RNA–Protein interactions for RNA: ENST00000639483.1

KCNMA1-260, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 4,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-260ENST00000639483 TCOF1Q13428 1488 aaKnown RBP21.52■■□□□ 1.04
KCNMA1-260ENST00000639483 CCDC141Q6ZP82 1450 aa21.52■■□□□ 1.04
KCNMA1-260ENST00000639483 PPM1GO15355 546 aaPredicted RBP21.51■■□□□ 1.03
KCNMA1-260ENST00000639483 RAPGEF3O95398 923 aa21.51■■□□□ 1.03
KCNMA1-260ENST00000639483 RALBP1Q15311 655 aa21.49■■□□□ 1.03
KCNMA1-260ENST00000639483 DAXXQ9UER7 740 aaPredicted RBP21.48■■□□□ 1.03
KCNMA1-260ENST00000639483 SRPK2P78362 688 aaKnown RBP21.48■■□□□ 1.03
KCNMA1-260ENST00000639483 MYT1Q01538 1121 aa21.48■■□□□ 1.03
KCNMA1-260ENST00000639483 RPRD2Q5VT52 1461 aaKnown RBP21.48■■□□□ 1.03
KCNMA1-260ENST00000639483 NEFMP07197 916 aa21.47■■□□□ 1.03
KCNMA1-260ENST00000639483 FAM69CQ0P6D2 419 aa21.47■■□□□ 1.03
KCNMA1-260ENST00000639483 NLRP13Q86W25 1043 aa21.46■■□□□ 1.03
KCNMA1-260ENST00000639483 PLEKHG5O94827 1062 aa21.45■■□□□ 1.03
KCNMA1-260ENST00000639483 CFAP70Q5T0N1 1121 aa21.45■■□□□ 1.03
KCNMA1-260ENST00000639483 PPP4R2Q9NY27 417 aa21.45■■□□□ 1.02
KCNMA1-260ENST00000639483 PLEKHH2Q8IVE3 1493 aa21.45■■□□□ 1.02
KCNMA1-260ENST00000639483 SLC24A1O60721 1099 aa21.44■■□□□ 1.02
KCNMA1-260ENST00000639483 TMEM132EQ6IEE7 984 aa21.42■■□□□ 1.02
KCNMA1-260ENST00000639483 TRHP20396 242 aaPredicted RBP21.42■■□□□ 1.02
KCNMA1-260ENST00000639483 MYBBP1AQ9BQG0 1328 aaKnown RBP21.41■■□□□ 1.02
KCNMA1-260ENST00000639483 MORC1Q86VD1 984 aa21.4■■□□□ 1.02
KCNMA1-260ENST00000639483 CCDC146Q8IYE0 955 aa21.4■■□□□ 1.02
KCNMA1-260ENST00000639483 KDM6BO15054 1643 aa21.39■■□□□ 1.01
KCNMA1-260ENST00000639483 SYCP2Q9BX26 1530 aa21.37■■□□□ 1.01
KCNMA1-260ENST00000639483 U2SURPO15042 1029 aaKnown RBP21.37■■□□□ 1.01
KCNMA1-260ENST00000639483 TSHZ2Q9NRE2 1034 aa21.35■■□□□ 1.01
KCNMA1-260ENST00000639483 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
KCNMA1-260ENST00000639483 ZBED9Q6R2W3 1325 aa21.34■■□□□ 1.01
KCNMA1-260ENST00000639483 CFAP53Q96M91 514 aa21.34■■□□□ 1.01
KCNMA1-260ENST00000639483 EIF3AQ14152 1382 aaKnown RBP21.32■■□□□ 1
KCNMA1-260ENST00000639483 ITSN2Q9NZM3 1697 aa21.32■■□□□ 1
KCNMA1-260ENST00000639483 DNMT1P26358 1616 aaKnown RBP21.32■■□□□ 1
KCNMA1-260ENST00000639483 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.31■■□□□ 1
KCNMA1-260ENST00000639483 PZPP20742 1482 aa21.31■■□□□ 1
KCNMA1-260ENST00000639483 SOX12O15370 315 aa21.3■■□□□ 1
KCNMA1-260ENST00000639483 ANP32AP39687 249 aaKnown RBP21.3■■□□□ 1
KCNMA1-260ENST00000639483 RCAN3Q9UKA8 241 aa21.3■■□□□ 1
KCNMA1-260ENST00000639483 TRAPPC8Q9Y2L5 1435 aa21.3■■□□□ 1
KCNMA1-260ENST00000639483 FRAT1Q92837 279 aaPredicted RBP21.28■■□□□ 1
KCNMA1-260ENST00000639483 ADGRL1O94910 1474 aa21.27■■□□□ 1
KCNMA1-260ENST00000639483 NUTM2FA1L443 756 aa21.27■■□□□ 1
KCNMA1-260ENST00000639483 MINK1Q8N4C8 1332 aaPredicted RBP21.26■□□□□ 0.99
KCNMA1-260ENST00000639483 PLCH2O75038 1416 aa21.26■□□□□ 0.99
KCNMA1-260ENST00000639483 FANCAO15360 1455 aa21.26■□□□□ 0.99
KCNMA1-260ENST00000639483 RBM19Q9Y4C8 960 aaKnown RBP21.26■□□□□ 0.99
KCNMA1-260ENST00000639483 PLIN1O60240 522 aa21.25■□□□□ 0.99
KCNMA1-260ENST00000639483 CD109Q6YHK3 1445 aa21.25■□□□□ 0.99
KCNMA1-260ENST00000639483 VGFO15240 615 aaPredicted RBP21.25■□□□□ 0.99
KCNMA1-260ENST00000639483 C14orf37Q86TY3 774 aa21.25■□□□□ 0.99
KCNMA1-260ENST00000639483 RRP7AQ9Y3A4 280 aaKnown RBP21.23■□□□□ 0.99
KCNMA1-260ENST00000639483 LAS1LQ9Y4W2 734 aaKnown RBP21.23■□□□□ 0.99
KCNMA1-260ENST00000639483 U2AF1L5P0DN76 240 aaPredicted RBP21.23■□□□□ 0.99
KCNMA1-260ENST00000639483 U2AF1Q01081 240 aaKnown RBP eCLIP21.23■□□□□ 0.99
KCNMA1-260ENST00000639483 LRRIQ1Q96JM4 1722 aa21.22■□□□□ 0.99
KCNMA1-260ENST00000639483 CENPJQ9HC77 1338 aaPredicted RBP21.22■□□□□ 0.99
KCNMA1-260ENST00000639483 PNISRQ8TF01 805 aaKnown RBP21.21■□□□□ 0.99
KCNMA1-260ENST00000639483 ZBTB7CA1YPR0 619 aa21.21■□□□□ 0.99
KCNMA1-260ENST00000639483 CDCA7LQ96GN5 454 aa21.2■□□□□ 0.98
KCNMA1-260ENST00000639483 ASXL2Q76L83 1435 aa21.19■□□□□ 0.98
KCNMA1-260ENST00000639483 ERCC6L2Q5T890 1561 aa21.19■□□□□ 0.98
KCNMA1-260ENST00000639483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.19■□□□□ 0.98
KCNMA1-260ENST00000639483 ABCC2Q92887 1545 aa21.18■□□□□ 0.98
KCNMA1-260ENST00000639483 ADGRF5Q8IZF2 1346 aa21.18■□□□□ 0.98
KCNMA1-260ENST00000639483 MAPK8IP3Q9UPT6 1336 aa21.18■□□□□ 0.98
KCNMA1-260ENST00000639483 ABCA8O94911 1581 aa21.18■□□□□ 0.98
KCNMA1-260ENST00000639483 ADAMTS8Q9UP79 889 aa21.18■□□□□ 0.98
KCNMA1-260ENST00000639483 ERBINQ96RT1 1412 aa21.17■□□□□ 0.98
KCNMA1-260ENST00000639483 RTL5Q5HYW3 569 aaPredicted RBP21.17■□□□□ 0.98
KCNMA1-260ENST00000639483 APAF1O14727 1248 aa21.17■□□□□ 0.98
KCNMA1-260ENST00000639483 CABP2Q9NPB3 220 aa21.17■□□□□ 0.98
KCNMA1-260ENST00000639483 ABCC10Q5T3U5 1492 aa21.17■□□□□ 0.98
KCNMA1-260ENST00000639483 FAM135AQ9P2D6 1515 aa21.17■□□□□ 0.98
KCNMA1-260ENST00000639483 SLC12A5Q9H2X9 1139 aa21.17■□□□□ 0.98
KCNMA1-260ENST00000639483 RGS3P49796 1198 aa21.16■□□□□ 0.98
KCNMA1-260ENST00000639483 TEX14Q8IWB6 1497 aa21.14■□□□□ 0.97
KCNMA1-260ENST00000639483 GCC2Q8IWJ2 1684 aa21.13■□□□□ 0.97
KCNMA1-260ENST00000639483 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
KCNMA1-260ENST00000639483 HDGFL2Q7Z4V5 671 aaPredicted RBP21.13■□□□□ 0.97
KCNMA1-260ENST00000639483 ADGRL2O95490 1459 aa21.12■□□□□ 0.97
KCNMA1-260ENST00000639483 EXOC6Q8TAG9 804 aa21.12■□□□□ 0.97
KCNMA1-260ENST00000639483 CHD1O14646 1710 aa21.12■□□□□ 0.97
KCNMA1-260ENST00000639483 NBR1Q14596 966 aa21.12■□□□□ 0.97
KCNMA1-260ENST00000639483 MBD5Q9P267 1494 aa21.11■□□□□ 0.97
KCNMA1-260ENST00000639483 BRD4O60885 1362 aaPredicted RBP21.11■□□□□ 0.97
KCNMA1-260ENST00000639483 DISP3Q9P2K9 1392 aa21.11■□□□□ 0.97
KCNMA1-260ENST00000639483 WDR7Q9Y4E6 1490 aa21.11■□□□□ 0.97
KCNMA1-260ENST00000639483 EVC2Q86UK5 1308 aa21.1■□□□□ 0.97
KCNMA1-260ENST00000639483 PPP2R1AP30153 589 aa21.1■□□□□ 0.97
KCNMA1-260ENST00000639483 SHANK2Q9UPX8 1470 aa21.1■□□□□ 0.97
KCNMA1-260ENST00000639483 STAC3Q96MF2 364 aa21.09■□□□□ 0.97
KCNMA1-260ENST00000639483 FBXO31Q5XUX0 539 aaPredicted RBP21.08■□□□□ 0.96
KCNMA1-260ENST00000639483 DHX29Q7Z478 1369 aaKnown RBP21.08■□□□□ 0.96
KCNMA1-260ENST00000639483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.07■□□□□ 0.96
KCNMA1-260ENST00000639483 GGNBP2Q9H3C7 697 aa21.07■□□□□ 0.96
KCNMA1-260ENST00000639483 TERF2IPQ9NYB0 399 aa21.07■□□□□ 0.96
KCNMA1-260ENST00000639483 ZBTB47Q9UFB7 747 aaPredicted RBP21.06■□□□□ 0.96
KCNMA1-260ENST00000639483 DENND4BO75064 1496 aaPredicted RBP21.06■□□□□ 0.96
KCNMA1-260ENST00000639483 PDE3BQ13370 1112 aa21.06■□□□□ 0.96
KCNMA1-260ENST00000639483 RRP1P56182 461 aaKnown RBP21.06■□□□□ 0.96
KCNMA1-260ENST00000639483 ERICH6BQ5W0A0 696 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms