RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 PKNOX2Q96KN3 472 aa28.63■■■□□ 2.17
PCSK6-220ENST00000622483 CRBNQ96SW2 442 aa28.6■■■□□ 2.17
PCSK6-220ENST00000622483 ABCC5O15440 1437 aa28.59■■■□□ 2.17
PCSK6-220ENST00000622483 MS4A1P11836 297 aa28.58■■■□□ 2.17
PCSK6-220ENST00000622483 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.56■■■□□ 2.161e-6■□□□□ 11
PCSK6-220ENST00000622483 RSPH6AQ9H0K4 717 aa28.55■■■□□ 2.16
PCSK6-220ENST00000622483 TSPY4P0CV99 314 aa28.55■■■□□ 2.16
PCSK6-220ENST00000622483 TSPY10P0CW01 314 aa28.55■■■□□ 2.16
PCSK6-220ENST00000622483 CLASP1Q7Z460 1538 aa28.54■■■□□ 2.16
PCSK6-220ENST00000622483 DAPK1P53355 1430 aa28.54■■■□□ 2.16
PCSK6-220ENST00000622483 KDM6BO15054 1643 aa28.54■■■□□ 2.16
PCSK6-220ENST00000622483 C20orf194Q5TEA3 1177 aa28.54■■■□□ 2.16
PCSK6-220ENST00000622483 SLC4A1APQ9BWU0 796 aaKnown RBP28.54■■■□□ 2.16
PCSK6-220ENST00000622483 RGS3P49796 1198 aa28.53■■■□□ 2.16
PCSK6-220ENST00000622483 CAMSAP2Q08AD1 1489 aa28.53■■■□□ 2.16
PCSK6-220ENST00000622483 MIA2Q96PC5 1412 aa28.52■■■□□ 2.16
PCSK6-220ENST00000622483 POGKQ9P215 609 aa28.49■■■□□ 2.15
PCSK6-220ENST00000622483 NPM1P06748 294 aaKnown RBP eCLIP28.48■■■□□ 2.15
PCSK6-220ENST00000622483 VSIG10Q8N0Z9 540 aa28.48■■■□□ 2.15
PCSK6-220ENST00000622483 SPATA31E1Q6ZUB1 1445 aa28.48■■■□□ 2.15
PCSK6-220ENST00000622483 SHROOM2Q13796 1616 aa28.47■■■□□ 2.15
PCSK6-220ENST00000622483 FAM43AQ8N2R8 423 aa28.47■■■□□ 2.15
PCSK6-220ENST00000622483 RRAGDQ9NQL2 400 aaPredicted RBP28.47■■■□□ 2.15
PCSK6-220ENST00000622483 AFAP1Q8N556 730 aa28.46■■■□□ 2.15
PCSK6-220ENST00000622483 USP47Q96K76 1375 aa28.45■■■□□ 2.14
PCSK6-220ENST00000622483 ABCC2Q92887 1545 aa28.43■■■□□ 2.14
PCSK6-220ENST00000622483 TCOF1Q13428 1488 aaKnown RBP28.43■■■□□ 2.14
PCSK6-220ENST00000622483 ABCC10Q5T3U5 1492 aa28.4■■■□□ 2.14
PCSK6-220ENST00000622483 SLKQ9H2G2 1235 aaPredicted RBP28.4■■■□□ 2.14
PCSK6-220ENST00000622483 KDM2AQ9Y2K7 1162 aa28.39■■■□□ 2.14
PCSK6-220ENST00000622483 ARHGAP5Q13017 1502 aa28.38■■■□□ 2.13
PCSK6-220ENST00000622483 NAP1L5Q96NT1 182 aaPredicted RBP28.37■■■□□ 2.13
PCSK6-220ENST00000622483 ANKRD30BQ9BXX2 1392 aa28.37■■■□□ 2.13
PCSK6-220ENST00000622483 ARID4BQ4LE39 1312 aaPredicted RBP28.35■■■□□ 2.13
PCSK6-220ENST00000622483 TTC37Q6PGP7 1564 aa28.35■■■□□ 2.13
PCSK6-220ENST00000622483 ZMYND15Q9H091 742 aa28.34■■■□□ 2.13
PCSK6-220ENST00000622483 C8orf34Q49A92 452 aa28.33■■■□□ 2.13
PCSK6-220ENST00000622483 PKD2Q13563 968 aa28.32■■■□□ 2.12
PCSK6-220ENST00000622483 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.31■■■□□ 2.125e-6■■■■□ 20.8
PCSK6-220ENST00000622483 TEX14Q8IWB6 1497 aa28.31■■■□□ 2.12
PCSK6-220ENST00000622483 EFCAB2Q5VUJ9 269 aa28.3■■■□□ 2.12
PCSK6-220ENST00000622483 CARD11Q9BXL7 1154 aa28.3■■■□□ 2.12
PCSK6-220ENST00000622483 MYBBP1AQ9BQG0 1328 aaKnown RBP28.3■■■□□ 2.12
PCSK6-220ENST00000622483 ST20-MTHFSA0A0A6YYL1 179 aa28.3■■■□□ 2.12
PCSK6-220ENST00000622483 FAM161AQ3B820 660 aa28.3■■■□□ 2.12
PCSK6-220ENST00000622483 BCORL1Q5H9F3 1711 aa28.3■■■□□ 2.12
PCSK6-220ENST00000622483 CDC42BPAQ5VT25 1732 aa28.3■■■□□ 2.12
PCSK6-220ENST00000622483 RPRD2Q5VT52 1461 aaKnown RBP28.3■■■□□ 2.12
PCSK6-220ENST00000622483 C9orf84Q5VXU9 1444 aa28.29■■■□□ 2.12
PCSK6-220ENST00000622483 CC2D1BQ5T0F9 858 aaKnown RBP28.29■■■□□ 2.12
PCSK6-220ENST00000622483 ZCCHC11Q5TAX3 1644 aaKnown RBP28.28■■■□□ 2.12
PCSK6-220ENST00000622483 ANKRD30AQ9BXX3 1397 aa28.28■■■□□ 2.12
PCSK6-220ENST00000622483 NUP155O75694 1391 aa28.27■■■□□ 2.12
PCSK6-220ENST00000622483 LRPPRCP42704 1394 aaKnown RBP28.27■■■□□ 2.12
PCSK6-220ENST00000622483 GZF1Q9H116 711 aaPredicted RBP28.27■■■□□ 2.12
PCSK6-220ENST00000622483 KIF15Q9NS87 1388 aa28.26■■■□□ 2.12
PCSK6-220ENST00000622483 ADCY10Q96PN6 1610 aa28.26■■■□□ 2.12
PCSK6-220ENST00000622483 SPRYD3Q8NCJ5 442 aa28.25■■■□□ 2.11
PCSK6-220ENST00000622483 SYCP2Q9BX26 1530 aa28.24■■■□□ 2.11
PCSK6-220ENST00000622483 ASXL2Q76L83 1435 aa28.24■■■□□ 2.11
PCSK6-220ENST00000622483 ANKRD50Q9ULJ7 1429 aa28.24■■■□□ 2.11
PCSK6-220ENST00000622483 DNMT1P26358 1616 aaKnown RBP28.23■■■□□ 2.11
PCSK6-220ENST00000622483 GLIPR1L2Q4G1C9 344 aa28.21■■■□□ 2.11
PCSK6-220ENST00000622483 BRD4O60885 1362 aaPredicted RBP28.19■■■□□ 2.1
PCSK6-220ENST00000622483 PANK2Q9BZ23 570 aa28.18■■■□□ 2.1
PCSK6-220ENST00000622483 TRAPPC8Q9Y2L5 1435 aa28.18■■■□□ 2.1
PCSK6-220ENST00000622483 SAMD9LQ8IVG5 1584 aa28.18■■■□□ 2.1
PCSK6-220ENST00000622483 ARHGEF12Q9NZN5 1544 aa28.18■■■□□ 2.1
PCSK6-220ENST00000622483 MBD5Q9P267 1494 aa28.18■■■□□ 2.1
PCSK6-220ENST00000622483 RGL3Q3MIN7 710 aa28.17■■■□□ 2.1
PCSK6-220ENST00000622483 KTN1Q86UP2 1357 aaKnown RBP28.17■■■□□ 2.1
PCSK6-220ENST00000622483 ITSN2Q9NZM3 1697 aa28.17■■■□□ 2.1
PCSK6-220ENST00000622483 CDC42BPBQ9Y5S2 1711 aa28.16■■■□□ 2.1
PCSK6-220ENST00000622483 KDM2BQ8NHM5 1336 aa28.16■■■□□ 2.1
PCSK6-220ENST00000622483 HSP90AA2PQ14568 343 aaPredicted RBP28.15■■■□□ 2.1
PCSK6-220ENST00000622483 RALBP1Q15311 655 aa28.15■■■□□ 2.1
PCSK6-220ENST00000622483 NLRP13Q86W25 1043 aa28.15■■■□□ 2.1
PCSK6-220ENST00000622483 RAPGEF3O95398 923 aa28.15■■■□□ 2.1
PCSK6-220ENST00000622483 SEC24BO95487 1268 aa28.15■■■□□ 2.1
PCSK6-220ENST00000622483 ROCK1Q13464 1354 aa28.14■■■□□ 2.1
PCSK6-220ENST00000622483 PDE3BQ13370 1112 aa28.14■■■□□ 2.1
PCSK6-220ENST00000622483 CENPQQ7L2Z9 268 aaPredicted RBP28.14■■■□□ 2.09
PCSK6-220ENST00000622483 PNNQ9H307 717 aaKnown RBP28.13■■■□□ 2.09
PCSK6-220ENST00000622483 SPAG9O60271 1321 aaKnown RBP28.13■■■□□ 2.09
PCSK6-220ENST00000622483 WDR7Q9Y4E6 1490 aa28.13■■■□□ 2.09
PCSK6-220ENST00000622483 SENP3Q9H4L4 574 aaPredicted RBP28.12■■■□□ 2.09
PCSK6-220ENST00000622483 PLCH2O75038 1416 aa28.11■■■□□ 2.09
PCSK6-220ENST00000622483 CCDC141Q6ZP82 1450 aa28.08■■■□□ 2.09
PCSK6-220ENST00000622483 UHRF1BP1LA0JNW5 1464 aa28.07■■■□□ 2.08
PCSK6-220ENST00000622483 SCAPERQ9BY12 1400 aa28.07■■■□□ 2.08
PCSK6-220ENST00000622483 HSP90AA1P07900 732 aaKnown RBP28.07■■■□□ 2.08
PCSK6-220ENST00000622483 XRCC6P12956 609 aaKnown RBP eCLIP28.05■■■□□ 2.08
PCSK6-220ENST00000622483 GCC2Q8IWJ2 1684 aa28.05■■■□□ 2.08
PCSK6-220ENST00000622483 FAM69CQ0P6D2 419 aa28.05■■■□□ 2.08
PCSK6-220ENST00000622483 PLEKHH2Q8IVE3 1493 aa28.05■■■□□ 2.08
PCSK6-220ENST00000622483 POLR1AO95602 1720 aaPredicted RBP28.04■■■□□ 2.08
PCSK6-220ENST00000622483 KIF3BO15066 747 aa28.04■■■□□ 2.08
PCSK6-220ENST00000622483 FANCAO15360 1455 aa28.03■■■□□ 2.08
PCSK6-220ENST00000622483 PREX2Q70Z35 1606 aa28.02■■■□□ 2.08
PCSK6-220ENST00000622483 ROCK2O75116 1388 aaKnown RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms