RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 CC2D1BQ5T0F9 858 aaKnown RBP12.55□□□□□ -0.4
NECAP1-215ENST00000639071 LRPPRCP42704 1394 aaKnown RBP12.54□□□□□ -0.4
NECAP1-215ENST00000639071 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
NECAP1-215ENST00000639071 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
NECAP1-215ENST00000639071 EIF4G3O43432 1585 aaKnown RBP12.53□□□□□ -0.4
NECAP1-215ENST00000639071 RALBP1Q15311 655 aa12.53□□□□□ -0.4
NECAP1-215ENST00000639071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.53□□□□□ -0.4
NECAP1-215ENST00000639071 MYT1LQ9UL68 1186 aa12.53□□□□□ -0.4
NECAP1-215ENST00000639071 BRD4O60885 1362 aaPredicted RBP12.53□□□□□ -0.4
NECAP1-215ENST00000639071 JPH4Q96JJ6 628 aa12.53□□□□□ -0.4
NECAP1-215ENST00000639071 RTL5Q5HYW3 569 aaPredicted RBP12.52□□□□□ -0.41
NECAP1-215ENST00000639071 ERCC6Q03468 1493 aa12.51□□□□□ -0.41
NECAP1-215ENST00000639071 CEP170Q5SW79 1584 aa12.51□□□□□ -0.41
NECAP1-215ENST00000639071 LAS1LQ9Y4W2 734 aaKnown RBP12.51□□□□□ -0.41
NECAP1-215ENST00000639071 CDC42BPAQ5VT25 1732 aa12.51□□□□□ -0.41
NECAP1-215ENST00000639071 KTN1Q86UP2 1357 aaKnown RBP12.5□□□□□ -0.41
NECAP1-215ENST00000639071 NLRP13Q86W25 1043 aa12.5□□□□□ -0.41
NECAP1-215ENST00000639071 PDE4AP27815 886 aa12.49□□□□□ -0.41
NECAP1-215ENST00000639071 ADCY10Q96PN6 1610 aa12.49□□□□□ -0.41
NECAP1-215ENST00000639071 ARHGEF12Q9NZN5 1544 aa12.48□□□□□ -0.41
NECAP1-215ENST00000639071 CARMIL2Q6F5E8 1435 aa12.48□□□□□ -0.41
NECAP1-215ENST00000639071 MAGI1Q96QZ7 1491 aaPredicted RBP12.47□□□□□ -0.41
NECAP1-215ENST00000639071 ATP10BO94823 1461 aa12.46□□□□□ -0.41
NECAP1-215ENST00000639071 PANK3Q9H999 370 aa12.46□□□□□ -0.42
NECAP1-215ENST00000639071 PARD3Q8TEW0 1356 aa12.46□□□□□ -0.42
NECAP1-215ENST00000639071 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.42
NECAP1-215ENST00000639071 ABCC10Q5T3U5 1492 aa12.46□□□□□ -0.42
NECAP1-215ENST00000639071 CCDC144AA2RUR9 1427 aa12.45□□□□□ -0.42
NECAP1-215ENST00000639071 PER1O15534 1290 aaPredicted RBP12.45□□□□□ -0.42
NECAP1-215ENST00000639071 CRBNQ96SW2 442 aa12.45□□□□□ -0.42
NECAP1-215ENST00000639071 E9PCH4 1651 aa12.45□□□□□ -0.42
NECAP1-215ENST00000639071 TCERG1O14776 1098 aaKnown RBP12.45□□□□□ -0.42
NECAP1-215ENST00000639071 PRAG1Q86YV5 1406 aa12.44□□□□□ -0.42
NECAP1-215ENST00000639071 KDM5DQ9BY66 1539 aa12.44□□□□□ -0.42
NECAP1-215ENST00000639071 SYNJ2O15056 1496 aa12.44□□□□□ -0.42
NECAP1-215ENST00000639071 FAM135AQ9P2D6 1515 aa12.44□□□□□ -0.42
NECAP1-215ENST00000639071 SHANK2Q9UPX8 1470 aa12.43□□□□□ -0.42
NECAP1-215ENST00000639071 C20orf194Q5TEA3 1177 aa12.43□□□□□ -0.42
NECAP1-215ENST00000639071 BACH2Q9BYV9 841 aa12.43□□□□□ -0.42
NECAP1-215ENST00000639071 NEFMP07197 916 aa12.42□□□□□ -0.42
NECAP1-215ENST00000639071 PTPRGP23470 1445 aa12.41□□□□□ -0.42
NECAP1-215ENST00000639071 PDE3BQ13370 1112 aa12.41□□□□□ -0.42
NECAP1-215ENST00000639071 TRPM1Q7Z4N2 1603 aa12.41□□□□□ -0.42
NECAP1-215ENST00000639071 TESK2Q96S53 571 aa12.41□□□□□ -0.42
NECAP1-215ENST00000639071 ABCA8O94911 1581 aa12.41□□□□□ -0.42
NECAP1-215ENST00000639071 ADAMTS8Q9UP79 889 aa12.4□□□□□ -0.42
NECAP1-215ENST00000639071 SLC4A3P48751 1232 aa12.39□□□□□ -0.43
NECAP1-215ENST00000639071 A2MP01023 1474 aa12.39□□□□□ -0.43
NECAP1-215ENST00000639071 PLA2R1Q13018 1463 aa12.39□□□□□ -0.43
NECAP1-215ENST00000639071 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
NECAP1-215ENST00000639071 CCDC141Q6ZP82 1450 aa12.38□□□□□ -0.43
NECAP1-215ENST00000639071 SAMD9LQ8IVG5 1584 aa12.38□□□□□ -0.43
NECAP1-215ENST00000639071 COL17A1Q9UMD9 1497 aaPredicted RBP12.37□□□□□ -0.43
NECAP1-215ENST00000639071 TMF1P82094 1093 aa12.37□□□□□ -0.43
NECAP1-215ENST00000639071 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
NECAP1-215ENST00000639071 ERBINQ96RT1 1412 aa12.37□□□□□ -0.43
NECAP1-215ENST00000639071 NUP160Q12769 1436 aa12.37□□□□□ -0.43
NECAP1-215ENST00000639071 SYCP2Q9BX26 1530 aa12.36□□□□□ -0.43
NECAP1-215ENST00000639071 MS4A1P11836 297 aa12.36□□□□□ -0.43
NECAP1-215ENST00000639071 BLMP54132 1417 aaPredicted RBP12.35□□□□□ -0.43
NECAP1-215ENST00000639071 CDC42BPBQ9Y5S2 1711 aa12.35□□□□□ -0.43
NECAP1-215ENST00000639071 ARHGEF5Q12774 1597 aa12.35□□□□□ -0.43
NECAP1-215ENST00000639071 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
NECAP1-215ENST00000639071 WDR43Q15061 677 aaKnown RBP eCLIP12.34□□□□□ -0.43
NECAP1-215ENST00000639071 CCDC146Q8IYE0 955 aa12.34□□□□□ -0.43
NECAP1-215ENST00000639071 PLEKHH1Q9ULM0 1364 aa12.33□□□□□ -0.44
NECAP1-215ENST00000639071 ARHGAP5Q13017 1502 aa12.33□□□□□ -0.44
NECAP1-215ENST00000639071 KNSTRNQ9Y448 316 aa12.33□□□□□ -0.44
NECAP1-215ENST00000639071 GPRASP1Q5JY77 1395 aa12.33□□□□□ -0.44
NECAP1-215ENST00000639071 MYO5CQ9NQX4 1742 aa12.33□□□□□ -0.44
NECAP1-215ENST00000639071 PRDM15P57071 1507 aaPredicted RBP12.32□□□□□ -0.44
NECAP1-215ENST00000639071 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
NECAP1-215ENST00000639071 RGS3P49796 1198 aa12.32□□□□□ -0.44
NECAP1-215ENST00000639071 ZMYM4Q5VZL5 1548 aa12.31□□□□□ -0.44
NECAP1-215ENST00000639071 DUSP27Q5VZP5 1158 aa12.3□□□□□ -0.44
NECAP1-215ENST00000639071 PREX2Q70Z35 1606 aa12.3□□□□□ -0.44
NECAP1-215ENST00000639071 WASHC2CQ9Y4E1 1318 aa12.3□□□□□ -0.44
NECAP1-215ENST00000639071 MAGI2Q86UL8 1455 aa12.3□□□□□ -0.44
NECAP1-215ENST00000639071 TTC37Q6PGP7 1564 aa12.3□□□□□ -0.44
NECAP1-215ENST00000639071 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
NECAP1-215ENST00000639071 KDM2BQ8NHM5 1336 aa12.28□□□□□ -0.44
NECAP1-215ENST00000639071 PPM1GO15355 546 aaPredicted RBP12.28□□□□□ -0.44
NECAP1-215ENST00000639071 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
NECAP1-215ENST00000639071 GOLGA2Q08379 1002 aa12.27□□□□□ -0.44
NECAP1-215ENST00000639071 DDRGK1Q96HY6 314 aa12.27□□□□□ -0.44
NECAP1-215ENST00000639071 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.44
NECAP1-215ENST00000639071 UNC13BO14795 1591 aa12.27□□□□□ -0.45
NECAP1-215ENST00000639071 AMER1Q5JTC6 1135 aaPredicted RBP12.26□□□□□ -0.45
NECAP1-215ENST00000639071 WDR7Q9Y4E6 1490 aa12.26□□□□□ -0.45
NECAP1-215ENST00000639071 BCAR3O75815 825 aa12.26□□□□□ -0.45
NECAP1-215ENST00000639071 CENPQQ7L2Z9 268 aaPredicted RBP12.26□□□□□ -0.45
NECAP1-215ENST00000639071 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
NECAP1-215ENST00000639071 APAF1O14727 1248 aa12.25□□□□□ -0.45
NECAP1-215ENST00000639071 USP35Q9P2H5 1018 aa12.25□□□□□ -0.45
NECAP1-215ENST00000639071 NFKBIBQ15653 356 aa12.25□□□□□ -0.45
NECAP1-215ENST00000639071 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.25□□□□□ -0.45
NECAP1-215ENST00000639071 EIF2AK4Q9P2K8 1649 aaKnown RBP12.25□□□□□ -0.45
NECAP1-215ENST00000639071 C8orf34Q49A92 452 aa12.25□□□□□ -0.45
NECAP1-215ENST00000639071 IQGAP3Q86VI3 1631 aa12.24□□□□□ -0.45
NECAP1-215ENST00000639071 FAM161AQ3B820 660 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms