RNA–Protein interactions for RNA: ENST00000626061.2

SNAP23-222, Transcript of synaptosome associated protein 23, human

TSL 5 BASIC

Gene SNAP23, Length 237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP23-222	ENST00000626061	FGD6	Q6ZV73	1430 aa		11.9	□□□□□ -0.5
SNAP23-222	ENST00000626061	QTRT2	Q9H974	415 aa	Known RBP	11.9	□□□□□ -0.5
SNAP23-222	ENST00000626061	PRELP	P51888	382 aa		11.89	□□□□□ -0.51
SNAP23-222	ENST00000626061	LRRC9	Q6ZRR7	1453 aa		11.89	□□□□□ -0.51
SNAP23-222	ENST00000626061	DIP2C	Q9Y2E4	1556 aa		11.88	□□□□□ -0.51
SNAP23-222	ENST00000626061	CARMIL1	Q5VZK9	1371 aa		11.88	□□□□□ -0.51
SNAP23-222	ENST00000626061	BCL9L	Q86UU0	1499 aa		11.88	□□□□□ -0.51
SNAP23-222	ENST00000626061	MED14	O60244	1454 aa		11.87	□□□□□ -0.51
SNAP23-222	ENST00000626061	IQGAP1	P46940	1657 aa		11.85	□□□□□ -0.51
SNAP23-222	ENST00000626061	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	11.85	□□□□□ -0.51
SNAP23-222	ENST00000626061	HNRNPUL2	Q1KMD3	747 aa	Known RBP	11.85	□□□□□ -0.51
SNAP23-222	ENST00000626061	COL16A1	Q07092	1604 aa	Predicted RBP	11.85	□□□□□ -0.51
SNAP23-222	ENST00000626061	DEFB132	Q7Z7B7	95 aa		11.84	□□□□□ -0.51
SNAP23-222	ENST00000626061	BLM	P54132	1417 aa	Predicted RBP	11.84	□□□□□ -0.51
SNAP23-222	ENST00000626061	XIRP1	Q702N8	1843 aa	Known RBP	11.83	□□□□□ -0.51
SNAP23-222	ENST00000626061	GIGYF1	O75420	1035 aa	Predicted RBP	11.83	□□□□□ -0.52
SNAP23-222	ENST00000626061	DEPDC5	O75140	1603 aa		11.82	□□□□□ -0.52
SNAP23-222	ENST00000626061	KDM5D	Q9BY66	1539 aa		11.82	□□□□□ -0.52
SNAP23-222	ENST00000626061	GOLGA3	Q08378	1498 aa		11.82	□□□□□ -0.52
SNAP23-222	ENST00000626061	ZNF518A	Q6AHZ1	1483 aa		11.82	□□□□□ -0.52
SNAP23-222	ENST00000626061	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.81	□□□□□ -0.52
SNAP23-222	ENST00000626061	SHPRH	Q149N8	1683 aa		11.81	□□□□□ -0.52
SNAP23-222	ENST00000626061	EP400	Q96L91	3159 aa		11.8	□□□□□ -0.52
SNAP23-222	ENST00000626061	KIF27	Q86VH2	1401 aa		11.8	□□□□□ -0.52
SNAP23-222	ENST00000626061	ABCA6	Q8N139	1617 aa		11.8	□□□□□ -0.52
SNAP23-222	ENST00000626061	SF3B2	Q13435	895 aa	Known RBP	11.8	□□□□□ -0.52
SNAP23-222	ENST00000626061	ABCC1	P33527	1531 aa		11.8	□□□□□ -0.52
SNAP23-222	ENST00000626061	C8orf37	Q96NL8	207 aa		11.77	□□□□□ -0.53
SNAP23-222	ENST00000626061	CLTC	Q00610	1675 aa	Known RBP	11.77	□□□□□ -0.53
SNAP23-222	ENST00000626061	ITSN2	Q9NZM3	1697 aa		11.75	□□□□□ -0.53
SNAP23-222	ENST00000626061	PLCH2	O75038	1416 aa		11.75	□□□□□ -0.53
SNAP23-222	ENST00000626061	TNS4	Q8IZW8	715 aa		11.74	□□□□□ -0.53
SNAP23-222	ENST00000626061	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.74	□□□□□ -0.53
SNAP23-222	ENST00000626061	TMEM94	Q12767	1356 aa		11.73	□□□□□ -0.53
SNAP23-222	ENST00000626061	AFAP1	Q8N556	730 aa		11.73	□□□□□ -0.53
SNAP23-222	ENST00000626061	KIF14	Q15058	1648 aa		11.72	□□□□□ -0.53
SNAP23-222	ENST00000626061	FAM135A	Q9P2D6	1515 aa		11.71	□□□□□ -0.53
SNAP23-222	ENST00000626061	SCAF11	Q99590	1463 aa	Known RBP	11.71	□□□□□ -0.53
SNAP23-222	ENST00000626061	R3HDM1	Q15032	1099 aa	Known RBP	11.71	□□□□□ -0.53
SNAP23-222	ENST00000626061	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.71	□□□□□ -0.53
SNAP23-222	ENST00000626061	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.7	□□□□□ -0.54
SNAP23-222	ENST00000626061	NINL	Q9Y2I6	1382 aa		11.7	□□□□□ -0.54
SNAP23-222	ENST00000626061	SLAIN2	Q9P270	581 aa		11.7	□□□□□ -0.54
SNAP23-222	ENST00000626061	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.7	□□□□□ -0.54
SNAP23-222	ENST00000626061	PLEKHD1	A6NEE1	506 aa		11.69	□□□□□ -0.54
SNAP23-222	ENST00000626061	ATP7A	Q04656	1500 aa		11.69	□□□□□ -0.54
SNAP23-222	ENST00000626061	MLH3	Q9UHC1	1453 aa		11.69	□□□□□ -0.54
SNAP23-222	ENST00000626061	TNR	Q92752	1358 aa		11.68	□□□□□ -0.54
SNAP23-222	ENST00000626061	MAP3K1	Q13233	1512 aa		11.68	□□□□□ -0.54
SNAP23-222	ENST00000626061	CAMTA1	Q9Y6Y1	1673 aa		11.68	□□□□□ -0.54
SNAP23-222	ENST00000626061	TRPC5	Q9UL62	973 aa	Predicted RBP	11.67	□□□□□ -0.54
SNAP23-222	ENST00000626061	ZC3H13	Q5T200	1668 aa	Known RBP	11.67	□□□□□ -0.54
SNAP23-222	ENST00000626061	UGGT1	Q9NYU2	1555 aa		11.67	□□□□□ -0.54
SNAP23-222	ENST00000626061	EFCAB2	Q5VUJ9	269 aa		11.66	□□□□□ -0.54
SNAP23-222	ENST00000626061	MSH6	P52701	1360 aa		11.66	□□□□□ -0.54
SNAP23-222	ENST00000626061	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.64	□□□□□ -0.55
SNAP23-222	ENST00000626061	ADGB	Q8N7X0	1667 aa		11.63	□□□□□ -0.55
SNAP23-222	ENST00000626061	HSPA6	P17066	643 aa		11.63	□□□□□ -0.55
SNAP23-222	ENST00000626061	BAG6	P46379	1132 aa		11.63	□□□□□ -0.55
SNAP23-222	ENST00000626061	USP21	Q9UK80	565 aa		11.62	□□□□□ -0.55
SNAP23-222	ENST00000626061	UNC13B	O14795	1591 aa		11.62	□□□□□ -0.55
SNAP23-222	ENST00000626061	TIAM1	Q13009	1591 aa		11.62	□□□□□ -0.55
SNAP23-222	ENST00000626061	DIP2A	Q14689	1571 aa		11.61	□□□□□ -0.55
SNAP23-222	ENST00000626061	CHD4	Q14839	1912 aa		11.6	□□□□□ -0.55
SNAP23-222	ENST00000626061	PROSER2	Q86WR7	435 aa	Predicted RBP	11.6	□□□□□ -0.55
SNAP23-222	ENST00000626061	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
SNAP23-222	ENST00000626061	ABCC3	O15438	1527 aa		11.59	□□□□□ -0.55
SNAP23-222	ENST00000626061	NLRP1	Q9C000	1473 aa		11.58	□□□□□ -0.56
SNAP23-222	ENST00000626061	ATRN	O75882	1429 aa		11.58	□□□□□ -0.56
SNAP23-222	ENST00000626061	NUP153	P49790	1475 aa	Known RBP	11.57	□□□□□ -0.56
SNAP23-222	ENST00000626061	CTTNBP2	Q8WZ74	1663 aa		11.56	□□□□□ -0.56
SNAP23-222	ENST00000626061	GGT6	Q6P531	493 aa		11.56	□□□□□ -0.56
SNAP23-222	ENST00000626061	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.55	□□□□□ -0.56
SNAP23-222	ENST00000626061	ARHGAP23	Q9P227	1491 aa		11.55	□□□□□ -0.56
SNAP23-222	ENST00000626061	PRDM15	P57071	1507 aa	Predicted RBP	11.55	□□□□□ -0.56
SNAP23-222	ENST00000626061	MYO5C	Q9NQX4	1742 aa		11.55	□□□□□ -0.56
SNAP23-222	ENST00000626061	KIDINS220	Q9ULH0	1771 aa		11.54	□□□□□ -0.56
SNAP23-222	ENST00000626061	ADAMTS2	O95450	1211 aa		11.54	□□□□□ -0.56
SNAP23-222	ENST00000626061	RALGAPB	Q86X10	1494 aa		11.54	□□□□□ -0.56
SNAP23-222	ENST00000626061	P3H3	Q8IVL6	736 aa		11.53	□□□□□ -0.56
SNAP23-222	ENST00000626061	SPON1	Q9HCB6	807 aa		11.53	□□□□□ -0.56
SNAP23-222	ENST00000626061	ARHGAP5	Q13017	1502 aa		11.51	□□□□□ -0.57
SNAP23-222	ENST00000626061	KCNA6	P17658	529 aa		11.51	□□□□□ -0.57
SNAP23-222	ENST00000626061	WWC3	Q9ULE0	1092 aa		11.51	□□□□□ -0.57
SNAP23-222	ENST00000626061	KDM5A	P29375	1690 aa	Known RBP	11.51	□□□□□ -0.57
SNAP23-222	ENST00000626061	UTRN	P46939	3433 aa		11.5	□□□□□ -0.57
SNAP23-222	ENST00000626061	MIA2	Q96PC5	1412 aa		11.5	□□□□□ -0.57
SNAP23-222	ENST00000626061	SETD5	Q9C0A6	1442 aa		11.5	□□□□□ -0.57
SNAP23-222	ENST00000626061	PZP	P20742	1482 aa		11.5	□□□□□ -0.57
SNAP23-222	ENST00000626061	EN1	Q05925	392 aa	Predicted RBP	11.49	□□□□□ -0.57
SNAP23-222	ENST00000626061	NKTR	P30414	1462 aa	Known RBP	11.49	□□□□□ -0.57
SNAP23-222	ENST00000626061	SPHKAP	Q2M3C7	1700 aa		11.49	□□□□□ -0.57
SNAP23-222	ENST00000626061	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.47	□□□□□ -0.57
SNAP23-222	ENST00000626061	PNPLA6	Q8IY17	1366 aa		11.46	□□□□□ -0.57
SNAP23-222	ENST00000626061	LRRC59	Q96AG4	307 aa	Known RBP	11.46	□□□□□ -0.57
SNAP23-222	ENST00000626061	GJD4	Q96KN9	370 aa	Predicted RBP	11.46	□□□□□ -0.57
SNAP23-222	ENST00000626061	KCNQ2	O43526	872 aa		11.45	□□□□□ -0.58
SNAP23-222	ENST00000626061	TNS2	Q63HR2	1409 aa		11.44	□□□□□ -0.58
SNAP23-222	ENST00000626061	AATK	Q6ZMQ8	1374 aa		11.44	□□□□□ -0.58
SNAP23-222	ENST00000626061	FAM83G	A6ND36	823 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms