RNA–Protein interactions for RNA: ENST00000634620.1

ATP7B-213, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 5,653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-213ENST00000634620 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
ATP7B-213ENST00000634620 ZNF330Q9Y3S2 320 aaPredicted RBP13.93□□□□□ -0.18
ATP7B-213ENST00000634620 L1TD1Q5T7N2 865 aaKnown RBP13.93□□□□□ -0.18
ATP7B-213ENST00000634620 HDGFL2Q7Z4V5 671 aaPredicted RBP13.93□□□□□ -0.18
ATP7B-213ENST00000634620 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
ATP7B-213ENST00000634620 RGS3P49796 1198 aa13.92□□□□□ -0.18
ATP7B-213ENST00000634620 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
ATP7B-213ENST00000634620 PDE3BQ13370 1112 aa13.92□□□□□ -0.18
ATP7B-213ENST00000634620 NUDCQ9Y266 331 aa13.92□□□□□ -0.18
ATP7B-213ENST00000634620 AMER1Q5JTC6 1135 aaPredicted RBP13.91□□□□□ -0.18
ATP7B-213ENST00000634620 EFCAB5A4FU69 1503 aa13.91□□□□□ -0.18
ATP7B-213ENST00000634620 RAPGEF3O95398 923 aa13.91□□□□□ -0.18
ATP7B-213ENST00000634620 SYNJ2O15056 1496 aa13.9□□□□□ -0.18
ATP7B-213ENST00000634620 CASC1Q6TDU7 716 aa13.9□□□□□ -0.18
ATP7B-213ENST00000634620 MAPK8IP3Q9UPT6 1336 aa13.9□□□□□ -0.18
ATP7B-213ENST00000634620 UACAQ9BZF9 1416 aa13.9□□□□□ -0.18
ATP7B-213ENST00000634620 LMTK3Q96Q04 1460 aa13.9□□□□□ -0.19
ATP7B-213ENST00000634620 CD109Q6YHK3 1445 aa13.89□□□□□ -0.19
ATP7B-213ENST00000634620 NEUROD2Q15784 382 aa13.89□□□□□ -0.19
ATP7B-213ENST00000634620 SYTL4Q96C24 671 aaPredicted RBP13.89□□□□□ -0.19
ATP7B-213ENST00000634620 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
ATP7B-213ENST00000634620 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
ATP7B-213ENST00000634620 NCOA2Q15596 1464 aa13.88□□□□□ -0.19
ATP7B-213ENST00000634620 FTSJ3Q8IY81 847 aaKnown RBP13.88□□□□□ -0.19
ATP7B-213ENST00000634620 AKNAQ7Z591 1439 aa13.88□□□□□ -0.19
ATP7B-213ENST00000634620 HSP90AB1P08238 724 aaKnown RBP13.87□□□□□ -0.19
ATP7B-213ENST00000634620 EIF3AQ14152 1382 aaKnown RBP13.86□□□□□ -0.19
ATP7B-213ENST00000634620 CHAF1AQ13111 956 aaPredicted RBP13.86□□□□□ -0.19
ATP7B-213ENST00000634620 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
ATP7B-213ENST00000634620 PEG3Q9GZU2 1588 aa13.86□□□□□ -0.19
ATP7B-213ENST00000634620 TIAM1Q13009 1591 aa13.85□□□□□ -0.19
ATP7B-213ENST00000634620 HSPA2P54652 639 aa13.84□□□□□ -0.19
ATP7B-213ENST00000634620 GOLGA6L6A8MZA4 724 aa13.84□□□□□ -0.19
ATP7B-213ENST00000634620 MORC1Q86VD1 984 aa13.84□□□□□ -0.19
ATP7B-213ENST00000634620 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
ATP7B-213ENST00000634620 NBPF8Q3BBV2 869 aa13.84□□□□□ -0.19
ATP7B-213ENST00000634620 NBPF14Q5TI25 921 aa13.84□□□□□ -0.19
ATP7B-213ENST00000634620 PNNQ9H307 717 aaKnown RBP13.84□□□□□ -0.19
ATP7B-213ENST00000634620 KIF15Q9NS87 1388 aa13.83□□□□□ -0.2
ATP7B-213ENST00000634620 MS4A1P11836 297 aa13.83□□□□□ -0.2
ATP7B-213ENST00000634620 CCDC144AA2RUR9 1427 aa13.83□□□□□ -0.2
ATP7B-213ENST00000634620 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
ATP7B-213ENST00000634620 C16orf71Q8IYS4 520 aaPredicted RBP13.82□□□□□ -0.2
ATP7B-213ENST00000634620 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
ATP7B-213ENST00000634620 PLB1Q6P1J6 1458 aa13.82□□□□□ -0.2
ATP7B-213ENST00000634620 RCAN3Q9UKA8 241 aa13.82□□□□□ -0.2
ATP7B-213ENST00000634620 POLA1P09884 1462 aaPredicted RBP13.81□□□□□ -0.2
ATP7B-213ENST00000634620 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
ATP7B-213ENST00000634620 EHBP1L1Q8N3D4 1523 aa13.8□□□□□ -0.2
ATP7B-213ENST00000634620 U2SURPO15042 1029 aaKnown RBP13.8□□□□□ -0.2
ATP7B-213ENST00000634620 ADAMTS2O95450 1211 aa13.8□□□□□ -0.2
ATP7B-213ENST00000634620 NLRP13Q86W25 1043 aa13.8□□□□□ -0.2
ATP7B-213ENST00000634620 USP47Q96K76 1375 aa13.8□□□□□ -0.2
ATP7B-213ENST00000634620 HSCBQ8IWL3 235 aa13.8□□□□□ -0.2
ATP7B-213ENST00000634620 ESCO1Q5FWF5 840 aa13.8□□□□□ -0.2
ATP7B-213ENST00000634620 PRKRIP1Q9H875 184 aaPredicted RBP13.8□□□□□ -0.2
ATP7B-213ENST00000634620 MAGI1Q96QZ7 1491 aaPredicted RBP13.8□□□□□ -0.2
ATP7B-213ENST00000634620 GPRASP1Q5JY77 1395 aa13.8□□□□□ -0.2
ATP7B-213ENST00000634620 NRDCO43847 1150 aa13.79□□□□□ -0.2
ATP7B-213ENST00000634620 AMPHP49418 695 aa13.79□□□□□ -0.2
ATP7B-213ENST00000634620 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
ATP7B-213ENST00000634620 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
ATP7B-213ENST00000634620 MYBBP1AQ9BQG0 1328 aaKnown RBP13.78□□□□□ -0.2
ATP7B-213ENST00000634620 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
ATP7B-213ENST00000634620 ST20-MTHFSA0A0A6YYL1 179 aa13.77□□□□□ -0.2
ATP7B-213ENST00000634620 USP35Q9P2H5 1018 aa13.77□□□□□ -0.21
ATP7B-213ENST00000634620 UNC13AQ9UPW8 1703 aa13.77□□□□□ -0.21
ATP7B-213ENST00000634620 STRN4Q9NRL3 753 aa13.77□□□□□ -0.21
ATP7B-213ENST00000634620 ZNF644Q9H582 1327 aaPredicted RBP13.75□□□□□ -0.21
ATP7B-213ENST00000634620 ARID3AQ99856 593 aa13.75□□□□□ -0.21
ATP7B-213ENST00000634620 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
ATP7B-213ENST00000634620 LTV1Q96GA3 475 aaPredicted RBP13.75□□□□□ -0.21
ATP7B-213ENST00000634620 ZBED9Q6R2W3 1325 aa13.74□□□□□ -0.21
ATP7B-213ENST00000634620 RTF1Q92541 710 aaKnown RBP13.74□□□□□ -0.21
ATP7B-213ENST00000634620 HECW1Q76N89 1606 aa13.74□□□□□ -0.21
ATP7B-213ENST00000634620 BIVM-ERCC5R4GMW8 1640 aa13.74□□□□□ -0.21
ATP7B-213ENST00000634620 ABCA10Q8WWZ4 1543 aa13.73□□□□□ -0.21
ATP7B-213ENST00000634620 PAXIP1Q6ZW49 1069 aaPredicted RBP13.73□□□□□ -0.21
ATP7B-213ENST00000634620 CEBPAP49715 358 aaPredicted RBP13.73□□□□□ -0.21
ATP7B-213ENST00000634620 CCDC7Q96M83 1385 aa13.73□□□□□ -0.21
ATP7B-213ENST00000634620 AFAP1Q8N556 730 aa13.73□□□□□ -0.21
ATP7B-213ENST00000634620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.21
ATP7B-213ENST00000634620 ARHGAP5Q13017 1502 aa13.72□□□□□ -0.21
ATP7B-213ENST00000634620 HFM1A2PYH4 1435 aa13.72□□□□□ -0.21
ATP7B-213ENST00000634620 MIA2Q96PC5 1412 aa13.72□□□□□ -0.21
ATP7B-213ENST00000634620 CNTLNQ9NXG0 1405 aa13.72□□□□□ -0.21
ATP7B-213ENST00000634620 TCERG1O14776 1098 aaKnown RBP13.71□□□□□ -0.21
ATP7B-213ENST00000634620 MSH6P52701 1360 aa13.71□□□□□ -0.21
ATP7B-213ENST00000634620 ANKRD50Q9ULJ7 1429 aa13.71□□□□□ -0.22
ATP7B-213ENST00000634620 SUPT6HQ7KZ85 1726 aaKnown RBP13.7□□□□□ -0.22
ATP7B-213ENST00000634620 DRC7Q8IY82 874 aa13.7□□□□□ -0.22
ATP7B-213ENST00000634620 GOLGA6L4A6NEF3 574 aa13.7□□□□□ -0.22
ATP7B-213ENST00000634620 TERF2IPQ9NYB0 399 aa13.7□□□□□ -0.22
ATP7B-213ENST00000634620 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
ATP7B-213ENST00000634620 CUL7Q14999 1698 aa13.7□□□□□ -0.22
ATP7B-213ENST00000634620 CWC22Q9HCG8 908 aaKnown RBP13.7□□□□□ -0.22
ATP7B-213ENST00000634620 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
ATP7B-213ENST00000634620 BCL11BQ9C0K0 894 aaPredicted RBP13.7□□□□□ -0.22
ATP7B-213ENST00000634620 PANK3Q9H999 370 aa13.7□□□□□ -0.22
ATP7B-213ENST00000634620 MAP3K1Q13233 1512 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms