RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 RICTORQ6R327 1708 aa5.64□□□□□ -1.51
SCARNA4.1-201ENST00000628597 AATKQ6ZMQ8 1374 aa5.64□□□□□ -1.51
SCARNA4.1-201ENST00000628597 A2ML1A8K2U0 1454 aa5.64□□□□□ -1.51
SCARNA4.1-201ENST00000628597 LRRC9Q6ZRR7 1453 aa5.64□□□□□ -1.51
SCARNA4.1-201ENST00000628597 PLEKHD1A6NEE1 506 aa5.63□□□□□ -1.51
SCARNA4.1-201ENST00000628597 FAM161AQ3B820 660 aa5.63□□□□□ -1.51
SCARNA4.1-201ENST00000628597 AGLP35573 1532 aa5.63□□□□□ -1.51
SCARNA4.1-201ENST00000628597 ADAMTS2O95450 1211 aa5.62□□□□□ -1.51
SCARNA4.1-201ENST00000628597 APLP1P51693 650 aa5.62□□□□□ -1.51
SCARNA4.1-201ENST00000628597 IGF1RP08069 1367 aa5.62□□□□□ -1.51
SCARNA4.1-201ENST00000628597 TMEM94Q12767 1356 aa5.62□□□□□ -1.51
SCARNA4.1-201ENST00000628597 RTEL1-TNFRSF6BF6WH68 1400 aa5.62□□□□□ -1.51
SCARNA4.1-201ENST00000628597 KDM5DQ9BY66 1539 aa5.62□□□□□ -1.51
SCARNA4.1-201ENST00000628597 SYNMO15061 1565 aa5.62□□□□□ -1.51
SCARNA4.1-201ENST00000628597 ROBO1Q9Y6N7 1651 aa5.62□□□□□ -1.51
SCARNA4.1-201ENST00000628597 KCNQ2O43526 872 aa5.61□□□□□ -1.51
SCARNA4.1-201ENST00000628597 ATP10BO94823 1461 aa5.61□□□□□ -1.51
SCARNA4.1-201ENST00000628597 MSH6P52701 1360 aa5.61□□□□□ -1.51
SCARNA4.1-201ENST00000628597 IQGAP2Q13576 1575 aa5.61□□□□□ -1.51
SCARNA4.1-201ENST00000628597 AFAP1Q8N556 730 aa5.61□□□□□ -1.51
SCARNA4.1-201ENST00000628597 SUPT6HQ7KZ85 1726 aaKnown RBP5.6□□□□□ -1.51
SCARNA4.1-201ENST00000628597 CEP350Q5VT06 3117 aa5.6□□□□□ -1.51
SCARNA4.1-201ENST00000628597 EN1Q05925 392 aaPredicted RBP5.6□□□□□ -1.51
SCARNA4.1-201ENST00000628597 EFCAB2Q5VUJ9 269 aa5.6□□□□□ -1.51
SCARNA4.1-201ENST00000628597 PHLPP1O60346 1717 aa5.6□□□□□ -1.51
SCARNA4.1-201ENST00000628597 NEURL4Q96JN8 1562 aa5.59□□□□□ -1.51
SCARNA4.1-201ENST00000628597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.59□□□□□ -1.51
SCARNA4.1-201ENST00000628597 MED14O60244 1454 aa5.59□□□□□ -1.51
SCARNA4.1-201ENST00000628597 SCAF11Q99590 1463 aaKnown RBP5.59□□□□□ -1.51
SCARNA4.1-201ENST00000628597 CARMIL1Q5VZK9 1371 aa5.59□□□□□ -1.51
SCARNA4.1-201ENST00000628597 MLLT1Q03111 559 aaPredicted RBP5.58□□□□□ -1.52
SCARNA4.1-201ENST00000628597 NBPF8Q3BBV2 869 aa5.58□□□□□ -1.52
SCARNA4.1-201ENST00000628597 NBPF14Q5TI25 921 aa5.58□□□□□ -1.52
SCARNA4.1-201ENST00000628597 GGT6Q6P531 493 aa5.58□□□□□ -1.52
SCARNA4.1-201ENST00000628597 LRRC59Q96AG4 307 aaKnown RBP5.58□□□□□ -1.52
SCARNA4.1-201ENST00000628597 MYO3AQ8NEV4 1616 aa5.58□□□□□ -1.52
SCARNA4.1-201ENST00000628597 CFAP74Q9C0B2 1584 aa5.58□□□□□ -1.52
SCARNA4.1-201ENST00000628597 ZNF142P52746 1687 aaPredicted RBP5.57□□□□□ -1.52
SCARNA4.1-201ENST00000628597 ADRA2BP18089 450 aa5.57□□□□□ -1.52
SCARNA4.1-201ENST00000628597 DNAJC5GQ8N7S2 189 aa5.57□□□□□ -1.52
SCARNA4.1-201ENST00000628597 GJD4Q96KN9 370 aaPredicted RBP5.57□□□□□ -1.52
SCARNA4.1-201ENST00000628597 GPBP1L1Q9HC44 474 aaPredicted RBP5.57□□□□□ -1.52
SCARNA4.1-201ENST00000628597 FAM135AQ9P2D6 1515 aa5.57□□□□□ -1.52
SCARNA4.1-201ENST00000628597 TNRQ92752 1358 aa5.56□□□□□ -1.52
SCARNA4.1-201ENST00000628597 DNMT1P26358 1616 aaKnown RBP5.56□□□□□ -1.52
SCARNA4.1-201ENST00000628597 KCNA6P17658 529 aa5.56□□□□□ -1.52
SCARNA4.1-201ENST00000628597 GPR162Q16538 588 aa5.56□□□□□ -1.52
SCARNA4.1-201ENST00000628597 C14orf37Q86TY3 774 aa5.56□□□□□ -1.52
SCARNA4.1-201ENST00000628597 PIAS4Q8N2W9 510 aaPredicted RBP5.56□□□□□ -1.52
SCARNA4.1-201ENST00000628597 ABCC1P33527 1531 aa5.55□□□□□ -1.52
SCARNA4.1-201ENST00000628597 UGGT2Q9NYU1 1516 aa5.55□□□□□ -1.52
SCARNA4.1-201ENST00000628597 FNBP4Q8N3X1 1017 aaPredicted RBP5.55□□□□□ -1.52
SCARNA4.1-201ENST00000628597 KDM5CP41229 1560 aa5.55□□□□□ -1.52
SCARNA4.1-201ENST00000628597 ZNF518AQ6AHZ1 1483 aa5.54□□□□□ -1.52
SCARNA4.1-201ENST00000628597 RALGAPBQ86X10 1494 aa5.54□□□□□ -1.52
SCARNA4.1-201ENST00000628597 GOLGA3Q08378 1498 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 COL16A1Q07092 1604 aaPredicted RBP5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 MSH5O43196 834 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 ATF3P18847 181 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 HNRNPMP52272 730 aaKnown RBP eCLIP5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 EZH2Q15910 746 aaKnown RBP5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 FBXO31Q5XUX0 539 aaPredicted RBP5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 KRT27Q7Z3Y8 459 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 CADPS2Q86UW7 1296 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 TXNDC2Q86VQ3 553 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 JMYQ8N9B5 988 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 KLRG1Q96E93 195 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 EID1Q9Y6B2 187 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 PLCH2O75038 1416 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 ATRNO75882 1429 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 TNS2Q63HR2 1409 aa5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 POLR1AO95602 1720 aaPredicted RBP5.53□□□□□ -1.52
SCARNA4.1-201ENST00000628597 KIF27Q86VH2 1401 aa5.52□□□□□ -1.53
SCARNA4.1-201ENST00000628597 SEPT12Q8IYM1 358 aa5.52□□□□□ -1.53
SCARNA4.1-201ENST00000628597 SYT17Q9BSW7 474 aa5.52□□□□□ -1.53
SCARNA4.1-201ENST00000628597 REREQ9P2R6 1566 aa5.51□□□□□ -1.53
SCARNA4.1-201ENST00000628597 A0A0G2JS52 829 aa5.51□□□□□ -1.53
SCARNA4.1-201ENST00000628597 PPP1R15AO75807 674 aaPredicted RBP5.51□□□□□ -1.53
SCARNA4.1-201ENST00000628597 MYT1Q01538 1121 aa5.51□□□□□ -1.53
SCARNA4.1-201ENST00000628597 STRCP1A6NGW2 1772 aa5.51□□□□□ -1.53
SCARNA4.1-201ENST00000628597 IQGAP1P46940 1657 aa5.5□□□□□ -1.53
SCARNA4.1-201ENST00000628597 DEPDC5O75140 1603 aa5.5□□□□□ -1.53
SCARNA4.1-201ENST00000628597 P3H3Q8IVL6 736 aa5.5□□□□□ -1.53
SCARNA4.1-201ENST00000628597 PELP1Q8IZL8 1130 aaKnown RBP5.5□□□□□ -1.53
SCARNA4.1-201ENST00000628597 MROH2AA6NES4 1674 aa5.5□□□□□ -1.53
SCARNA4.1-201ENST00000628597 SHPRHQ149N8 1683 aa5.5□□□□□ -1.53
SCARNA4.1-201ENST00000628597 USP19O94966 1318 aa5.49□□□□□ -1.53
SCARNA4.1-201ENST00000628597 DLL1O00548 723 aa5.49□□□□□ -1.53
SCARNA4.1-201ENST00000628597 HSPA1AP0DMV8 641 aaKnown RBP5.49□□□□□ -1.53
SCARNA4.1-201ENST00000628597 HSPA1BP0DMV9 641 aaKnown RBP5.49□□□□□ -1.53
SCARNA4.1-201ENST00000628597 ZNF526Q8TF50 670 aaPredicted RBP5.49□□□□□ -1.53
SCARNA4.1-201ENST00000628597 FHDC1Q9C0D6 1143 aaPredicted RBP5.49□□□□□ -1.53
SCARNA4.1-201ENST00000628597 ARHGAP23Q9P227 1491 aa5.49□□□□□ -1.53
SCARNA4.1-201ENST00000628597 MLH3Q9UHC1 1453 aa5.49□□□□□ -1.53
SCARNA4.1-201ENST00000628597 UGGT1Q9NYU2 1555 aa5.49□□□□□ -1.53
SCARNA4.1-201ENST00000628597 DIP2CQ9Y2E4 1556 aa5.49□□□□□ -1.53
SCARNA4.1-201ENST00000628597 ATP7AQ04656 1500 aa5.48□□□□□ -1.53
SCARNA4.1-201ENST00000628597 CAMTA1Q9Y6Y1 1673 aa5.48□□□□□ -1.53
SCARNA4.1-201ENST00000628597 BRINP3Q76B58 766 aa5.48□□□□□ -1.53
SCARNA4.1-201ENST00000628597 BCANQ96GW7 911 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms