RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
PAX6-259ENST00000639916 RPRD2Q5VT52 1461 aaKnown RBP12.22□□□□□ -0.45
PAX6-259ENST00000639916 PPP4R2Q9NY27 417 aa12.22□□□□□ -0.45
PAX6-259ENST00000639916 ARHGAP5Q13017 1502 aa12.22□□□□□ -0.45
PAX6-259ENST00000639916 UHRF1BP1LA0JNW5 1464 aa12.22□□□□□ -0.45
PAX6-259ENST00000639916 PKD2Q13563 968 aa12.22□□□□□ -0.45
PAX6-259ENST00000639916 KIF15Q9NS87 1388 aa12.21□□□□□ -0.45
PAX6-259ENST00000639916 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
PAX6-259ENST00000639916 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.45
PAX6-259ENST00000639916 NUP155O75694 1391 aa12.21□□□□□ -0.46
PAX6-259ENST00000639916 ZCCHC11Q5TAX3 1644 aaKnown RBP12.2□□□□□ -0.46
PAX6-259ENST00000639916 ANP32AP39687 249 aaKnown RBP12.2□□□□□ -0.46
PAX6-259ENST00000639916 KIAA1107Q9UPP5 1409 aa12.19□□□□□ -0.46
PAX6-259ENST00000639916 CCER2I3L3R5 266 aa12.19□□□□□ -0.46
PAX6-259ENST00000639916 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
PAX6-259ENST00000639916 MYO5CQ9NQX4 1742 aa12.18□□□□□ -0.46
PAX6-259ENST00000639916 USP35Q9P2H5 1018 aa12.17□□□□□ -0.46
PAX6-259ENST00000639916 HSPA5P11021 654 aaKnown RBP12.17□□□□□ -0.46
PAX6-259ENST00000639916 PLCH2O75038 1416 aa12.16□□□□□ -0.46
PAX6-259ENST00000639916 TEX14Q8IWB6 1497 aa12.16□□□□□ -0.46
PAX6-259ENST00000639916 EIF4G2P78344 907 aaKnown RBP eCLIP12.16□□□□□ -0.46
PAX6-259ENST00000639916 NBPF8Q3BBV2 869 aa12.16□□□□□ -0.46
PAX6-259ENST00000639916 EFCAB2Q5VUJ9 269 aa12.16□□□□□ -0.46
PAX6-259ENST00000639916 NEFMP07197 916 aa12.16□□□□□ -0.46
PAX6-259ENST00000639916 B4GALNT3Q6L9W6 998 aa12.16□□□□□ -0.46
PAX6-259ENST00000639916 PLEKHH2Q8IVE3 1493 aa12.15□□□□□ -0.46
PAX6-259ENST00000639916 KDM5DQ9BY66 1539 aa12.13□□□□□ -0.47
PAX6-259ENST00000639916 ARHGEF12Q9NZN5 1544 aa12.13□□□□□ -0.47
PAX6-259ENST00000639916 MAST1Q9Y2H9 1570 aa12.12□□□□□ -0.47
PAX6-259ENST00000639916 ANP32CO43423 234 aa12.11□□□□□ -0.47
PAX6-259ENST00000639916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.47
PAX6-259ENST00000639916 LAS1LQ9Y4W2 734 aaKnown RBP12.1□□□□□ -0.47
PAX6-259ENST00000639916 WDR7Q9Y4E6 1490 aa12.1□□□□□ -0.47
PAX6-259ENST00000639916 ZNF326Q5BKZ1 582 aaKnown RBP12.09□□□□□ -0.47
PAX6-259ENST00000639916 CYB5RLQ6IPT4 315 aa12.09□□□□□ -0.47
PAX6-259ENST00000639916 FAM43AQ8N2R8 423 aa12.09□□□□□ -0.47
PAX6-259ENST00000639916 FAM135AQ9P2D6 1515 aa12.09□□□□□ -0.47
PAX6-259ENST00000639916 TRAPPC8Q9Y2L5 1435 aa12.08□□□□□ -0.48
PAX6-259ENST00000639916 GSE1Q14687 1217 aa12.08□□□□□ -0.48
PAX6-259ENST00000639916 PLXNC1O60486 1568 aa12.08□□□□□ -0.48
PAX6-259ENST00000639916 ABCC1P33527 1531 aa12.07□□□□□ -0.48
PAX6-259ENST00000639916 HNRNPUQ00839 825 aaKnown RBP eCLIP12.07□□□□□ -0.48
PAX6-259ENST00000639916 AFAP1Q8N556 730 aa12.07□□□□□ -0.48
PAX6-259ENST00000639916 A0A0U1RQG5 324 aaPredicted RBP12.07□□□□□ -0.48
PAX6-259ENST00000639916 DUOX2Q9NRD8 1548 aa12.06□□□□□ -0.48
PAX6-259ENST00000639916 DNAJC5Q9H3Z4 198 aa12.06□□□□□ -0.48
PAX6-259ENST00000639916 SPAG9O60271 1321 aaKnown RBP12.05□□□□□ -0.48
PAX6-259ENST00000639916 ARAP3Q8WWN8 1544 aa12.05□□□□□ -0.48
PAX6-259ENST00000639916 ASXL2Q76L83 1435 aa12.05□□□□□ -0.48
PAX6-259ENST00000639916 NPM1P06748 294 aaKnown RBP eCLIP12.05□□□□□ -0.48
PAX6-259ENST00000639916 SPATA31E1Q6ZUB1 1445 aa12.05□□□□□ -0.48
PAX6-259ENST00000639916 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
PAX6-259ENST00000639916 UNC13BO14795 1591 aa12.04□□□□□ -0.48
PAX6-259ENST00000639916 ERBINQ96RT1 1412 aa12.04□□□□□ -0.48
PAX6-259ENST00000639916 DCAF11Q8TEB1 546 aa12.04□□□□□ -0.48
PAX6-259ENST00000639916 FANCAO15360 1455 aa12.03□□□□□ -0.48
PAX6-259ENST00000639916 RBM10P98175 930 aaKnown RBP12.03□□□□□ -0.48
PAX6-259ENST00000639916 CCDC7Q96M83 1385 aa12.03□□□□□ -0.48
PAX6-259ENST00000639916 PPM1GO15355 546 aaPredicted RBP12.02□□□□□ -0.49
PAX6-259ENST00000639916 FGD1P98174 961 aa12.02□□□□□ -0.49
PAX6-259ENST00000639916 AAMPQ13685 434 aa12.02□□□□□ -0.49
PAX6-259ENST00000639916 CCDC144AA2RUR9 1427 aa12.02□□□□□ -0.49
PAX6-259ENST00000639916 ABCA9Q8IUA7 1624 aa12.02□□□□□ -0.49
PAX6-259ENST00000639916 RTEL1-TNFRSF6BF6WH68 1400 aa12.02□□□□□ -0.49
PAX6-259ENST00000639916 UHRF1BP1Q6BDS2 1440 aa12.02□□□□□ -0.49
PAX6-259ENST00000639916 IQGAP3Q86VI3 1631 aa12□□□□□ -0.49
PAX6-259ENST00000639916 USP47Q96K76 1375 aa12□□□□□ -0.49
PAX6-259ENST00000639916 FRAT1Q92837 279 aaPredicted RBP12□□□□□ -0.49
PAX6-259ENST00000639916 PLA2R1Q13018 1463 aa12□□□□□ -0.49
PAX6-259ENST00000639916 KIF7Q2M1P5 1343 aa12□□□□□ -0.49
PAX6-259ENST00000639916 HSP90AA2PQ14568 343 aaPredicted RBP12□□□□□ -0.49
PAX6-259ENST00000639916 RGL3Q3MIN7 710 aa12□□□□□ -0.49
PAX6-259ENST00000639916 SCAPERQ9BY12 1400 aa11.99□□□□□ -0.49
PAX6-259ENST00000639916 CARD11Q9BXL7 1154 aa11.99□□□□□ -0.49
PAX6-259ENST00000639916 MAGI2Q86UL8 1455 aa11.99□□□□□ -0.49
PAX6-259ENST00000639916 CNTLNQ9NXG0 1405 aa11.99□□□□□ -0.49
PAX6-259ENST00000639916 ADGRL1O94910 1474 aa11.99□□□□□ -0.49
PAX6-259ENST00000639916 ZFYVE16Q7Z3T8 1539 aa11.98□□□□□ -0.49
PAX6-259ENST00000639916 PDE4CQ08493 712 aa11.98□□□□□ -0.49
PAX6-259ENST00000639916 RALGAPBQ86X10 1494 aa11.98□□□□□ -0.49
PAX6-259ENST00000639916 RRP9O43818 475 aaKnown RBP11.98□□□□□ -0.49
PAX6-259ENST00000639916 NPM2Q86SE8 214 aaKnown RBP11.96□□□□□ -0.5
PAX6-259ENST00000639916 DMRT2Q9Y5R5 561 aa11.96□□□□□ -0.5
PAX6-259ENST00000639916 ATP7AQ04656 1500 aa11.96□□□□□ -0.5
PAX6-259ENST00000639916 KDM5CP41229 1560 aa11.95□□□□□ -0.5
PAX6-259ENST00000639916 POLR3GLQ9BT43 218 aa11.95□□□□□ -0.5
PAX6-259ENST00000639916 ATP10AO60312 1499 aa11.94□□□□□ -0.5
PAX6-259ENST00000639916 ROCK2O75116 1388 aaKnown RBP11.94□□□□□ -0.5
PAX6-259ENST00000639916 KIF3BO15066 747 aa11.94□□□□□ -0.5
PAX6-259ENST00000639916 RIMBP3CA6NJZ7 1639 aa11.94□□□□□ -0.5
PAX6-259ENST00000639916 RIMBP3BA6NNM3 1639 aa11.94□□□□□ -0.5
PAX6-259ENST00000639916 RIMBP3Q9UFD9 1639 aa11.94□□□□□ -0.5
PAX6-259ENST00000639916 CD109Q6YHK3 1445 aa11.93□□□□□ -0.5
PAX6-259ENST00000639916 INO80Q9ULG1 1556 aaPredicted RBP11.93□□□□□ -0.5
PAX6-259ENST00000639916 POLR1AO95602 1720 aaPredicted RBP11.93□□□□□ -0.5
PAX6-259ENST00000639916 PRAG1Q86YV5 1406 aa11.93□□□□□ -0.5
PAX6-259ENST00000639916 ST20-MTHFSA0A0A6YYL1 179 aa11.93□□□□□ -0.5
PAX6-259ENST00000639916 PRKRIP1Q9H875 184 aaPredicted RBP11.93□□□□□ -0.5
PAX6-259ENST00000639916 BCORL1Q5H9F3 1711 aa11.93□□□□□ -0.5
PAX6-259ENST00000639916 DHX29Q7Z478 1369 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms