RNA–Protein interactions for RNA: ENST00000640824.1

KCNMA1-290, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 4

Gene KCNMA1, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-290ENST00000640824 CLTCQ00610 1675 aaKnown RBP13.46□□□□□ -0.26
KCNMA1-290ENST00000640824 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
KCNMA1-290ENST00000640824 FBXO31Q5XUX0 539 aaPredicted RBP13.43□□□□□ -0.26
KCNMA1-290ENST00000640824 UHRF1BP1Q6BDS2 1440 aa13.43□□□□□ -0.26
KCNMA1-290ENST00000640824 MROH2AA6NES4 1674 aa13.43□□□□□ -0.26
KCNMA1-290ENST00000640824 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
KCNMA1-290ENST00000640824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.42□□□□□ -0.26
KCNMA1-290ENST00000640824 PREX1Q8TCU6 1659 aa13.42□□□□□ -0.26
KCNMA1-290ENST00000640824 DUOX2Q9NRD8 1548 aa13.42□□□□□ -0.26
KCNMA1-290ENST00000640824 ANKRD30AQ9BXX3 1397 aa13.42□□□□□ -0.26
KCNMA1-290ENST00000640824 SHANK2Q9UPX8 1470 aa13.42□□□□□ -0.26
KCNMA1-290ENST00000640824 PTPRKQ15262 1439 aa13.41□□□□□ -0.26
KCNMA1-290ENST00000640824 NPATQ14207 1427 aa13.4□□□□□ -0.26
KCNMA1-290ENST00000640824 NCOA1Q15788 1441 aa13.4□□□□□ -0.26
KCNMA1-290ENST00000640824 ITGAEP38570 1179 aa13.4□□□□□ -0.26
KCNMA1-290ENST00000640824 CROCC2H7BZ55 1655 aa13.4□□□□□ -0.26
KCNMA1-290ENST00000640824 CFAP65Q6ZU64 1925 aaKnown RBP13.38□□□□□ -0.27
KCNMA1-290ENST00000640824 EIF2AK4Q9P2K8 1649 aaKnown RBP13.36□□□□□ -0.27
KCNMA1-290ENST00000640824 KDM5DQ9BY66 1539 aa13.36□□□□□ -0.27
KCNMA1-290ENST00000640824 DMRT2Q9Y5R5 561 aa13.36□□□□□ -0.27
KCNMA1-290ENST00000640824 ERBINQ96RT1 1412 aa13.36□□□□□ -0.27
KCNMA1-290ENST00000640824 RNF17Q9BXT8 1623 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-290ENST00000640824 TNRQ92752 1358 aa13.34□□□□□ -0.27
KCNMA1-290ENST00000640824 ADGRL2O95490 1459 aa13.34□□□□□ -0.27
KCNMA1-290ENST00000640824 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
KCNMA1-290ENST00000640824 ABCC3O15438 1527 aa13.34□□□□□ -0.27
KCNMA1-290ENST00000640824 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
KCNMA1-290ENST00000640824 KANK1Q14678 1352 aa13.33□□□□□ -0.27
KCNMA1-290ENST00000640824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.33□□□□□ -0.27
KCNMA1-290ENST00000640824 PZPP20742 1482 aa13.33□□□□□ -0.28
KCNMA1-290ENST00000640824 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
KCNMA1-290ENST00000640824 MSH5O43196 834 aa13.32□□□□□ -0.28
KCNMA1-290ENST00000640824 MROH1Q8NDA8 1641 aa13.31□□□□□ -0.28
KCNMA1-290ENST00000640824 ANKRD50Q9ULJ7 1429 aa13.31□□□□□ -0.28
KCNMA1-290ENST00000640824 CEP152O94986 1710 aa13.3□□□□□ -0.28
KCNMA1-290ENST00000640824 THEMISQ8N1K5 641 aaPredicted RBP13.3□□□□□ -0.28
KCNMA1-290ENST00000640824 ROCK1Q13464 1354 aa13.3□□□□□ -0.28
KCNMA1-290ENST00000640824 CAMSAP1Q5T5Y3 1602 aa13.29□□□□□ -0.28
KCNMA1-290ENST00000640824 RRBP1Q9P2E9 1410 aaKnown RBP13.29□□□□□ -0.28
KCNMA1-290ENST00000640824 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
KCNMA1-290ENST00000640824 MYO3AQ8NEV4 1616 aa13.28□□□□□ -0.28
KCNMA1-290ENST00000640824 ZC3H13Q5T200 1668 aaKnown RBP13.28□□□□□ -0.28
KCNMA1-290ENST00000640824 PKD2Q13563 968 aa13.28□□□□□ -0.28
KCNMA1-290ENST00000640824 ILDR1Q86SU0 546 aaPredicted RBP13.28□□□□□ -0.28
KCNMA1-290ENST00000640824 CEP170BQ9Y4F5 1589 aaPredicted RBP13.28□□□□□ -0.28
KCNMA1-290ENST00000640824 PRDM15P57071 1507 aaPredicted RBP13.27□□□□□ -0.29
KCNMA1-290ENST00000640824 DEPDC5O75140 1603 aa13.27□□□□□ -0.29
KCNMA1-290ENST00000640824 PTPRTO14522 1441 aa13.26□□□□□ -0.29
KCNMA1-290ENST00000640824 ERVK-7P63135 1459 aa13.26□□□□□ -0.29
KCNMA1-290ENST00000640824 ARHGAP31Q2M1Z3 1444 aa13.26□□□□□ -0.29
KCNMA1-290ENST00000640824 ZNF142P52746 1687 aaPredicted RBP13.25□□□□□ -0.29
KCNMA1-290ENST00000640824 NLRP1Q9C000 1473 aa13.25□□□□□ -0.29
KCNMA1-290ENST00000640824 ANKLE2Q86XL3 938 aa13.25□□□□□ -0.29
KCNMA1-290ENST00000640824 SPATA31D1Q6ZQQ2 1576 aa13.24□□□□□ -0.29
KCNMA1-290ENST00000640824 CERKQ8TCT0 537 aa13.24□□□□□ -0.29
KCNMA1-290ENST00000640824 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
KCNMA1-290ENST00000640824 IDI1Q13907 227 aa13.23□□□□□ -0.29
KCNMA1-290ENST00000640824 LMTK2Q8IWU2 1503 aa13.23□□□□□ -0.29
KCNMA1-290ENST00000640824 PLA2R1Q13018 1463 aa13.23□□□□□ -0.29
KCNMA1-290ENST00000640824 NUP155O75694 1391 aa13.22□□□□□ -0.29
KCNMA1-290ENST00000640824 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
KCNMA1-290ENST00000640824 UGGT1Q9NYU2 1555 aa13.22□□□□□ -0.29
KCNMA1-290ENST00000640824 FBXO41Q8TF61 875 aa13.2□□□□□ -0.3
KCNMA1-290ENST00000640824 SLC52A1Q9NWF4 448 aa13.19□□□□□ -0.3
KCNMA1-290ENST00000640824 LTKP29376 864 aa13.18□□□□□ -0.3
KCNMA1-290ENST00000640824 TXNDC2Q86VQ3 553 aa13.18□□□□□ -0.3
KCNMA1-290ENST00000640824 ZNF335Q9H4Z2 1342 aaPredicted RBP13.17□□□□□ -0.3
KCNMA1-290ENST00000640824 NOS1P29475 1434 aa13.17□□□□□ -0.3
KCNMA1-290ENST00000640824 NAIPQ13075 1403 aa13.17□□□□□ -0.3
KCNMA1-290ENST00000640824 TRIM52Q96A61 297 aa13.17□□□□□ -0.3
KCNMA1-290ENST00000640824 EFCAB6Q5THR3 1501 aa13.17□□□□□ -0.3
KCNMA1-290ENST00000640824 UNC13BO14795 1591 aa13.16□□□□□ -0.3
KCNMA1-290ENST00000640824 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
KCNMA1-290ENST00000640824 TET3O43151 1660 aa13.15□□□□□ -0.3
KCNMA1-290ENST00000640824 UBR1Q8IWV7 1749 aa13.15□□□□□ -0.3
KCNMA1-290ENST00000640824 RPRD2Q5VT52 1461 aaKnown RBP13.15□□□□□ -0.3
KCNMA1-290ENST00000640824 CHGAP10645 457 aaKnown RBP13.14□□□□□ -0.31
KCNMA1-290ENST00000640824 SYNMO15061 1565 aa13.14□□□□□ -0.31
KCNMA1-290ENST00000640824 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
KCNMA1-290ENST00000640824 PIK3C2BO00750 1634 aa13.13□□□□□ -0.31
KCNMA1-290ENST00000640824 IQGAP3Q86VI3 1631 aa13.13□□□□□ -0.31
KCNMA1-290ENST00000640824 POLR1AO95602 1720 aaPredicted RBP13.13□□□□□ -0.31
KCNMA1-290ENST00000640824 GCC2Q8IWJ2 1684 aa13.13□□□□□ -0.31
KCNMA1-290ENST00000640824 NEURL4Q96JN8 1562 aa13.12□□□□□ -0.31
KCNMA1-290ENST00000640824 MED14O60244 1454 aa13.12□□□□□ -0.31
KCNMA1-290ENST00000640824 TMEM2Q9UHN6 1383 aa13.12□□□□□ -0.31
KCNMA1-290ENST00000640824 LTBP4Q8N2S1 1624 aa13.12□□□□□ -0.31
KCNMA1-290ENST00000640824 HFM1A2PYH4 1435 aa13.12□□□□□ -0.31
KCNMA1-290ENST00000640824 E9PCH4 1651 aa13.12□□□□□ -0.31
KCNMA1-290ENST00000640824 ARHGAP23Q9P227 1491 aa13.1□□□□□ -0.31
KCNMA1-290ENST00000640824 SLIT1O75093 1534 aa13.1□□□□□ -0.31
KCNMA1-290ENST00000640824 HDGFP51858 240 aaKnown RBP13.1□□□□□ -0.31
KCNMA1-290ENST00000640824 BCANQ96GW7 911 aa13.09□□□□□ -0.31
KCNMA1-290ENST00000640824 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-290ENST00000640824 SCAF11Q99590 1463 aaKnown RBP13.09□□□□□ -0.31
KCNMA1-290ENST00000640824 NUTM2DQ5VT03 806 aaPredicted RBP13.07□□□□□ -0.32
KCNMA1-290ENST00000640824 SLC26A8Q96RN1 970 aa13.07□□□□□ -0.32
KCNMA1-290ENST00000640824 KDM5AP29375 1690 aaKnown RBP13.07□□□□□ -0.32
KCNMA1-290ENST00000640824 IQGAP1P46940 1657 aa13.07□□□□□ -0.32
KCNMA1-290ENST00000640824 MYO5BQ9ULV0 1848 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms