RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 IQGAP3Q86VI3 1631 aa9.87□□□□□ -0.83
NECAP1-213ENST00000638883 REREQ9P2R6 1566 aa9.86□□□□□ -0.83
NECAP1-213ENST00000638883 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
NECAP1-213ENST00000638883 CDK13Q14004 1512 aaKnown RBP9.85□□□□□ -0.83
NECAP1-213ENST00000638883 DIP2BQ9P265 1576 aa9.85□□□□□ -0.83
NECAP1-213ENST00000638883 CARMIL1Q5VZK9 1371 aa9.85□□□□□ -0.83
NECAP1-213ENST00000638883 DCAF8L1A6NGE4 600 aa9.84□□□□□ -0.83
NECAP1-213ENST00000638883 RANGAP1P46060 587 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-213ENST00000638883 ABCC1P33527 1531 aa9.84□□□□□ -0.83
NECAP1-213ENST00000638883 ARHGEF12Q9NZN5 1544 aa9.84□□□□□ -0.83
NECAP1-213ENST00000638883 ZNF518AQ6AHZ1 1483 aa9.83□□□□□ -0.84
NECAP1-213ENST00000638883 ANP32AP39687 249 aaKnown RBP9.83□□□□□ -0.84
NECAP1-213ENST00000638883 MBD5Q9P267 1494 aa9.83□□□□□ -0.84
NECAP1-213ENST00000638883 TRIM52Q96A61 297 aa9.82□□□□□ -0.84
NECAP1-213ENST00000638883 CAMSAP1Q5T5Y3 1602 aa9.82□□□□□ -0.84
NECAP1-213ENST00000638883 MROH2AA6NES4 1674 aa9.82□□□□□ -0.84
NECAP1-213ENST00000638883 ZBTB47Q9UFB7 747 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-213ENST00000638883 TIMELESSQ9UNS1 1208 aa9.82□□□□□ -0.84
NECAP1-213ENST00000638883 IRX6P78412 446 aaPredicted RBP9.81□□□□□ -0.84
NECAP1-213ENST00000638883 AKNAQ7Z591 1439 aa9.81□□□□□ -0.84
NECAP1-213ENST00000638883 ZMYM4Q5VZL5 1548 aa9.8□□□□□ -0.84
NECAP1-213ENST00000638883 LAMC1P11047 1609 aa9.79□□□□□ -0.84
NECAP1-213ENST00000638883 CCDC18Q5T9S5 1454 aa9.79□□□□□ -0.84
NECAP1-213ENST00000638883 TPRNQ4KMQ1 711 aa9.78□□□□□ -0.84
NECAP1-213ENST00000638883 ZFYVE16Q7Z3T8 1539 aa9.78□□□□□ -0.84
NECAP1-213ENST00000638883 KDM5AP29375 1690 aaKnown RBP9.78□□□□□ -0.84
NECAP1-213ENST00000638883 PTPRGP23470 1445 aa9.77□□□□□ -0.84
NECAP1-213ENST00000638883 SPOCK2Q92563 424 aa9.77□□□□□ -0.84
NECAP1-213ENST00000638883 ATP10BO94823 1461 aa9.77□□□□□ -0.85
NECAP1-213ENST00000638883 SHANK2Q9UPX8 1470 aa9.77□□□□□ -0.85
NECAP1-213ENST00000638883 SPHKAPQ2M3C7 1700 aa9.77□□□□□ -0.85
NECAP1-213ENST00000638883 TDRD9Q8NDG6 1382 aaKnown RBP9.77□□□□□ -0.85
NECAP1-213ENST00000638883 MYO5BQ9ULV0 1848 aa9.75□□□□□ -0.85
NECAP1-213ENST00000638883 NEFMP07197 916 aa9.75□□□□□ -0.85
NECAP1-213ENST00000638883 MYOM1P52179 1685 aa9.75□□□□□ -0.85
NECAP1-213ENST00000638883 PLB1Q6P1J6 1458 aa9.75□□□□□ -0.85
NECAP1-213ENST00000638883 DSG3P32926 999 aa9.75□□□□□ -0.85
NECAP1-213ENST00000638883 KCNH8Q96L42 1107 aa9.75□□□□□ -0.85
NECAP1-213ENST00000638883 PRDM15P57071 1507 aaPredicted RBP9.74□□□□□ -0.85
NECAP1-213ENST00000638883 PHLDB1Q86UU1 1377 aa9.74□□□□□ -0.85
NECAP1-213ENST00000638883 MYO3AQ8NEV4 1616 aa9.73□□□□□ -0.85
NECAP1-213ENST00000638883 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-213ENST00000638883 FHOD3Q2V2M9 1422 aa9.73□□□□□ -0.85
NECAP1-213ENST00000638883 A0A0U1RQG5 324 aaPredicted RBP9.73□□□□□ -0.85
NECAP1-213ENST00000638883 MARF1Q9Y4F3 1742 aaKnown RBP9.72□□□□□ -0.85
NECAP1-213ENST00000638883 IQGAP1P46940 1657 aa9.72□□□□□ -0.85
NECAP1-213ENST00000638883 PPLO60437 1756 aa9.71□□□□□ -0.85
NECAP1-213ENST00000638883 RSPH6AQ9H0K4 717 aa9.71□□□□□ -0.86
NECAP1-213ENST00000638883 HS6ST3Q8IZP7 471 aa9.71□□□□□ -0.86
NECAP1-213ENST00000638883 KIAA1210Q9ULL0 1709 aa9.7□□□□□ -0.86
NECAP1-213ENST00000638883 PAXIP1Q6ZW49 1069 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-213ENST00000638883 NPM2Q86SE8 214 aaKnown RBP9.7□□□□□ -0.86
NECAP1-213ENST00000638883 GPATCH8Q9UKJ3 1502 aaKnown RBP9.7□□□□□ -0.86
NECAP1-213ENST00000638883 ZMYND15Q9H091 742 aa9.7□□□□□ -0.86
NECAP1-213ENST00000638883 PAK3O75914 559 aaPredicted RBP9.69□□□□□ -0.86
NECAP1-213ENST00000638883 ECM2O94769 699 aaPredicted RBP9.69□□□□□ -0.86
NECAP1-213ENST00000638883 TRPM1Q7Z4N2 1603 aa9.69□□□□□ -0.86
NECAP1-213ENST00000638883 DDX10Q13206 875 aaKnown RBP9.69□□□□□ -0.86
NECAP1-213ENST00000638883 CAMSAP2Q08AD1 1489 aa9.68□□□□□ -0.86
NECAP1-213ENST00000638883 KANK4Q5T7N3 995 aaPredicted RBP9.68□□□□□ -0.86
NECAP1-213ENST00000638883 NCOA2Q15596 1464 aa9.68□□□□□ -0.86
NECAP1-213ENST00000638883 LAS1LQ9Y4W2 734 aaKnown RBP9.68□□□□□ -0.86
NECAP1-213ENST00000638883 NRXN3Q9Y4C0 1643 aa9.68□□□□□ -0.86
NECAP1-213ENST00000638883 ANP32CO43423 234 aa9.68□□□□□ -0.86
NECAP1-213ENST00000638883 HECW2Q9P2P5 1572 aa9.67□□□□□ -0.86
NECAP1-213ENST00000638883 WDR7Q9Y4E6 1490 aa9.67□□□□□ -0.86
NECAP1-213ENST00000638883 GTPBP6O43824 516 aaPredicted RBP9.67□□□□□ -0.86
NECAP1-213ENST00000638883 CFAP74Q9C0B2 1584 aa9.67□□□□□ -0.86
NECAP1-213ENST00000638883 NUBP1P53384 320 aa9.66□□□□□ -0.86
NECAP1-213ENST00000638883 LMTK2Q8IWU2 1503 aa9.65□□□□□ -0.86
NECAP1-213ENST00000638883 BRPF3Q9ULD4 1205 aa9.65□□□□□ -0.86
NECAP1-213ENST00000638883 ATP1B4Q9UN42 357 aaPredicted RBP9.65□□□□□ -0.86
NECAP1-213ENST00000638883 DIP2CQ9Y2E4 1556 aa9.65□□□□□ -0.87
NECAP1-213ENST00000638883 PZPP20742 1482 aa9.65□□□□□ -0.87
NECAP1-213ENST00000638883 HNRNPUQ00839 825 aaKnown RBP eCLIP9.64□□□□□ -0.87
NECAP1-213ENST00000638883 PPP4R2Q9NY27 417 aa9.64□□□□□ -0.87
NECAP1-213ENST00000638883 RIMS1Q86UR5 1692 aaKnown RBP9.64□□□□□ -0.87
NECAP1-213ENST00000638883 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
NECAP1-213ENST00000638883 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
NECAP1-213ENST00000638883 IPO9Q96P70 1041 aaKnown RBP9.63□□□□□ -0.87
NECAP1-213ENST00000638883 MADDQ8WXG6 1647 aa9.63□□□□□ -0.87
NECAP1-213ENST00000638883 TET3O43151 1660 aa9.63□□□□□ -0.87
NECAP1-213ENST00000638883 B4GALNT3Q6L9W6 998 aa9.63□□□□□ -0.87
NECAP1-213ENST00000638883 OSCARQ8IYS5 282 aa9.63□□□□□ -0.87
NECAP1-213ENST00000638883 C1QBPQ07021 282 aaKnown RBP9.62□□□□□ -0.87
NECAP1-213ENST00000638883 ATP10AO60312 1499 aa9.62□□□□□ -0.87
NECAP1-213ENST00000638883 FAM135AQ9P2D6 1515 aa9.62□□□□□ -0.87
NECAP1-213ENST00000638883 TEX14Q8IWB6 1497 aa9.61□□□□□ -0.87
NECAP1-213ENST00000638883 TMEM131LA2VDJ0 1609 aa9.61□□□□□ -0.87
NECAP1-213ENST00000638883 HSP90AA2PQ14568 343 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-213ENST00000638883 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
NECAP1-213ENST00000638883 ZNF142P52746 1687 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-213ENST00000638883 NAP1L5Q96NT1 182 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-213ENST00000638883 DUOX2Q9NRD8 1548 aa9.6□□□□□ -0.87
NECAP1-213ENST00000638883 FMN1Q68DA7 1419 aa9.6□□□□□ -0.87
NECAP1-213ENST00000638883 MIA2Q96PC5 1412 aa9.6□□□□□ -0.87
NECAP1-213ENST00000638883 PPM1GO15355 546 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-213ENST00000638883 SYNMO15061 1565 aa9.59□□□□□ -0.87
NECAP1-213ENST00000638883 FGD6Q6ZV73 1430 aa9.59□□□□□ -0.87
NECAP1-213ENST00000638883 HFM1A2PYH4 1435 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms