RNA–Protein interactions for RNA: ENST00000638682.1

LINC02001-202, Transcript of long intergenic non-protein coding RNA 2001, humanhuman

TSL 5 BASIC

Gene LINC02001, Length 1,504 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02001-202ENST00000638682 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
LINC02001-202ENST00000638682 HECW2Q9P2P5 1572 aa16.67■□□□□ 0.26
LINC02001-202ENST00000638682 DNMT1P26358 1616 aaKnown RBP16.67■□□□□ 0.26
LINC02001-202ENST00000638682 CAMSAP2Q08AD1 1489 aa16.67■□□□□ 0.26
LINC02001-202ENST00000638682 PTPRKQ15262 1439 aa16.66■□□□□ 0.26
LINC02001-202ENST00000638682 PLEKHH2Q8IVE3 1493 aa16.66■□□□□ 0.26
LINC02001-202ENST00000638682 ARHGEF12Q9NZN5 1544 aa16.66■□□□□ 0.26
LINC02001-202ENST00000638682 YEATS2Q9ULM3 1422 aa16.65■□□□□ 0.26
LINC02001-202ENST00000638682 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
LINC02001-202ENST00000638682 SETD5Q9C0A6 1442 aa16.64■□□□□ 0.26
LINC02001-202ENST00000638682 C19orf67A6NJJ6 358 aa16.64■□□□□ 0.25
LINC02001-202ENST00000638682 TRAPPC8Q9Y2L5 1435 aa16.64■□□□□ 0.25
LINC02001-202ENST00000638682 CROCC2H7BZ55 1655 aa16.63■□□□□ 0.25
LINC02001-202ENST00000638682 ZNF644Q9H582 1327 aaPredicted RBP16.63■□□□□ 0.25
LINC02001-202ENST00000638682 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
LINC02001-202ENST00000638682 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
LINC02001-202ENST00000638682 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
LINC02001-202ENST00000638682 KDM4FA0A1W2PPD8 638 aa16.61■□□□□ 0.25
LINC02001-202ENST00000638682 MYT1LQ9UL68 1186 aa16.61■□□□□ 0.25
LINC02001-202ENST00000638682 DAPK1P53355 1430 aa16.61■□□□□ 0.25
LINC02001-202ENST00000638682 KIAA1107Q9UPP5 1409 aa16.61■□□□□ 0.25
LINC02001-202ENST00000638682 AFAP1Q8N556 730 aa16.6■□□□□ 0.25
LINC02001-202ENST00000638682 ADGBQ8N7X0 1667 aa16.6■□□□□ 0.25
LINC02001-202ENST00000638682 C9orf84Q5VXU9 1444 aa16.59■□□□□ 0.25
LINC02001-202ENST00000638682 ABCA6Q8N139 1617 aa16.59■□□□□ 0.25
LINC02001-202ENST00000638682 ARID4BQ4LE39 1312 aaPredicted RBP16.59■□□□□ 0.25
LINC02001-202ENST00000638682 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
LINC02001-202ENST00000638682 MLH3Q9UHC1 1453 aa16.59■□□□□ 0.25
LINC02001-202ENST00000638682 HFM1A2PYH4 1435 aa16.58■□□□□ 0.25
LINC02001-202ENST00000638682 ABCC5O15440 1437 aa16.58■□□□□ 0.25
LINC02001-202ENST00000638682 ATP10AO60312 1499 aa16.57■□□□□ 0.24
LINC02001-202ENST00000638682 HNRNPMP52272 730 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC02001-202ENST00000638682 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
LINC02001-202ENST00000638682 INO80Q9ULG1 1556 aaPredicted RBP16.56■□□□□ 0.24
LINC02001-202ENST00000638682 BCORL1Q5H9F3 1711 aa16.56■□□□□ 0.24
LINC02001-202ENST00000638682 SIGLEC1Q9BZZ2 1709 aa16.56■□□□□ 0.24
LINC02001-202ENST00000638682 NAIPQ13075 1403 aa16.55■□□□□ 0.24
LINC02001-202ENST00000638682 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
LINC02001-202ENST00000638682 ATP7AQ04656 1500 aa16.55■□□□□ 0.24
LINC02001-202ENST00000638682 DHX57Q6P158 1386 aaKnown RBP16.55■□□□□ 0.24
LINC02001-202ENST00000638682 KIDINS220Q9ULH0 1771 aa16.55■□□□□ 0.24
LINC02001-202ENST00000638682 ARHGEF5Q12774 1597 aa16.55■□□□□ 0.24
LINC02001-202ENST00000638682 REREQ9P2R6 1566 aa16.54■□□□□ 0.24
LINC02001-202ENST00000638682 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
LINC02001-202ENST00000638682 MBD5Q9P267 1494 aa16.54■□□□□ 0.24
LINC02001-202ENST00000638682 ADAMTSL3P82987 1691 aa16.53■□□□□ 0.24
LINC02001-202ENST00000638682 SPAG9O60271 1321 aaKnown RBP16.53■□□□□ 0.24
LINC02001-202ENST00000638682 ROCK1Q13464 1354 aa16.52■□□□□ 0.24
LINC02001-202ENST00000638682 MADDQ8WXG6 1647 aa16.52■□□□□ 0.23
LINC02001-202ENST00000638682 RRP7BPQ9NSQ0 103 aa16.51■□□□□ 0.23
LINC02001-202ENST00000638682 SHANK2Q9UPX8 1470 aa16.5■□□□□ 0.23
LINC02001-202ENST00000638682 ADGRL2O95490 1459 aa16.49■□□□□ 0.23
LINC02001-202ENST00000638682 RIMS1Q86UR5 1692 aaKnown RBP16.47■□□□□ 0.23
LINC02001-202ENST00000638682 AGLP35573 1532 aa16.47■□□□□ 0.23
LINC02001-202ENST00000638682 MLECQ14165 292 aa16.46■□□□□ 0.23
LINC02001-202ENST00000638682 FER1L4A9Z1Z3 1794 aa16.46■□□□□ 0.23
LINC02001-202ENST00000638682 CLSPNQ9HAW4 1339 aa16.46■□□□□ 0.23
LINC02001-202ENST00000638682 PLXNC1O60486 1568 aa16.45■□□□□ 0.22
LINC02001-202ENST00000638682 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
LINC02001-202ENST00000638682 PTPRMP28827 1452 aa16.45■□□□□ 0.22
LINC02001-202ENST00000638682 MAST1Q9Y2H9 1570 aa16.45■□□□□ 0.22
LINC02001-202ENST00000638682 GABBR2O75899 941 aa16.45■□□□□ 0.22
LINC02001-202ENST00000638682 NCOA1Q15788 1441 aa16.44■□□□□ 0.22
LINC02001-202ENST00000638682 A2MP01023 1474 aa16.44■□□□□ 0.22
LINC02001-202ENST00000638682 RSPH4AQ5TD94 716 aa16.44■□□□□ 0.22
LINC02001-202ENST00000638682 ANKRD30AQ9BXX3 1397 aa16.44■□□□□ 0.22
LINC02001-202ENST00000638682 TSPY4P0CV99 314 aa16.43■□□□□ 0.22
LINC02001-202ENST00000638682 TSPY10P0CW01 314 aa16.43■□□□□ 0.22
LINC02001-202ENST00000638682 ACIN1Q9UKV3 1341 aaKnown RBP16.36■□□□□ 0.21
LINC02001-202ENST00000638682 KIF15Q9NS87 1388 aa16.36■□□□□ 0.21
LINC02001-202ENST00000638682 TRIM52Q96A61 297 aa16.35■□□□□ 0.21
LINC02001-202ENST00000638682 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
LINC02001-202ENST00000638682 DHX29Q7Z478 1369 aaKnown RBP16.35■□□□□ 0.21
LINC02001-202ENST00000638682 ANKRD50Q9ULJ7 1429 aa16.35■□□□□ 0.21
LINC02001-202ENST00000638682 FARP1Q9Y4F1 1045 aaPredicted RBP16.34■□□□□ 0.21
LINC02001-202ENST00000638682 CNTLNQ9NXG0 1405 aa16.33■□□□□ 0.2
LINC02001-202ENST00000638682 EIF2AK4Q9P2K8 1649 aaKnown RBP16.31■□□□□ 0.2
LINC02001-202ENST00000638682 DUOX2Q9NRD8 1548 aa16.31■□□□□ 0.2
LINC02001-202ENST00000638682 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
LINC02001-202ENST00000638682 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
LINC02001-202ENST00000638682 GGT6Q6P531 493 aa16.29■□□□□ 0.2
LINC02001-202ENST00000638682 C3P01024 1663 aa16.29■□□□□ 0.2
LINC02001-202ENST00000638682 CLTCQ00610 1675 aaKnown RBP16.29■□□□□ 0.2
LINC02001-202ENST00000638682 KIF3BO15066 747 aa16.29■□□□□ 0.2
LINC02001-202ENST00000638682 RNF17Q9BXT8 1623 aaKnown RBP16.28■□□□□ 0.2
LINC02001-202ENST00000638682 KDM5DQ9BY66 1539 aa16.27■□□□□ 0.2
LINC02001-202ENST00000638682 FAM135AQ9P2D6 1515 aa16.27■□□□□ 0.2
LINC02001-202ENST00000638682 MPHOSPH9Q99550 1183 aa16.27■□□□□ 0.2
LINC02001-202ENST00000638682 PZPP20742 1482 aa16.27■□□□□ 0.19
LINC02001-202ENST00000638682 ERBINQ96RT1 1412 aa16.26■□□□□ 0.19
LINC02001-202ENST00000638682 UNC13BO14795 1591 aa16.26■□□□□ 0.19
LINC02001-202ENST00000638682 LMTK3Q96Q04 1460 aa16.25■□□□□ 0.19
LINC02001-202ENST00000638682 CEBPAP49715 358 aaPredicted RBP16.24■□□□□ 0.19
LINC02001-202ENST00000638682 SIN3AQ96ST3 1273 aa16.24■□□□□ 0.19
LINC02001-202ENST00000638682 PREX1Q8TCU6 1659 aa16.24■□□□□ 0.19
LINC02001-202ENST00000638682 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
LINC02001-202ENST00000638682 MROH1Q8NDA8 1641 aa16.22■□□□□ 0.19
LINC02001-202ENST00000638682 ZC3H13Q5T200 1668 aaKnown RBP16.22■□□□□ 0.19
LINC02001-202ENST00000638682 CLCN6P51797 869 aa16.22■□□□□ 0.19
LINC02001-202ENST00000638682 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms