1441 aa25.35■■□□□ 1.65
PHGDH-214ENST00000641314 CLTCQ00610 1675 aaKnown RBP25.34■■□□□ 1.65
PHGDH-214ENST00000641314 CFAP65Q6ZU64 1925 aaKnown RBP25.32■■□□□ 1.64
PHGDH-214ENST00000641314 L3MBTL2Q969R5 705 aa25.31■■□□□ 1.64
PHGDH-214ENST00000641314 ARHGAP31Q2M1Z3 1444 aa25.31■■□□□ 1.64
PHGDH-214ENST00000641314 PPP1R15AO75807 674 aaPredicted RBP25.3■■□□□ 1.64
PHGDH-214ENST00000641314 ESF1Q9H501 851 aaKnown RBP25.3■■□□□ 1.64
PHGDH-214ENST00000641314 CLTCL1P53675 1640 aa25.29■■□□□ 1.64
PHGDH-214ENST00000641314 UGGT1Q9NYU2 1555 aa25.26■■□□□ 1.63
PHGDH-214ENST00000641314 CNTLNQ9NXG0 1405 aa25.25■■□□□ 1.63
PHGDH-214ENST00000641314 NOS1P29475 1434 aa25.23■■□□□ 1.63
PHGDH-214ENST00000641314 PREX1Q8TCU6 1659 aa25.23■■□□□ 1.63
PHGDH-214ENST00000641314 RGL3Q3MIN7 710 aa25.22■■□□□ 1.63
PHGDH-214ENST00000641314 SYNMO15061 1565 aa25.2■■□□□ 1.63
PHGDH-214ENST00000641314 KIF1BO60333 1816 aa25.18■■□□□ 1.62
PHGDH-214ENST00000641314 ERVK-7P63135 1459 aa25.18■■□□□ 1.62
PHGDH-214ENST00000641314 SPATA31E1Q6ZUB1 1445 aa25.18■■□□□ 1.62
PHGDH-214ENST00000641314 FBXO31Q5XUX0 539 aaPredicted RBP25.18■■□□□ 1.62
PHGDH-214ENST00000641314 FER1L4A9Z1Z3 1794 aa25.17■■□□□ 1.62
PHGDH-214ENST00000641314 ZMYM3Q14202 1370 aa25.17■■□□□ 1.62
PHGDH-214ENST00000641314 DCAF11Q8TEB1 546 aa25.16■■□□□ 1.62
PHGDH-214ENST00000641314 MROH2AA6NES4 1674 aa25.15■■□□□ 1.62
PHGDH-214ENST00000641314 KDM2AQ9Y2K7 1162 aa25.15■■□□□ 1.62
PHGDH-214ENST00000641314 PIK3C2BO00750 1634 aa25.14■■□□□ 1.62
PHGDH-214ENST00000641314 CHGAP10645 457 aaKnown RBP25.14■■□□□ 1.61
PHGDH-214ENST00000641314 ZNF326Q5BKZ1 582 aaKnown RBP25.14■■□□□ 1.61
PHGDH-214ENST00000641314 SPATA31D1Q6ZQQ2 1576 aa25.12■■□□□ 1.61
PHGDH-214ENST00000641314 NBPF8Q3BBV2 869 aa25.11■■□□□ 1.61
PHGDH-214ENST00000641314 NEURL4Q96JN8 1562 aa25.1■■□□□ 1.61
PHGDH-214ENST00000641314 ADGRB3O60242 1522 aa25.1■■□□□ 1.61
PHGDH-214ENST00000641314 SLC52A1Q9NWF4 448 aa25.1■■□□□ 1.61
PHGDH-214ENST00000641314 IDI1Q13907 227 aa25.08■■□□□ 1.61
PHGDH-214ENST00000641314 MADDQ8WXG6 1647 aa25.08■■□□□ 1.6
PHGDH-214ENST00000641314 UHRF1BP1Q6BDS2 1440 aa25.06■■□□□ 1.6
PHGDH-214ENST00000641314 C3P01024 1663 aa25.06■■□□□ 1.6
PHGDH-214ENST00000641314 CEBPAP49715 358 aaPredicted RBP25.05■■□□□ 1.6
PHGDH-214ENST00000641314 PLPPR3Q6T4P5 718 aa25.05■■□□□ 1.6
PHGDH-214ENST00000641314 RIMS1Q86UR5 1692 aaKnown RBP25.04■■□□□ 1.6
PHGDH-214ENST00000641314 ADAMTSL3P82987 1691 aa25.03■■□□□ 1.6
PHGDH-214ENST00000641314 TNRQ92752 1358 aa25.03■■□□□ 1.6
PHGDH-214ENST00000641314 PRAG1Q86YV5 1406 aa25.02■■□□□ 1.6
PHGDH-214ENST00000641314 MYO5BQ9ULV0 1848 aa25■■□□□ 1.59
PHGDH-214ENST00000641314 TMEM131LA2VDJ0 1609 aa25■■□□□ 1.59
PHGDH-214ENST00000641314 IFT172Q9UG01 1749 aa25■■□□□ 1.59
PHGDH-214ENST00000641314 ZNF316A6NFI3 1004 aaPredicted RBP25■■□□□ 1.59
PHGDH-214ENST00000641314 STAG3Q9UJ98 1225 aa24.98■■□□□ 1.59
PHGDH-214ENST00000641314 PPLO60437 1756 aa24.97■■□□□ 1.59
PHGDH-214ENST00000641314 RALGAPBQ86X10 1494 aa24.97■■□□□ 1.59
PHGDH-214ENST00000641314 STAC3Q96MF2 364 aa24.96■■□□□ 1.59
PHGDH-214ENST00000641314 MYOM2P54296 1465 aa24.95■■□□□ 1.59
PHGDH-214ENST00000641314 RPGRIP1LQ68CZ1 1315 aa24.95■■□□□ 1.58
PHGDH-214ENST00000641314 TRPM1Q7Z4N2 1603 aa24.95■■□□□ 1.58
PHGDH-214ENST00000641314 NEXMIFQ5QGS0 1516 aa24.92■■□□□ 1.58
PHGDH-214ENST00000641314 ADGRF5Q8IZF2 1346 aa24.91■■□□□ 1.58
PHGDH-214ENST00000641314 A2ML1A8K2U0 1454 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms