RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ARHGAP35Q9NRY4 1499 aa18.21■□□□□ 0.51
PTP4A1-207ENST00000639568 MED14O60244 1454 aa18.2■□□□□ 0.5
PTP4A1-207ENST00000639568 FAM135AQ9P2D6 1515 aa18.2■□□□□ 0.5
PTP4A1-207ENST00000639568 CFDP1Q9UEE9 299 aaPredicted RBP18.2■□□□□ 0.5
PTP4A1-207ENST00000639568 KIAA1107Q9UPP5 1409 aa18.18■□□□□ 0.5
PTP4A1-207ENST00000639568 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
PTP4A1-207ENST00000639568 PLEKHH2Q8IVE3 1493 aa18.18■□□□□ 0.5
PTP4A1-207ENST00000639568 WASHC2CQ9Y4E1 1318 aa18.18■□□□□ 0.5
PTP4A1-207ENST00000639568 CCDC18Q5T9S5 1454 aa18.17■□□□□ 0.5
PTP4A1-207ENST00000639568 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
PTP4A1-207ENST00000639568 UGGT1Q9NYU2 1555 aa18.16■□□□□ 0.5
PTP4A1-207ENST00000639568 NLRP1Q9C000 1473 aa18.15■□□□□ 0.5
PTP4A1-207ENST00000639568 KIF3BO15066 747 aa18.15■□□□□ 0.5
PTP4A1-207ENST00000639568 PZPP20742 1482 aa18.14■□□□□ 0.5
PTP4A1-207ENST00000639568 GPATCH8Q9UKJ3 1502 aaKnown RBP18.13■□□□□ 0.49
PTP4A1-207ENST00000639568 INO80Q9ULG1 1556 aaPredicted RBP18.13■□□□□ 0.49
PTP4A1-207ENST00000639568 DEPDC5O75140 1603 aa18.13■□□□□ 0.49
PTP4A1-207ENST00000639568 CDC42BPAQ5VT25 1732 aa18.12■□□□□ 0.49
PTP4A1-207ENST00000639568 SYNMO15061 1565 aa18.12■□□□□ 0.49
PTP4A1-207ENST00000639568 DHX29Q7Z478 1369 aaKnown RBP18.11■□□□□ 0.49
PTP4A1-207ENST00000639568 FAM135BQ49AJ0 1406 aa18.11■□□□□ 0.49
PTP4A1-207ENST00000639568 IQGAP1P46940 1657 aa18.1■□□□□ 0.49
PTP4A1-207ENST00000639568 CASKIN1Q8WXD9 1431 aa18.1■□□□□ 0.49
PTP4A1-207ENST00000639568 CCNB3Q8WWL7 1395 aa18.1■□□□□ 0.49
PTP4A1-207ENST00000639568 UPF1Q92900 1129 aaKnown RBP eCLIP18.1■□□□□ 0.49
PTP4A1-207ENST00000639568 LRRIQ1Q96JM4 1722 aa18.08■□□□□ 0.48
PTP4A1-207ENST00000639568 KDM5DQ9BY66 1539 aa18.08■□□□□ 0.48
PTP4A1-207ENST00000639568 ADGBQ8N7X0 1667 aa18.07■□□□□ 0.48
PTP4A1-207ENST00000639568 SRCAPQ6ZRS2 3230 aa18.06■□□□□ 0.48
PTP4A1-207ENST00000639568 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
PTP4A1-207ENST00000639568 RTEL1-TNFRSF6BF6WH68 1400 aa18.04■□□□□ 0.48
PTP4A1-207ENST00000639568 TRIM52Q96A61 297 aa18.03■□□□□ 0.48
PTP4A1-207ENST00000639568 SETD1AO15047 1707 aaKnown RBP18.03■□□□□ 0.48
PTP4A1-207ENST00000639568 ZNF644Q9H582 1327 aaPredicted RBP18.02■□□□□ 0.48
PTP4A1-207ENST00000639568 TXNDC2Q86VQ3 553 aa18.01■□□□□ 0.47
PTP4A1-207ENST00000639568 ZNF772Q68DY9 489 aaPredicted RBP18■□□□□ 0.47
PTP4A1-207ENST00000639568 EID1Q9Y6B2 187 aa18■□□□□ 0.47
PTP4A1-207ENST00000639568 MEX3CQ5U5Q3 659 aaKnown RBP17.99■□□□□ 0.47
PTP4A1-207ENST00000639568 SCAF11Q99590 1463 aaKnown RBP17.99■□□□□ 0.47
PTP4A1-207ENST00000639568 JCADQ9P266 1359 aa17.98■□□□□ 0.47
PTP4A1-207ENST00000639568 TMEM94Q12767 1356 aa17.97■□□□□ 0.47
PTP4A1-207ENST00000639568 LTKP29376 864 aa17.97■□□□□ 0.47
PTP4A1-207ENST00000639568 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
PTP4A1-207ENST00000639568 MBD5Q9P267 1494 aa17.96■□□□□ 0.47
PTP4A1-207ENST00000639568 MTUS2Q5JR59 1369 aa17.95■□□□□ 0.46
PTP4A1-207ENST00000639568 PROSER2Q86WR7 435 aaPredicted RBP17.95■□□□□ 0.46
PTP4A1-207ENST00000639568 RXRBP28702 533 aa17.94■□□□□ 0.46
PTP4A1-207ENST00000639568 RSPH4AQ5TD94 716 aa17.92■□□□□ 0.46
PTP4A1-207ENST00000639568 RBM33Q96EV2 1170 aaKnown RBP17.92■□□□□ 0.46
PTP4A1-207ENST00000639568 SLAIN2Q9P270 581 aa17.92■□□□□ 0.46
PTP4A1-207ENST00000639568 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
PTP4A1-207ENST00000639568 ZC3H13Q5T200 1668 aaKnown RBP17.91■□□□□ 0.46
PTP4A1-207ENST00000639568 ROBO1Q9Y6N7 1651 aa17.91■□□□□ 0.46
PTP4A1-207ENST00000639568 KCNA6P17658 529 aa17.91■□□□□ 0.46
PTP4A1-207ENST00000639568 SPATA31A6Q5VVP1 1343 aa17.9■□□□□ 0.46
PTP4A1-207ENST00000639568 ERVK-7P63135 1459 aa17.89■□□□□ 0.45
PTP4A1-207ENST00000639568 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
PTP4A1-207ENST00000639568 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
PTP4A1-207ENST00000639568 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
PTP4A1-207ENST00000639568 MSH6P52701 1360 aa17.88■□□□□ 0.45
PTP4A1-207ENST00000639568 CCDC141Q6ZP82 1450 aa17.88■□□□□ 0.45
PTP4A1-207ENST00000639568 NCOA2Q15596 1464 aa17.85■□□□□ 0.45
PTP4A1-207ENST00000639568 XIRP1Q702N8 1843 aaKnown RBP17.85■□□□□ 0.45
PTP4A1-207ENST00000639568 ARHGAP23Q9P227 1491 aa17.85■□□□□ 0.45
PTP4A1-207ENST00000639568 SLIT1O75093 1534 aa17.84■□□□□ 0.45
PTP4A1-207ENST00000639568 FOXD1Q16676 465 aa17.84■□□□□ 0.45
PTP4A1-207ENST00000639568 SLC26A8Q96RN1 970 aa17.84■□□□□ 0.45
PTP4A1-207ENST00000639568 ABCC3O15438 1527 aa17.83■□□□□ 0.45
PTP4A1-207ENST00000639568 BCANQ96GW7 911 aa17.82■□□□□ 0.44
PTP4A1-207ENST00000639568 PHLPP1O60346 1717 aa17.81■□□□□ 0.44
PTP4A1-207ENST00000639568 UBR1Q8IWV7 1749 aa17.81■□□□□ 0.44
PTP4A1-207ENST00000639568 TMEM2Q9UHN6 1383 aa17.81■□□□□ 0.44
PTP4A1-207ENST00000639568 MAP3K1Q13233 1512 aa17.81■□□□□ 0.44
PTP4A1-207ENST00000639568 FGD6Q6ZV73 1430 aa17.81■□□□□ 0.44
PTP4A1-207ENST00000639568 LRP6O75581 1613 aa17.8■□□□□ 0.44
PTP4A1-207ENST00000639568 TIAM1Q13009 1591 aa17.8■□□□□ 0.44
PTP4A1-207ENST00000639568 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
PTP4A1-207ENST00000639568 CDK12Q9NYV4 1490 aaPredicted RBP17.79■□□□□ 0.44
PTP4A1-207ENST00000639568 NUTM2BA6NNL0 878 aaPredicted RBP17.78■□□□□ 0.44
PTP4A1-207ENST00000639568 NUTM2EB1AL46 878 aaPredicted RBP17.78■□□□□ 0.44
PTP4A1-207ENST00000639568 NUTM2AQ8IVF1 878 aaPredicted RBP17.78■□□□□ 0.44
PTP4A1-207ENST00000639568 ZRANB1Q9UGI0 708 aa17.78■□□□□ 0.44
PTP4A1-207ENST00000639568 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.44
PTP4A1-207ENST00000639568 C14orf37Q86TY3 774 aa17.76■□□□□ 0.43
PTP4A1-207ENST00000639568 NKTRP30414 1462 aaKnown RBP17.75■□□□□ 0.43
PTP4A1-207ENST00000639568 CAMSAP2Q08AD1 1489 aa17.75■□□□□ 0.43
PTP4A1-207ENST00000639568 CEP162Q5TB80 1403 aa17.75■□□□□ 0.43
PTP4A1-207ENST00000639568 AFF2P51816 1311 aa17.74■□□□□ 0.43
PTP4A1-207ENST00000639568 COL16A1Q07092 1604 aaPredicted RBP17.72■□□□□ 0.43
PTP4A1-207ENST00000639568 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
PTP4A1-207ENST00000639568 RBM6P78332 1123 aaKnown RBP17.71■□□□□ 0.43
PTP4A1-207ENST00000639568 QTRT2Q9H974 415 aaKnown RBP17.71■□□□□ 0.43
PTP4A1-207ENST00000639568 ATF3P18847 181 aa17.7■□□□□ 0.42
PTP4A1-207ENST00000639568 ARHGAP31Q2M1Z3 1444 aa17.7■□□□□ 0.42
PTP4A1-207ENST00000639568 IDI1Q13907 227 aa17.69■□□□□ 0.42
PTP4A1-207ENST00000639568 CADPS2Q86UW7 1296 aa17.69■□□□□ 0.42
PTP4A1-207ENST00000639568 EFCAB6Q5THR3 1501 aa17.68■□□□□ 0.42
PTP4A1-207ENST00000639568 TET3O43151 1660 aa17.67■□□□□ 0.42
PTP4A1-207ENST00000639568 RGS12O14924 1447 aa17.67■□□□□ 0.42
PTP4A1-207ENST00000639568 NGLY1Q96IV0 654 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms