RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-223ENST00000622098 CCDC141Q6ZP82 1450 aa23.93■■□□□ 1.42
CDK16-223ENST00000622098 FAM135AQ9P2D6 1515 aa23.92■■□□□ 1.42
CDK16-223ENST00000622098 MYBBP1AQ9BQG0 1328 aaKnown RBP23.92■■□□□ 1.42
CDK16-223ENST00000622098 SAMD9LQ8IVG5 1584 aa23.91■■□□□ 1.42
CDK16-223ENST00000622098 CCDC136Q96JN2 1154 aa23.9■■□□□ 1.42
CDK16-223ENST00000622098 RALBP1Q15311 655 aa23.9■■□□□ 1.42
CDK16-223ENST00000622098 BRD4O60885 1362 aaPredicted RBP23.9■■□□□ 1.42
CDK16-223ENST00000622098 RGL3Q3MIN7 710 aa23.89■■□□□ 1.42
CDK16-223ENST00000622098 CCDC144AA2RUR9 1427 aa23.89■■□□□ 1.41
CDK16-223ENST00000622098 LRPPRCP42704 1394 aaKnown RBP23.88■■□□□ 1.41
CDK16-223ENST00000622098 CDC42BPBQ9Y5S2 1711 aa23.88■■□□□ 1.41
CDK16-223ENST00000622098 KTN1Q86UP2 1357 aaKnown RBP23.87■■□□□ 1.41
CDK16-223ENST00000622098 RSPH4AQ5TD94 716 aa23.86■■□□□ 1.41
CDK16-223ENST00000622098 PREX2Q70Z35 1606 aa23.85■■□□□ 1.41
CDK16-223ENST00000622098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.85■■□□□ 1.412e-6■□□□□ 9.3
CDK16-223ENST00000622098 PRAG1Q86YV5 1406 aa23.85■■□□□ 1.41
CDK16-223ENST00000622098 NBPF1Q3BBV0 1214 aa23.84■■□□□ 1.41
CDK16-223ENST00000622098 E9PCH4 1651 aa23.83■■□□□ 1.41
CDK16-223ENST00000622098 SYCP2Q9BX26 1530 aa23.82■■□□□ 1.4
CDK16-223ENST00000622098 TRPM1Q7Z4N2 1603 aa23.81■■□□□ 1.4
CDK16-223ENST00000622098 SALL2Q9Y467 1007 aaPredicted RBP23.8■■□□□ 1.4
CDK16-223ENST00000622098 NLRP13Q86W25 1043 aa23.79■■□□□ 1.4
CDK16-223ENST00000622098 ARHGAP5Q13017 1502 aa23.79■■□□□ 1.4
CDK16-223ENST00000622098 PLA2R1Q13018 1463 aa23.79■■□□□ 1.4
CDK16-223ENST00000622098 PARD3Q8TEW0 1356 aa23.77■■□□□ 1.4
CDK16-223ENST00000622098 A2MP01023 1474 aa23.76■■□□□ 1.39
CDK16-223ENST00000622098 TTC37Q6PGP7 1564 aa23.76■■□□□ 1.39
CDK16-223ENST00000622098 PER1O15534 1290 aaPredicted RBP23.75■■□□□ 1.39
CDK16-223ENST00000622098 UNC13BO14795 1591 aa23.74■■□□□ 1.39
CDK16-223ENST00000622098 GPRASP1Q5JY77 1395 aa23.73■■□□□ 1.39
CDK16-223ENST00000622098 RRP1P56182 461 aaKnown RBP23.73■■□□□ 1.39
CDK16-223ENST00000622098 PLEKHH2Q8IVE3 1493 aa23.72■■□□□ 1.39
CDK16-223ENST00000622098 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.72■■□□□ 1.396e-6■■■■□ 21.5
CDK16-223ENST00000622098 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
CDK16-223ENST00000622098 CC2D1BQ5T0F9 858 aaKnown RBP23.71■■□□□ 1.39
CDK16-223ENST00000622098 MAST1Q9Y2H9 1570 aa23.71■■□□□ 1.39
CDK16-223ENST00000622098 TESK2Q96S53 571 aa23.71■■□□□ 1.39
CDK16-223ENST00000622098 RCAN3Q9UKA8 241 aa23.7■■□□□ 1.39
CDK16-223ENST00000622098 COL17A1Q9UMD9 1497 aaPredicted RBP23.7■■□□□ 1.38
CDK16-223ENST00000622098 BCL11AQ9H165 835 aa23.68■■□□□ 1.38
CDK16-223ENST00000622098 NOP58Q9Y2X3 529 aaKnown RBP23.68■■□□□ 1.38
CDK16-223ENST00000622098 PRDM15P57071 1507 aaPredicted RBP23.67■■□□□ 1.38
CDK16-223ENST00000622098 EXOC6Q8TAG9 804 aa23.67■■□□□ 1.38
CDK16-223ENST00000622098 PANK3Q9H999 370 aa23.67■■□□□ 1.38
CDK16-223ENST00000622098 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
CDK16-223ENST00000622098 PDE3BQ13370 1112 aa23.65■■□□□ 1.38
CDK16-223ENST00000622098 ERBINQ96RT1 1412 aa23.65■■□□□ 1.38
CDK16-223ENST00000622098 PLXNC1O60486 1568 aa23.65■■□□□ 1.38
CDK16-223ENST00000622098 MYO5CQ9NQX4 1742 aa23.64■■□□□ 1.38
CDK16-223ENST00000622098 CDCA7LQ96GN5 454 aa23.64■■□□□ 1.37
CDK16-223ENST00000622098 WASHC2CQ9Y4E1 1318 aa23.63■■□□□ 1.37
CDK16-223ENST00000622098 PAK3O75914 559 aaPredicted RBP23.63■■□□□ 1.37
CDK16-223ENST00000622098 TMF1P82094 1093 aa23.63■■□□□ 1.37
CDK16-223ENST00000622098 CHD1O14646 1710 aa23.63■■□□□ 1.37
CDK16-223ENST00000622098 LAMC1P11047 1609 aa23.63■■□□□ 1.37
CDK16-223ENST00000622098 ANP32AP39687 249 aaKnown RBP23.62■■□□□ 1.37
CDK16-223ENST00000622098 DUOX2Q9NRD8 1548 aa23.62■■□□□ 1.37
CDK16-223ENST00000622098 EIF2AK4Q9P2K8 1649 aaKnown RBP23.61■■□□□ 1.37
CDK16-223ENST00000622098 ABCC2Q92887 1545 aa23.59■■□□□ 1.37
CDK16-223ENST00000622098 ERCC6L2Q5T890 1561 aa23.59■■□□□ 1.37
CDK16-223ENST00000622098 ATP10AO60312 1499 aa23.59■■□□□ 1.37
CDK16-223ENST00000622098 MAGI2Q86UL8 1455 aa23.57■■□□□ 1.36
CDK16-223ENST00000622098 IPO9Q96P70 1041 aaKnown RBP23.57■■□□□ 1.36
CDK16-223ENST00000622098 SHROOM2Q13796 1616 aa23.57■■□□□ 1.36
CDK16-223ENST00000622098 BLMP54132 1417 aaPredicted RBP23.54■■□□□ 1.36
CDK16-223ENST00000622098 EFCAB2Q5VUJ9 269 aa23.54■■□□□ 1.36
CDK16-223ENST00000622098 PLCH2O75038 1416 aa23.53■■□□□ 1.36
CDK16-223ENST00000622098 NBR1Q14596 966 aa23.53■■□□□ 1.36
CDK16-223ENST00000622098 PLIN1O60240 522 aa23.53■■□□□ 1.36
CDK16-223ENST00000622098 MYT1LQ9UL68 1186 aa23.52■■□□□ 1.36
CDK16-223ENST00000622098 INSRP06213 1382 aa23.5■■□□□ 1.35
CDK16-223ENST00000622098 TRAPPC8Q9Y2L5 1435 aa23.5■■□□□ 1.35
CDK16-223ENST00000622098 RNF17Q9BXT8 1623 aaKnown RBP23.49■■□□□ 1.35
CDK16-223ENST00000622098 ZBTB47Q9UFB7 747 aaPredicted RBP23.49■■□□□ 1.35
CDK16-223ENST00000622098 TCERG1O14776 1098 aaKnown RBP23.49■■□□□ 1.35
CDK16-223ENST00000622098 ADAMTS8Q9UP79 889 aa23.48■■□□□ 1.35
CDK16-223ENST00000622098 ZMYM4Q5VZL5 1548 aa23.48■■□□□ 1.35
CDK16-223ENST00000622098 KNSTRNQ9Y448 316 aa23.47■■□□□ 1.35
CDK16-223ENST00000622098 WDR7Q9Y4E6 1490 aa23.46■■□□□ 1.35
CDK16-223ENST00000622098 ABCC1P33527 1531 aa23.46■■□□□ 1.35
CDK16-223ENST00000622098 NPM2Q86SE8 214 aaKnown RBP23.46■■□□□ 1.35
CDK16-223ENST00000622098 SPAG9O60271 1321 aaKnown RBP23.44■■□□□ 1.34
CDK16-223ENST00000622098 DEKP35659 375 aaKnown RBP23.44■■□□□ 1.34
CDK16-223ENST00000622098 AFAP1Q8N556 730 aa23.44■■□□□ 1.34
CDK16-223ENST00000622098 MADDQ8WXG6 1647 aa23.43■■□□□ 1.34
CDK16-223ENST00000622098 ZCCHC11Q5TAX3 1644 aaKnown RBP23.43■■□□□ 1.34
CDK16-223ENST00000622098 PDE4AP27815 886 aa23.43■■□□□ 1.34
CDK16-223ENST00000622098 CRBNQ96SW2 442 aa23.43■■□□□ 1.34
CDK16-223ENST00000622098 PPP2R1AP30153 589 aa23.43■■□□□ 1.34
CDK16-223ENST00000622098 WDR43Q15061 677 aaKnown RBP eCLIP23.41■■□□□ 1.34
CDK16-223ENST00000622098 AMER1Q5JTC6 1135 aaPredicted RBP23.4■■□□□ 1.34
CDK16-223ENST00000622098 IQGAP1P46940 1657 aa23.39■■□□□ 1.33
CDK16-223ENST00000622098 CDCA8Q53HL2 280 aa23.38■■□□□ 1.33
CDK16-223ENST00000622098 BACH2Q9BYV9 841 aa23.38■■□□□ 1.33
CDK16-223ENST00000622098 TRPM2O94759 1503 aa23.38■■□□□ 1.33
CDK16-223ENST00000622098 MS4A1P11836 297 aa23.38■■□□□ 1.33
CDK16-223ENST00000622098 SCAF11Q99590 1463 aaKnown RBP23.38■■□□□ 1.33
CDK16-223ENST00000622098 C20orf194Q5TEA3 1177 aa23.37■■□□□ 1.33
CDK16-223ENST00000622098 PLEKHH1Q9ULM0 1364 aa23.36■■□□□ 1.33
CDK16-223ENST00000622098 SKAP1Q86WV1 359 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms