RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 RNF17Q9BXT8 1623 aaKnown RBP21.47■■□□□ 1.03
GTF3C2-214ENST00000622534 KIF3BO15066 747 aa21.45■■□□□ 1.02
GTF3C2-214ENST00000622534 PRDM15P57071 1507 aaPredicted RBP21.44■■□□□ 1.02
GTF3C2-214ENST00000622534 MROH1Q8NDA8 1641 aa21.43■■□□□ 1.02
GTF3C2-214ENST00000622534 TRIM52Q96A61 297 aa21.43■■□□□ 1.02
GTF3C2-214ENST00000622534 NUP155O75694 1391 aa21.42■■□□□ 1.02
GTF3C2-214ENST00000622534 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
GTF3C2-214ENST00000622534 VWDEQ8N2E2 1590 aa21.42■■□□□ 1.02
GTF3C2-214ENST00000622534 PZPP20742 1482 aa21.41■■□□□ 1.02
GTF3C2-214ENST00000622534 IQGAP3Q86VI3 1631 aa21.41■■□□□ 1.02
GTF3C2-214ENST00000622534 SIGLEC1Q9BZZ2 1709 aa21.4■■□□□ 1.02
GTF3C2-214ENST00000622534 KANK1Q14678 1352 aa21.39■■□□□ 1.01
GTF3C2-214ENST00000622534 PPP6R1Q9UPN7 881 aa21.39■■□□□ 1.01
GTF3C2-214ENST00000622534 FAM135AQ9P2D6 1515 aa21.38■■□□□ 1.01
GTF3C2-214ENST00000622534 MPHOSPH9Q99550 1183 aa21.37■■□□□ 1.01
GTF3C2-214ENST00000622534 LMTK2Q8IWU2 1503 aa21.37■■□□□ 1.01
GTF3C2-214ENST00000622534 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.35■■□□□ 1.015e-7■■□□□ 11.7
GTF3C2-214ENST00000622534 GGT6Q6P531 493 aa21.34■■□□□ 1.01
GTF3C2-214ENST00000622534 SLC4A1APQ9BWU0 796 aaKnown RBP21.34■■□□□ 1.01
GTF3C2-214ENST00000622534 CLSPNQ9HAW4 1339 aa21.32■■□□□ 1
GTF3C2-214ENST00000622534 ZC3H13Q5T200 1668 aaKnown RBP21.32■■□□□ 1
GTF3C2-214ENST00000622534 ABCC3O15438 1527 aa21.31■■□□□ 1
GTF3C2-214ENST00000622534 TET3O43151 1660 aa21.3■■□□□ 1
GTF3C2-214ENST00000622534 CCER1Q8TC90 406 aaPredicted RBP21.3■■□□□ 1
GTF3C2-214ENST00000622534 ARID4BQ4LE39 1312 aaPredicted RBP21.29■■□□□ 1
GTF3C2-214ENST00000622534 WASHC2CQ9Y4E1 1318 aa21.28■■□□□ 1
GTF3C2-214ENST00000622534 PKD2Q13563 968 aa21.27■■□□□ 1
GTF3C2-214ENST00000622534 EFCAB6Q5THR3 1501 aa21.26■□□□□ 0.99
GTF3C2-214ENST00000622534 CEP152O94986 1710 aa21.25■□□□□ 0.99
GTF3C2-214ENST00000622534 ARHGAP31Q2M1Z3 1444 aa21.25■□□□□ 0.99
GTF3C2-214ENST00000622534 RPRD2Q5VT52 1461 aaKnown RBP21.24■□□□□ 0.99
GTF3C2-214ENST00000622534 CAMSAP1Q5T5Y3 1602 aa21.23■□□□□ 0.99
GTF3C2-214ENST00000622534 CNTLNQ9NXG0 1405 aa21.23■□□□□ 0.99
GTF3C2-214ENST00000622534 ANKRD30BQ9BXX2 1392 aa21.22■□□□□ 0.99
GTF3C2-214ENST00000622534 E9PCH4 1651 aa21.22■□□□□ 0.99
GTF3C2-214ENST00000622534 MLECQ14165 292 aa21.22■□□□□ 0.99
GTF3C2-214ENST00000622534 CLTCQ00610 1675 aaKnown RBP21.19■□□□□ 0.98
GTF3C2-214ENST00000622534 PTPRTO14522 1441 aa21.19■□□□□ 0.98
GTF3C2-214ENST00000622534 NPATQ14207 1427 aa21.19■□□□□ 0.98
GTF3C2-214ENST00000622534 MROH2AA6NES4 1674 aa21.18■□□□□ 0.98
GTF3C2-214ENST00000622534 FOXD1Q16676 465 aa21.18■□□□□ 0.98
GTF3C2-214ENST00000622534 ESF1Q9H501 851 aaKnown RBP21.18■□□□□ 0.98
GTF3C2-214ENST00000622534 ADAMTSL3P82987 1691 aa21.15■□□□□ 0.98
GTF3C2-214ENST00000622534 PLA2R1Q13018 1463 aa21.15■□□□□ 0.98
GTF3C2-214ENST00000622534 TRPM2O94759 1503 aa21.13■□□□□ 0.97
GTF3C2-214ENST00000622534 FER1L4A9Z1Z3 1794 aa21.13■□□□□ 0.97
GTF3C2-214ENST00000622534 ZMYM3Q14202 1370 aa21.13■□□□□ 0.97
GTF3C2-214ENST00000622534 NOS1P29475 1434 aa21.12■□□□□ 0.97
GTF3C2-214ENST00000622534 SPHKAPQ2M3C7 1700 aa21.12■□□□□ 0.97
GTF3C2-214ENST00000622534 MADDQ8WXG6 1647 aa21.09■□□□□ 0.97
GTF3C2-214ENST00000622534 ERVK-7P63135 1459 aa21.08■□□□□ 0.97
GTF3C2-214ENST00000622534 SPATA31D1Q6ZQQ2 1576 aa21.08■□□□□ 0.97
GTF3C2-214ENST00000622534 PREX1Q8TCU6 1659 aa21.08■□□□□ 0.96
GTF3C2-214ENST00000622534 CCDC144AA2RUR9 1427 aa21.08■□□□□ 0.96
GTF3C2-214ENST00000622534 SIN3AQ96ST3 1273 aa21.07■□□□□ 0.96
GTF3C2-214ENST00000622534 TIMELESSQ9UNS1 1208 aa21.05■□□□□ 0.96
GTF3C2-214ENST00000622534 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
GTF3C2-214ENST00000622534 SYNMO15061 1565 aa21.04■□□□□ 0.96
GTF3C2-214ENST00000622534 C3P01024 1663 aa21.04■□□□□ 0.96
GTF3C2-214ENST00000622534 RIMS1Q86UR5 1692 aaKnown RBP21.03■□□□□ 0.96
GTF3C2-214ENST00000622534 PIK3C2BO00750 1634 aa21.03■□□□□ 0.96
GTF3C2-214ENST00000622534 CLTCL1P53675 1640 aa21.02■□□□□ 0.96
GTF3C2-214ENST00000622534 FBXO31Q5XUX0 539 aaPredicted RBP21.02■□□□□ 0.96
GTF3C2-214ENST00000622534 SLC52A1Q9NWF4 448 aa21.02■□□□□ 0.96
GTF3C2-214ENST00000622534 NEURL4Q96JN8 1562 aa21.02■□□□□ 0.96
GTF3C2-214ENST00000622534 NEUROD1Q13562 356 aa21.01■□□□□ 0.95
GTF3C2-214ENST00000622534 UGGT1Q9NYU2 1555 aa20.97■□□□□ 0.95
GTF3C2-214ENST00000622534 TNRQ92752 1358 aa20.97■□□□□ 0.95
GTF3C2-214ENST00000622534 SPATA31E1Q6ZUB1 1445 aa20.97■□□□□ 0.95
GTF3C2-214ENST00000622534 CFAP65Q6ZU64 1925 aaKnown RBP20.96■□□□□ 0.95
GTF3C2-214ENST00000622534 PTPRMP28827 1452 aa20.96■□□□□ 0.95
GTF3C2-214ENST00000622534 CEBPAP49715 358 aaPredicted RBP20.96■□□□□ 0.95
GTF3C2-214ENST00000622534 TONSLQ96HA7 1378 aa20.95■□□□□ 0.94
GTF3C2-214ENST00000622534 IDI1Q13907 227 aa20.94■□□□□ 0.94
GTF3C2-214ENST00000622534 ADGRB3O60242 1522 aa20.93■□□□□ 0.94
GTF3C2-214ENST00000622534 NLRP1Q9C000 1473 aa20.93■□□□□ 0.94
GTF3C2-214ENST00000622534 KIF1BO60333 1816 aa20.92■□□□□ 0.94
GTF3C2-214ENST00000622534 KDM4FA0A1W2PPD8 638 aa20.91■□□□□ 0.94
GTF3C2-214ENST00000622534 KDM5AP29375 1690 aaKnown RBP20.9■□□□□ 0.94
GTF3C2-214ENST00000622534 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.93
GTF3C2-214ENST00000622534 TMEM131LA2VDJ0 1609 aa20.89■□□□□ 0.93
GTF3C2-214ENST00000622534 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
GTF3C2-214ENST00000622534 RPGRIP1LQ68CZ1 1315 aa20.86■□□□□ 0.93
GTF3C2-214ENST00000622534 MYO3AQ8NEV4 1616 aa20.85■□□□□ 0.93
GTF3C2-214ENST00000622534 A2ML1A8K2U0 1454 aa20.84■□□□□ 0.93
GTF3C2-214ENST00000622534 PPP1R15AO75807 674 aaPredicted RBP20.84■□□□□ 0.93
GTF3C2-214ENST00000622534 RGL3Q3MIN7 710 aa20.84■□□□□ 0.93
GTF3C2-214ENST00000622534 CHGAP10645 457 aaKnown RBP20.82■□□□□ 0.92
GTF3C2-214ENST00000622534 SETD1BQ9UPS6 1966 aaKnown RBP20.82■□□□□ 0.92
GTF3C2-214ENST00000622534 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
GTF3C2-214ENST00000622534 UBR1Q8IWV7 1749 aa20.81■□□□□ 0.92
GTF3C2-214ENST00000622534 UHRF1BP1Q6BDS2 1440 aa20.81■□□□□ 0.92
GTF3C2-214ENST00000622534 IFT172Q9UG01 1749 aa20.8■□□□□ 0.92
GTF3C2-214ENST00000622534 ZNF142P52746 1687 aaPredicted RBP20.8■□□□□ 0.92
GTF3C2-214ENST00000622534 MYOM2P54296 1465 aa20.8■□□□□ 0.92
GTF3C2-214ENST00000622534 DCAF11Q8TEB1 546 aa20.8■□□□□ 0.92
GTF3C2-214ENST00000622534 STAG3Q9UJ98 1225 aa20.8■□□□□ 0.92
GTF3C2-214ENST00000622534 CEP170BQ9Y4F5 1589 aaPredicted RBP20.8■□□□□ 0.92
GTF3C2-214ENST00000622534 ZNF326Q5BKZ1 582 aaKnown RBP20.79■□□□□ 0.92
GTF3C2-214ENST00000622534 NEXMIFQ5QGS0 1516 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms