RNA–Protein interactions for RNA: ENST00000638913.1

PAX6-244, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,390 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-244ENST00000638913 RALGAPBQ86X10 1494 aa13.87□□□□□ -0.19
PAX6-244ENST00000638913 POLR1AO95602 1720 aaPredicted RBP13.86□□□□□ -0.19
PAX6-244ENST00000638913 UHRF1BP1Q6BDS2 1440 aa13.86□□□□□ -0.19
PAX6-244ENST00000638913 ARID4BQ4LE39 1312 aaPredicted RBP13.85□□□□□ -0.19
PAX6-244ENST00000638913 CC2D1BQ5T0F9 858 aaKnown RBP13.84□□□□□ -0.19
PAX6-244ENST00000638913 MYBBP1AQ9BQG0 1328 aaKnown RBP13.83□□□□□ -0.2
PAX6-244ENST00000638913 SHANK2Q9UPX8 1470 aa13.82□□□□□ -0.2
PAX6-244ENST00000638913 CCDC144AA2RUR9 1427 aa13.8□□□□□ -0.2
PAX6-244ENST00000638913 RALBP1Q15311 655 aa13.8□□□□□ -0.2
PAX6-244ENST00000638913 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
PAX6-244ENST00000638913 ABCC2Q92887 1545 aa13.79□□□□□ -0.2
PAX6-244ENST00000638913 CCDC141Q6ZP82 1450 aa13.79□□□□□ -0.2
PAX6-244ENST00000638913 SAMD9LQ8IVG5 1584 aa13.79□□□□□ -0.2
PAX6-244ENST00000638913 CDCA7LQ96GN5 454 aa13.78□□□□□ -0.2
PAX6-244ENST00000638913 ARHGEF12Q9NZN5 1544 aa13.78□□□□□ -0.2
PAX6-244ENST00000638913 RNF123Q5XPI4 1314 aa13.78□□□□□ -0.2
PAX6-244ENST00000638913 SYCP2Q9BX26 1530 aa13.77□□□□□ -0.21
PAX6-244ENST00000638913 EXOC6Q8TAG9 804 aa13.77□□□□□ -0.21
PAX6-244ENST00000638913 BRD4O60885 1362 aaPredicted RBP13.77□□□□□ -0.21
PAX6-244ENST00000638913 TTC37Q6PGP7 1564 aa13.77□□□□□ -0.21
PAX6-244ENST00000638913 PRAG1Q86YV5 1406 aa13.77□□□□□ -0.21
PAX6-244ENST00000638913 PANK3Q9H999 370 aa13.76□□□□□ -0.21
PAX6-244ENST00000638913 ARHGAP5Q13017 1502 aa13.76□□□□□ -0.21
PAX6-244ENST00000638913 KDM5DQ9BY66 1539 aa13.76□□□□□ -0.21
PAX6-244ENST00000638913 LRPPRCP42704 1394 aaKnown RBP13.76□□□□□ -0.21
PAX6-244ENST00000638913 KTN1Q86UP2 1357 aaKnown RBP13.76□□□□□ -0.21
PAX6-244ENST00000638913 DISP3Q9P2K9 1392 aa13.76□□□□□ -0.21
PAX6-244ENST00000638913 PLA2R1Q13018 1463 aa13.76□□□□□ -0.21
PAX6-244ENST00000638913 PLEKHH2Q8IVE3 1493 aa13.76□□□□□ -0.21
PAX6-244ENST00000638913 PER1O15534 1290 aaPredicted RBP13.75□□□□□ -0.21
PAX6-244ENST00000638913 NLRP13Q86W25 1043 aa13.75□□□□□ -0.21
PAX6-244ENST00000638913 CDC42BPBQ9Y5S2 1711 aa13.75□□□□□ -0.21
PAX6-244ENST00000638913 PAK3O75914 559 aaPredicted RBP13.75□□□□□ -0.21
PAX6-244ENST00000638913 RRP1P56182 461 aaKnown RBP13.74□□□□□ -0.21
PAX6-244ENST00000638913 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
PAX6-244ENST00000638913 RCAN3Q9UKA8 241 aa13.74□□□□□ -0.21
PAX6-244ENST00000638913 PLIN1O60240 522 aa13.74□□□□□ -0.21
PAX6-244ENST00000638913 ARHGEF5Q12774 1597 aa13.74□□□□□ -0.21
PAX6-244ENST00000638913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.73□□□□□ -0.21
PAX6-244ENST00000638913 TESK2Q96S53 571 aa13.73□□□□□ -0.21
PAX6-244ENST00000638913 ZCCHC11Q5TAX3 1644 aaKnown RBP13.73□□□□□ -0.21
PAX6-244ENST00000638913 PREX2Q70Z35 1606 aa13.73□□□□□ -0.21
PAX6-244ENST00000638913 NBR1Q14596 966 aa13.73□□□□□ -0.21
PAX6-244ENST00000638913 A2MP01023 1474 aa13.73□□□□□ -0.21
PAX6-244ENST00000638913 BCL11AQ9H165 835 aa13.72□□□□□ -0.21
PAX6-244ENST00000638913 PARD3Q8TEW0 1356 aa13.71□□□□□ -0.21
PAX6-244ENST00000638913 NOP58Q9Y2X3 529 aaKnown RBP13.71□□□□□ -0.22
PAX6-244ENST00000638913 NPM2Q86SE8 214 aaKnown RBP13.7□□□□□ -0.22
PAX6-244ENST00000638913 SKAP1Q86WV1 359 aa13.69□□□□□ -0.22
PAX6-244ENST00000638913 TMF1P82094 1093 aa13.69□□□□□ -0.22
PAX6-244ENST00000638913 UHRF1BP1LA0JNW5 1464 aa13.68□□□□□ -0.22
PAX6-244ENST00000638913 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
PAX6-244ENST00000638913 ERBINQ96RT1 1412 aa13.68□□□□□ -0.22
PAX6-244ENST00000638913 AFAP1Q8N556 730 aa13.67□□□□□ -0.22
PAX6-244ENST00000638913 MYT1LQ9UL68 1186 aa13.66□□□□□ -0.22
PAX6-244ENST00000638913 ANP32AP39687 249 aaKnown RBP13.66□□□□□ -0.22
PAX6-244ENST00000638913 E9PCH4 1651 aa13.65□□□□□ -0.22
PAX6-244ENST00000638913 ADAMTS8Q9UP79 889 aa13.65□□□□□ -0.22
PAX6-244ENST00000638913 GPRASP1Q5JY77 1395 aa13.65□□□□□ -0.22
PAX6-244ENST00000638913 COL17A1Q9UMD9 1497 aaPredicted RBP13.65□□□□□ -0.22
PAX6-244ENST00000638913 EFCAB2Q5VUJ9 269 aa13.64□□□□□ -0.23
PAX6-244ENST00000638913 MYO5CQ9NQX4 1742 aa13.64□□□□□ -0.23
PAX6-244ENST00000638913 TRAPPC8Q9Y2L5 1435 aa13.63□□□□□ -0.23
PAX6-244ENST00000638913 IPO9Q96P70 1041 aaKnown RBP13.63□□□□□ -0.23
PAX6-244ENST00000638913 CRBNQ96SW2 442 aa13.63□□□□□ -0.23
PAX6-244ENST00000638913 PDE3BQ13370 1112 aa13.62□□□□□ -0.23
PAX6-244ENST00000638913 C20orf194Q5TEA3 1177 aa13.62□□□□□ -0.23
PAX6-244ENST00000638913 KNSTRNQ9Y448 316 aa13.62□□□□□ -0.23
PAX6-244ENST00000638913 UNC13BO14795 1591 aa13.61□□□□□ -0.23
PAX6-244ENST00000638913 ZBTB47Q9UFB7 747 aaPredicted RBP13.61□□□□□ -0.23
PAX6-244ENST00000638913 SPAG9O60271 1321 aaKnown RBP13.61□□□□□ -0.23
PAX6-244ENST00000638913 PRDM15P57071 1507 aaPredicted RBP13.6□□□□□ -0.23
PAX6-244ENST00000638913 PPP2R1AP30153 589 aa13.59□□□□□ -0.23
PAX6-244ENST00000638913 DEKP35659 375 aaKnown RBP13.59□□□□□ -0.23
PAX6-244ENST00000638913 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
PAX6-244ENST00000638913 DUOX2Q9NRD8 1548 aa13.59□□□□□ -0.23
PAX6-244ENST00000638913 PLCH2O75038 1416 aa13.59□□□□□ -0.23
PAX6-244ENST00000638913 WDR43Q15061 677 aaKnown RBP eCLIP13.59□□□□□ -0.23
PAX6-244ENST00000638913 MAGI2Q86UL8 1455 aa13.58□□□□□ -0.24
PAX6-244ENST00000638913 PDE4AP27815 886 aa13.58□□□□□ -0.24
PAX6-244ENST00000638913 IQGAP3Q86VI3 1631 aa13.58□□□□□ -0.24
PAX6-244ENST00000638913 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
PAX6-244ENST00000638913 MAST1Q9Y2H9 1570 aa13.58□□□□□ -0.24
PAX6-244ENST00000638913 WASHC2CQ9Y4E1 1318 aa13.58□□□□□ -0.24
PAX6-244ENST00000638913 KIF3BO15066 747 aa13.56□□□□□ -0.24
PAX6-244ENST00000638913 WDR7Q9Y4E6 1490 aa13.56□□□□□ -0.24
PAX6-244ENST00000638913 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
PAX6-244ENST00000638913 AMER1Q5JTC6 1135 aaPredicted RBP13.56□□□□□ -0.24
PAX6-244ENST00000638913 BLMP54132 1417 aaPredicted RBP13.56□□□□□ -0.24
PAX6-244ENST00000638913 ABCC1P33527 1531 aa13.55□□□□□ -0.24
PAX6-244ENST00000638913 PLEKHH1Q9ULM0 1364 aa13.55□□□□□ -0.24
PAX6-244ENST00000638913 PLXNC1O60486 1568 aa13.55□□□□□ -0.24
PAX6-244ENST00000638913 CFAP70Q5T0N1 1121 aa13.54□□□□□ -0.24
PAX6-244ENST00000638913 LAS1LQ9Y4W2 734 aaKnown RBP13.53□□□□□ -0.24
PAX6-244ENST00000638913 BACH2Q9BYV9 841 aa13.53□□□□□ -0.24
PAX6-244ENST00000638913 ATP10AO60312 1499 aa13.52□□□□□ -0.24
PAX6-244ENST00000638913 ASXL2Q76L83 1435 aa13.52□□□□□ -0.24
PAX6-244ENST00000638913 EIF2AK4Q9P2K8 1649 aaKnown RBP13.52□□□□□ -0.24
PAX6-244ENST00000638913 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
PAX6-244ENST00000638913 DUSP27Q5VZP5 1158 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms